ITK/Release 3.12 Changed From Previous
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This release covers the period November 4, 2008 through February 28, 2009
Changes in this Release
CMakeLists.txt ENH: suppress deprecated header warnings for gcc compilers that support it. COMP: remove redundant library from TARGET_LINK_LIBRARIES. ENH: Increasing the minor release number to "11", to initiate a new development cycle. GettingStarted.txt ENH: Clarifying that depending on the shell you should use "setenv" or "export". Applications/README.txt ENH: testing CMake/CTestCustom.ctest.in COMP: suppress warnings that cannot be resolved. Code/Algorithms/itkBayesianClassifierImageFilter BUG: 8369 Use to SetVectorLength (and other output information) in the AllocateOutputs method. This should be called in the UpdateOutputInformation method so that filters down stream know the size of the vectors and other information. Added GenerateOutputInformation method to call parent and set the vector length. Added MakeOutput method to generate posteriors image. Changed AllocateOutputs to only set buffered region and call allocate. Code/Algorithms/itkBayesianClassifierImageFilter BUG: 8369 Use to SetVectorLength (and other output information) in the AllocateOutputs method. This should be called in the UpdateOutputInformation method so that filters down stream know the size of the vectors and other information. Added GenerateOutputInformation method to call parent and set the vector length. Added MakeOutput method to generate posteriors image. Changed AllocateOutputs to only set buffered region and call allocate. Code/Algorithms/itkCollidingFrontsImageFilter BUG: BUGID 0008058 Output images of filters were not consistently setting the image Directions at the same time as setting the desired output spacing and origins. Code/Algorithms/itkDeformableMesh3DFilter STYLE: according to kwstyle. Code/Algorithms/itkDeformableMesh3DFilter STYLE: according to kwstyle. Code/Algorithms/itkDeformableSimplexMesh3DBalloonForceFilter STYLE: according to kwstyle. Code/Algorithms/itkDeformableSimplexMesh3DBalloonForceFilter STYLE: according to kwstyle. Code/Algorithms/itkDeformableSimplexMesh3DFilter STYLE: according to kwstyle. Code/Algorithms/itkDeformableSimplexMesh3DFilter STYLE: according to kwstyle. Code/Algorithms/itkDemonsRegistrationFilter STYLE: according to kwstyle. Code/Algorithms/itkDemonsRegistrationFilter STYLE: according to kwstyle. Code/Algorithms/itkDemonsRegistrationFunction STYLE: according to kwstyle. Code/Algorithms/itkDemonsRegistrationFunction STYLE: according to kwstyle. Code/Algorithms/itkEuclideanDistancePointMetric STYLE: according to KWStyle. Code/Algorithms/itkEuclideanDistancePointMetr STYLE: according to KWStyle. Code/Algorithms/itkExtensionVelocitiesImageFilter STYLE: according to KWStyle. Code/Algorithms/itkExtensionVelocitiesImageFilter STYLE: according to KWStyle. Code/Algorithms/itkFEMFiniteDifferenceFunctionLoad STYLE: according to kwstyle. Code/Algorithms/itkFEMFiniteDifferenceFunctionLoad STYLE: according to kwstyle. Code/Algorithms/itkFEMRegistrationFilter STYLE: according to kwstyle. Code/Algorithms/itkFEMRegistrationFilter STYLE: according to kwstyle. Code/Algorithms/itkFFTComplexConjugateToRealImageFilter STYLE: according to kwstyle. Code/Algorithms/itkFFTComplexConjugateToRealImageFilter STYLE: according to kwstyle. Code/Algorithms/itkFFTRealToComplexConjugateImageFilter STYLE: Fix various doxygen problems. Missing documentation is tagged with a TODO. Code/Algorithms/itkFFTRealToComplexConjugateImageFilter