<div dir="ltr">They are overridden in the CMakeCache then? Ie you preset them and something later changes them.<div><br></div><div>In situations like that cmake --trace is helpful. It tells cmake to spit out everything it does to the terminal. Pipe that into a file, and then grep the file for the cmake variable in question. You will be able to see what exactly set it incorrectly.</div>
<div><br></div><div>It will also be helpful to take a look at the FindMPI module itself, as that is the most likely culprit. By reading that it might become apparent.</div><div><br></div><div>good luck!</div>
<div><br></div><div class="gmail_extra"><br clear="all"><div>David E DeMarle<br>Kitware, Inc.<br>R&D Engineer<br>21 Corporate Drive<br>Clifton Park, NY 12065-8662<br>Phone: <a href="tel:518-881-4909" value="+15188814909" target="_blank">518-881-4909</a></div>
<br><br><div class="gmail_quote">On Thu, Sep 12, 2013 at 5:26 PM, Hong Yi <span dir="ltr"><<a href="mailto:hongyi@renci.org" target="_blank">hongyi@renci.org</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d">Thanks for the info, David. I did try setting all these flags you indicated when building simulation code and Catalyst Fortran example code with CMake, but
it does not seem to help. Let me know if you have any other suggestions.<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d"><u></u> <u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d">Regards,<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d">Hong<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d"><u></u> <u></u></span></p>
<p class="MsoNormal"><b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif"">From:</span></b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif""> David E DeMarle [mailto:<a href="mailto:dave.demarle@kitware.com" target="_blank">dave.demarle@kitware.com</a>]
<br>
<b>Sent:</b> Thursday, September 12, 2013 5:03 PM<br>
<b>To:</b> Hong Yi<br>
<b>Cc:</b> <a href="mailto:paraview@paraview.org" target="_blank">paraview@paraview.org</a><br>
<b>Subject:</b> Re: [Paraview] Statically linking catalyst to fortran simulation code on Titan<u></u><u></u></span></p><div><div>
<p class="MsoNormal"><u></u> <u></u></p>
<div>
<p class="MsoNormal">I preset these config flags to make sure I got the static MPI libs.<u></u><u></u></p>
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<p class="MsoNormal"><u></u> <u></u></p>
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<div>
<p class="MsoNormal">list(APPEND PARAVIEW_OPTIONS "-DBUILD_SHARED_LIBS:BOOL=OFF")<u></u><u></u></p>
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<div>
<p class="MsoNormal">list(APPEND PARAVIEW_OPTIONS "-DPARAVIEW_USE_MPI:BOOL=ON")<u></u><u></u></p>
</div>
<div>
<p class="MsoNormal">list(APPEND PARAVIEW_OPTIONS "-DMPI_INCLUDE_DIRS:STRING=/opt/cray/mpt/5.5.5/gni/mpich2-gnu/47/include")<u></u><u></u></p>
</div>
<div>
<p class="MsoNormal">list(APPEND PARAVIEW_OPTIONS "-DMPI_LIBRARY:FILEPATH=/opt/cray/mpt/5.5.5/gni/mpich2-gnu/47/lib/libmpich.a")<u></u><u></u></p>
</div>
<div>
<p class="MsoNormal">list(APPEND PARAVIEW_OPTIONS "-DMPI_EXTRA_LIBRARY:FILEPATH=/opt/cray/mpt/5.5.5/gni/mpich2-gnu/47/lib/libmpichcxx.a")<u></u><u></u></p>
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<p class="MsoNormal">list(APPEND PARAVIEW_OPTIONS "-DVTK_USE_SYSTEM_HDF5:BOOL=1")<u></u><u></u></p>
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<div>
<p class="MsoNormal"><u></u> <u></u></p>
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<div>
<p class="MsoNormal">It is likely the case that presetting these in your simulation code will make it choose the right ones too:<u></u><u></u></p>
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<div>
<div>
<p class="MsoNormal">list(APPEND PARAVIEW_OPTIONS "-DMPI_INCLUDE_DIRS:STRING=/opt/cray/mpt/5.5.5/gni/mpich2-gnu/47/include")<u></u><u></u></p>
</div>
<div>
<p class="MsoNormal">list(APPEND PARAVIEW_OPTIONS "-DMPI_LIBRARY:FILEPATH=/opt/cray/mpt/5.5.5/gni/mpich2-gnu/47/lib/libmpich.a")<u></u><u></u></p>
</div>
<div>
<p class="MsoNormal">list(APPEND PARAVIEW_OPTIONS "-DMPI_EXTRA_LIBRARY:FILEPATH=/opt/cray/mpt/5.5.5/gni/mpich2-gnu/47/lib/libmpichcxx.a")<u></u><u></u></p>
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<p class="MsoNormal"><u></u> <u></u></p>
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<div>
<p class="MsoNormal"><br clear="all">
<u></u><u></u></p>
<div>
<p class="MsoNormal">David E DeMarle<br>
Kitware, Inc.<br>
R&D Engineer<br>
21 Corporate Drive<br>
Clifton Park, NY 12065-8662<br>
Phone: <a href="tel:518-881-4909" value="+15188814909" target="_blank">518-881-4909</a><u></u><u></u></p>
</div>
<p class="MsoNormal" style="margin-bottom:12.0pt"><u></u> <u></u></p>
<div>
<p class="MsoNormal">On Thu, Sep 12, 2013 at 4:57 PM, Hong Yi <<a href="mailto:hongyi@renci.org" target="_blank">hongyi@renci.org</a>> wrote:<u></u><u></u></p>
<div>
<div>
<p class="MsoNormal">I am able to successfully build our Fortran simulation code as well as Catalyst Fortran example code linked to catalyst (built with superbuild), but the resulting executable is
not static, but have some dependencies on shared libraries such as libmpichf90_gnu_47.so.1, limxpmem.so.1, etc., which seems to be resulting from “find_package(MPI)” in CMakeLists.txt that somehow find shared mpi libraries to link to. This dependencies prevents
the executables from running on Titan compute nodes. Since paraview superbuild cross target can generate pvserver as well as other executables statically without any dependencies on other shared libraries, I have been trying to study paraview superbuild trying
to build Catalyst in-situ Fortran example code also statically without any dependencies, but have not been able to succeed. I guess one way to do it is to manually specify all those MPI static libraries in CMake, however, I have not been able to succeed due
to so many dependencies of those MPI libraries. Could anyone advise on how to achieve static linking to MPI libraries automatically by CMake via find_package(MPI)?<u></u><u></u></p>
<p class="MsoNormal"> <u></u><u></u></p>
<p class="MsoNormal">Thanks,<u></u><u></u></p>
<p class="MsoNormal">Hong
<u></u><u></u></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt"><br>
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