STYLE: according to kwstyle. Code/Algorithms/itkFFTWCommon STYLE: according to kwstyle. Code/Algorithms/itkFFTWComplexConjugateToRealImageFilter STYLE: according to kwstyle. Code/Algorithms/itkFFTWComplexConjugateToRealImageFilter STYLE: according to kwstyle. Code/Algorithms/itkFFTWRealToComplexConjugateImageFilter STYLE: according to kwstyle. Code/Algorithms/itkFFTWRealToComplexConjugateImageFilter STYLE: according to kwstyle. Code/Algorithms/itkFastChamferDistanceImageFilter STYLE: according to kwstyle. Code/Algorithms/itkFastChamferDistanceImageFilter STYLE: according to kwstyle. Code/Algorithms/itkFastMarchingExtensionImageFilter STYLE: according to kwstyle. Code/Algorithms/itkFastMarchingExtensionImageFilter STYLE: according to kwstyle. Code/Algorithms/itkFastMarchingImageFilter STYLE: according to kwstyle. Code/Algorithms/itkFastMarchingImageFilter STYLE: according to kwstyle. Code/Algorithms/itkFastSymmetricForcesDemonsRegistrationFunction STYLE: according to kwstyle. Code/Algorithms/itkFastSymmetricForcesDemonsRegistrationFunction STYLE: according to kwstyle. BUG: BUGID 0008058 Output images of filters were not consistently setting the image Directions at the same time as setting the desired output spacing and origins. Code/Algorithms/itkGeodesicActiveContourLevelSetFunction STYLE: according to kwstyle. Code/Algorithms/itkGeodesicActiveContourLevelSetFunction STYLE: according to kwstyle. Code/Algorithms/itkGeodesicActiveContourLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkGeodesicActiveContourLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkGeodesicActiveContourShapePriorLevelSetFunction STYLE: according to kwstyle. Code/Algorithms/itkGeodesicActiveContourShapePriorLevelSetFunction STYLE: according to kwstyle. Code/Algorithms/itkGeodesicActiveContourShapePriorLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkGeodesicActiveContourShapePriorLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkGradientVectorFlowImageFilter ENH: Let the user give the pixel type used in the internal image. This change will make the SetLaplacianFilter() method usable in wrapitk. Code/Algorithms/itkGradientVectorFlowImageFilter ENH: Let the user give the pixel type used in the internal image. This change will make the SetLaplacianFilter() method usable in wrapitk. Code/Algorithms/itkHistogramAlgorithmBase STYLE: according to kwstyle. Code/Algorithms/itkHistogramAlgorithmBase STYLE: according to kwstyle. Code/Algorithms/itkHistogramImageToImageMetric STYLE: according to kwstyle. Code/Algorithms/itkHistogramImageToImageMetr STYLE: according to kwstyle. Code/Algorithms/itkHistogramMatchingImageFilter STYLE: according to kwstyle. Code/Algorithms/itkHistogramMatchingImageFilter STYLE: according to kwstyle. Code/Algorithms/itkImageClassifierBase STYLE: according to kwstyle. Code/Algorithms/itkImageClassifierBase STYLE: according to kwstyle. Code/Algorithms/itkImageGaussianModelEstimator STYLE: according to kwstyle. Code/Algorithms/itkImageGaussianModelEstimator STYLE: according to kwstyle. Code/Algorithms/itkImageKmeansModelEstimator STYLE: according to kwstyle. Code/Algorithms/itkImageKmeansModelEstimator STYLE: according to kwstyle. Code/Algorithms/itkImageModelEstimatorBase STYLE: according to kwstyle. Code/Algorithms/itkImageModelEstimatorBase STYLE: according to kwstyle. Code/Algorithms/itkImageMomentsCalculator STYLE: according to kwstyle. Code/Algorithms/itkImageMomentsCalculator STYLE: according to kwstyle. Code/Algorithms/itkImagePCADecompositionCalculator STYLE: according to kwstyle. Code/Algorithms/itkImagePCADecompositionCalculator STYLE: according to kwstyle. Code/Algorithms/itkImagePCAShapeModelEstimator STYLE: according to kwstyle. Code/Algorithms/itkImagePCAShapeModelEstimator STYLE: according to kwstyle. Code/Algorithms/itkImageRegistrationMethod STYLE: according to kwstyle. Code/Algorithms/itkImageRegistrationMethod STYLE: according to kwstyle. Code/Algorithms/itkImageShapeModelEstimatorBase STYLE: according to kwstyle. Code/Algorithms/itkImageShapeModelEstimatorBase STYLE: according to kwstyle. Code/Algorithms/itkImageToSpatialObjectMetric STYLE: according to kwstyle. Code/Algorithms/itkImageToSpatialObjectMetr STYLE: according to kwstyle. Code/Algorithms/itkImageToSpatialObjectRegistrationMethod STYLE: according to kwstyle. Code/Algorithms/itkImageToSpatialObjectRegistrationMethod STYLE: according to kwstyle. Code/Algorithms/itkIsolatedWatershedImageFilter STYLE: according to kwstyle. Code/Algorithms/itkIsolatedWatershedImageFilter STYLE: according to kwstyle. Code/Algorithms/itkIsotropicFourthOrderLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkIsotropicFourthOrderLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkKLMRegionGrowImageFilter STYLE: according to kwstyle. Code/Algorithms/itkKLMRegionGrowImageFilter STYLE: according to kwstyle. Code/Algorithms/itkKalmanLinearEstimator STYLE: according to kwstyle. Code/Algorithms/itkKappaStatisticImageToImageMetric STYLE: according to kwstyle. Code/Algorithms/itkKappaStatisticImageToImageMetr STYLE: according to kwstyle. Code/Algorithms/itkKullbackLeiblerCompareHistogramImageToImageMetric STYLE: according to kwstyle. Code/Algorithms/itkLabelVotingImageFilter STYLE: according to kwstyle. Code/Algorithms/itkLabelVotingImageFilter STYLE: according to kwstyle. Code/Algorithms/itkLaplacianSegmentationLevelSetFunction STYLE: according to kwstyle. Code/Algorithms/itkLaplacianSegmentationLevelSetFunction STYLE: according to kwstyle. Code/Algorithms/itkLaplacianSegmentationLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkLaplacianSegmentationLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkLevelSetMotionRegistrationFilter STYLE: according to kwstyle. Code/Algorithms/itkLevelSetMotionRegistrationFilter STYLE: according to kwstyle. Code/Algorithms/itkLevelSetMotionRegistrationFunction STYLE: according to kwstyle. Code/Algorithms/itkLevelSetMotionRegistrationFunction STYLE: according to kwstyle. Code/Algorithms/itkLevelSetNeighborhoodExtractor STYLE: according to kwstyle. Code/Algorithms/itkLevelSetNeighborhoodExtractor STYLE: according to kwstyle. Code/Algorithms/itkLevelSetVelocityNeighborhoodExtractor STYLE: according to kwstyle. Code/Algorithms/itkLevelSetVelocityNeighborhoodExtractor STYLE: according to kwstyle. Code/Algorithms/itkMIRegistrationFunction STYLE: according to kwstyle. Code/Algorithms/itkMIRegistrationFunction STYLE: according to kwstyle. BUG: (0008098) computing physical mapped location was not being computed correctly when images are treated as oriented images. Code/Algorithms/itkMRASlabIdentifier STYLE: according to kwstyle. Code/Algorithms/itkMRASlabIdentifier STYLE: according to kwstyle. Code/Algorithms/itkMRFImageFilter STYLE: according to kwstyle. Code/Algorithms/itkMRFImageFilter STYLE: according to kwstyle. Code/Algorithms/itkMRIBiasFieldCorrectionFilter STYLE: according to kwstyle. Code/Algorithms/itkMRIBiasFieldCorrectionFilter STYLE: according to kwstyle. Code/Algorithms/itkMatchCardinalityImageToImageMetric STYLE: according to kwstyle. Code/Algorithms/itkMatchCardinalityImageToImageMetr STYLE: according to kwstyle. Code/Algorithms/itkMattesMutualInformationImageToImageMetric STYLE: according to kwstyle. Code/Algorithms/itkMattesMutualInformationImageToImageMetr STYLE: according to kwstyle. COMP: shadowed variable warning Code/Algorithms/itkMeanReciprocalSquareDifferenceImageToImageMetric STYLE: according to kwstyle. Code/Algorithms/itkMeanReciprocalSquareDifferenceImageToImageMetr STYLE: according to kwstyle. Code/Algorithms/itkMeanReciprocalSquareDifferencePointSetToImageMetric STYLE: according to kwstyle. Code/Algorithms/itkMeanReciprocalSquareDifferencePointSetToImageMetr STYLE: according to kwstyle. Code/Algorithms/itkMeanSquareRegistrationFunction STYLE: according to kwstyle. Code/Algorithms/itkMeanSquareRegistrationFunction STYLE: according to kwstyle. BUG: (0008098) computing physical mapped location was not being computed correctly when images are treated as oriented images. Code/Algorithms/itkMeanSquaresHistogramImageToImageMetric STYLE: according to kwstyle. Code/Algorithms/itkMeanSquaresHistogramImageToImageMetr STYLE: according to kwstyle. Code/Algorithms/itkMeanSquaresImageToImageMetric STYLE: according to kwstyle. Code/Algorithms/itkMeanSquaresImageToImageMetr STYLE: according to kwstyle. Code/Algorithms/itkMeanSquaresPointSetToImageMetric STYLE: according to kwstyle. Code/Algorithms/itkMeanSquaresPointSetToImageMetr STYLE: according to kwstyle. Code/Algorithms/itkMedialNodePairCorrespondenceProcess STYLE: according to kwstyle. Code/Algorithms/itkMedialNodePairCorrespondenceProcess STYLE: according to kwstyle. Code/Algorithms/itkMedialNodeTripletCorrespondenceProcess STYLE: according to kwstyle. Code/Algorithms/itkMedialNodeTripletCorrespondenceProcess STYLE: according to kwstyle. Code/Algorithms/itkMinMaxCurvatureFlowFunction STYLE: according to kwstyle. Code/Algorithms/itkMinMaxCurvatureFlowFunction STYLE: according to kwstyle. Code/Algorithms/itkMinMaxCurvatureFlowImageFilter STYLE: according to kwstyle. Code/Algorithms/itkMinMaxCurvatureFlowImageFilter STYLE: according to kwstyle. Code/Algorithms/itkMultiResolutionImageRegistrationMethod STYLE: according to kwstyle. Code/Algorithms/itkMultiResolutionImageRegistrationMethod STYLE: according to kwstyle. Code/Algorithms/itkMultiResolutionPDEDeformableRegistration STYLE: according to kwstyle. Code/Algorithms/itkMultiResolutionPDEDeformableRegistration STYLE: according to kwstyle. Code/Algorithms/itkMultiResolutionPyramidImageFilter STYLE: Fixed documentation to reflect bug fix changes. Code/Algorithms/itkMultiResolutionPyramidImageFilter STYLE: according to kwstyle. BUG: 0008275 Resolved issue to preserve center of mass of the images at all levels of the image pyramid. Code/Algorithms/itkMutualInformationHistogramImageToImageMetric STYLE: according to kwstyle. Code/Algorithms/itkMutualInformationHistogramImageToImageMetr STYLE: according to kwstyle. Code/Algorithms/itkMutualInformationImageToImageMetric STYLE: according to kwstyle. Code/Algorithms/itkMutualInformationImageToImageMetr STYLE: according to kwstyle. Code/Algorithms/itkNCCRegistrationFunction STYLE: according to kwstyle. Code/Algorithms/itkNCCRegistrationFunction STYLE: according to kwstyle. Code/Algorithms/itkNarrowBandCurvesLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkNarrowBandCurvesLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkNarrowBandLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkNarrowBandLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkNarrowBandThresholdSegmentationLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkNarrowBandThresholdSegmentationLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkNormalizedCorrelationImageToImageMetric STYLE: according to kwstyle. Code/Algorithms/itkNormalizedCorrelationImageToImageMetr STYLE: according to kwstyle. Code/Algorithms/itkNormalizedCorrelationPointSetToImageMetric STYLE: according to kwstyle. Code/Algorithms/itkNormalizedCorrelationPointSetToImageMetr STYLE: according to kwstyle. Code/Algorithms/itkNormalizedMutualInformationHistogramImageToImageMetric STYLE: according to kwstyle. Code/Algorithms/itkNormalizedMutualInformationHistogramImageToImageMetr STYLE: according to kwstyle. Code/Algorithms/itkOtsuMultipleThresholdsCalculator STYLE: according to kwstyle. Code/Algorithms/itkOtsuMultipleThresholdsCalculator STYLE: according to kwstyle. Code/Algorithms/itkOtsuMultipleThresholdsImageFilter STYLE: according to kwstyle. Code/Algorithms/itkOtsuMultipleThresholdsImageFilter STYLE: according to kwstyle. Code/Algorithms/itkOtsuThresholdImageCalculator STYLE: according to kwstyle. Code/Algorithms/itkOtsuThresholdImageCalculator STYLE: according to kwstyle. Code/Algorithms/itkOtsuThresholdImageFilter STYLE: according to kwstyle. Code/Algorithms/itkOtsuThresholdImageFilter STYLE: according to kwstyle. Code/Algorithms/itkPDEDeformableRegistrationFilter STYLE: according to kwstyle. Code/Algorithms/itkPDEDeformableRegistrationFilter STYLE: according to kwstyle. Code/Algorithms/itkPDEDeformableRegistrationFunction STYLE: according to kwstyle. Code/Algorithms/itkPointSetToImageMetric STYLE: according to kwstyle. Code/Algorithms/itkPointSetToImageMetr STYLE: according to kwstyle. Code/Algorithms/itkPointSetToImageRegistrationMethod STYLE: according to kwstyle. Code/Algorithms/itkPointSetToImageRegistrationMethod STYLE: according to kwstyle. Code/Algorithms/itkPointSetToPointSetMetric STYLE: according to kwstyle. Code/Algorithms/itkPointSetToPointSetMetr STYLE: according to kwstyle. Code/Algorithms/itkPointSetToPointSetRegistrationMethod STYLE: according to kwstyle. Code/Algorithms/itkPointSetToPointSetRegistrationMethod STYLE: according to kwstyle. Code/Algorithms/itkPointSetToSpatialObjectDemonsRegistration STYLE: according to kwstyle. Code/Algorithms/itkPointSetToSpatialObjectDemonsRegistration STYLE: according to kwstyle. Code/Algorithms/itkRGBGibbsPriorFilter STYLE: according to kwstyle. Code/Algorithms/itkRGBGibbsPriorFilter STYLE: according to kwstyle. Code/Algorithms/itkRayCastInterpolateImageFunction STYLE: according to kwstyle. Code/Algorithms/itkRecursiveMultiResolutionPyramidImageFilter STYLE: according to kwstyle. Code/Algorithms/itkRecursiveMultiResolutionPyramidImageFilter STYLE: according to kwstyle. Code/Algorithms/itkRegionGrowImageFilter STYLE: according to kwstyle. Code/Algorithms/itkRegionGrowImageFilter STYLE: according to kwstyle. Code/Algorithms/itkRegularSphereMeshSource STYLE: according to kwstyle. Code/Algorithms/itkRegularSphereMeshSource STYLE: according to kwstyle. BUG: Pass PointData to the output Mesh Code/Algorithms/itkReinitializeLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkReinitializeLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkSCSLComplexConjugateToRealImageFilter STYLE: according to kwstyle. Code/Algorithms/itkSCSLComplexConjugateToRealImageFilter STYLE: according to kwstyle. Code/Algorithms/itkSCSLRealToComplexConjugateImageFilter STYLE: according to kwstyle. Code/Algorithms/itkSCSLRealToComplexConjugateImageFilter STYLE: according to kwstyle. Code/Algorithms/itkSTAPLEImageFilter STYLE: according to kwstyle. Code/Algorithms/itkSTAPLEImageFilter STYLE: according to kwstyle. Code/Algorithms/itkScalarImageKmeansImageFilter STYLE: according to kwstyle. Code/Algorithms/itkScalarImageKmeansImageFilter STYLE: according to kwstyle. Code/Algorithms/itkSegmentationLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkSegmentationLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkShapeDetectionLevelSetFunction STYLE: according to kwstyle. Code/Algorithms/itkShapeDetectionLevelSetFunction STYLE: according to kwstyle. Code/Algorithms/itkShapeDetectionLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkShapeDetectionLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkShapePriorMAPCostFunction STYLE: according to kwstyle. Code/Algorithms/itkShapePriorMAPCostFunction STYLE: according to kwstyle. Code/Algorithms/itkShapePriorMAPCostFunctionBase STYLE: according to kwstyle. Code/Algorithms/itkShapePriorMAPCostFunctionBase STYLE: according to kwstyle. Code/Algorithms/itkShapePriorSegmentationLevelSetFunction STYLE: according to kwstyle. Code/Algorithms/itkShapePriorSegmentationLevelSetFunction STYLE: according to kwstyle. Code/Algorithms/itkShapePriorSegmentationLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkShapePriorSegmentationLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkSphereMeshSource STYLE: according to kwstyle. Code/Algorithms/itkSphereMeshSource STYLE: according to kwstyle. Code/Algorithms/itkStructHashFunction STYLE: according to kwstyle. Code/Algorithms/itkSymmetricForcesDemonsRegistrationFilter STYLE: according to kwstyle. Code/Algorithms/itkSymmetricForcesDemonsRegistrationFilter STYLE: according to kwstyle. Code/Algorithms/itkSymmetricForcesDemonsRegistrationFunction STYLE: according to kwstyle. Code/Algorithms/itkSymmetricForcesDemonsRegistrationFunction STYLE: according to kwstyle. BUG: (0008098) Final change to needed fix orientation preserving code. These changes fix an inproper refactoring. Code/Algorithms/itkThresholdSegmentationLevelSetFunction STYLE: according to kwstyle. Code/Algorithms/itkThresholdSegmentationLevelSetFunction STYLE: according to kwstyle. Code/Algorithms/itkThresholdSegmentationLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkThresholdSegmentationLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkUnaryMedialNodeMetric STYLE: according to kwstyle. Code/Algorithms/itkUnaryMedialNodeMetr STYLE: according to kwstyle. Code/Algorithms/itkUnsharpMaskLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkUnsharpMaskLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkVectorThresholdSegmentationLevelSetFunction STYLE: according to kwstyle. Code/Algorithms/itkVectorThresholdSegmentationLevelSetFunction STYLE: according to kwstyle. Code/Algorithms/itkVectorThresholdSegmentationLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkVectorThresholdSegmentationLevelSetImageFilter STYLE: according to kwstyle. Code/Algorithms/itkVnlFFTComplexConjugateToRealImageFilter STYLE: according to kwstyle. STYLE: according to kwstyle. Code/Algorithms/itkVnlFFTComplexConjugateToRealImageFilter STYLE: according to kwstyle. Code/Algorithms/itkVnlFFTRealToComplexConjugateImageFilter STYLE: according to kwstyle. STYLE: according to kwstyle. Code/Algorithms/itkVnlFFTRealToComplexConjugateImageFilter STYLE: according to kwstyle. Code/Algorithms/itkVoronoiDiagram2D STYLE: according to kwstyle. Code/Algorithms/itkVoronoiDiagram2D STYLE: according to kwstyle. Code/Algorithms/itkVoronoiDiagram2DGenerator STYLE: according to kwstyle. Code/Algorithms/itkVoronoiDiagram2DGenerator STYLE: according to kwstyle. Code/Algorithms/itkVoronoiPartitioningImageFilter STYLE: according to kwstyle. Code/Algorithms/itkVoronoiPartitioningImageFilter STYLE: according to kwstyle. Code/Algorithms/itkVoronoiSegmentationImageFilter STYLE: according to kwstyle. Code/Algorithms/itkVoronoiSegmentationImageFilter STYLE: according to kwstyle. Code/Algorithms/itkVoronoiSegmentationImageFilterBase STYLE: according to kwstyle. Code/Algorithms/itkVoronoiSegmentationImageFilterBase STYLE: according to kwstyle. Code/Algorithms/itkVoronoiSegmentationRGBImageFilter STYLE: according to kwstyle. Code/Algorithms/itkVoronoiSegmentationRGBImageFilter STYLE: according to kwstyle. Code/Algorithms/itkWatershedBoundary STYLE: according to kwstyle. Code/Algorithms/itkWatershedBoundary STYLE: according to kwstyle. Code/Algorithms/itkWatershedBoundaryResolver STYLE: according to kwstyle. Code/Algorithms/itkWatershedBoundaryResolver STYLE: according to kwstyle. Code/Algorithms/itkWatershedEquivalenceRelabeler STYLE: according to kwstyle. Code/Algorithms/itkWatershedEquivalenceRelabeler STYLE: according to kwstyle. Code/Algorithms/itkWatershedImageFilter STYLE: according to kwstyle. Code/Algorithms/itkWatershedImageFilter STYLE: according to kwstyle. Code/Algorithms/itkWatershedMiniPipelineProgressCommand STYLE: according to kwstyle. Code/Algorithms/itkWatershedMiniPipelineProgressCommand STYLE: according to kwstyle. Code/Algorithms/itkWatershedRelabeler STYLE: according to kwstyle. Code/Algorithms/itkWatershedRelabeler STYLE: according to kwstyle. Code/Algorithms/itkWatershedSegmentTable STYLE: according to kwstyle. Code/Algorithms/itkWatershedSegmentTable STYLE: according to kwstyle. Code/Algorithms/itkWatershedSegmentTree STYLE: according to kwstyle. Code/Algorithms/itkWatershedSegmentTreeGenerator STYLE: according to kwstyle. Code/Algorithms/itkWatershedSegmentTreeGenerator STYLE: according to kwstyle. Code/Algorithms/itkWatershedSegmenter STYLE: according to kwstyle. Code/Algorithms/itkWatershedSegmenter STYLE: according to kwstyle. Code/BasicFilters/itkAdaptiveHistogramEqualizationImageFilter STYLE: according to kwstyle. Code/BasicFilters/itkBSplineDecompositionImageFilter STYLE: Various doxygen fixes. Code/BasicFilters/itkBSplineInterpolateImageFunction COMP: Fix non implemented operator= error while build wrapitk unstable with tcl. BUG: If images are now using image direction information, then set the m_UseImageDirection to true instead as the default. Code/BasicFilters/itkBSplineInterpolateImageFunction BUG: If images are now using image direction information, then set the m_UseImageDirection to true instead as the default. Code/BasicFilters/itkBSplineUpsampleImageFilter STYLE: Various doxygen fixes. Code/BasicFilters/itkBinaryProjectionImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/BasicFilters/itkBinaryThresholdProjectionImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/BasicFilters/itkBlackTopHatImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/BasicFilters/itkBlackTopHatImageFilter Code/BasicFilters/itkCannyEdgeDetectionImageFilter BUG: 7219 Fixed SetMaximumError Code/BasicFilters/itkClosingByReconstructionImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/BasicFilters/itkCompose2DCovariantVectorImageFilter STYLE: Various doxygen fixes. Code/BasicFilters/itkCompose2DVectorImageFilter STYLE: Various doxygen fixes. Code/BasicFilters/itkCompose3DCovariantVectorImageFilter STYLE: Various doxygen fixes. Code/BasicFilters/itkCompose3DVectorImageFilter STYLE: Various doxygen fixes. Code/BasicFilters/itkComposeRGBImageFilter STYLE: Various doxygen fixes. Code/BasicFilters/itkConnectedComponentImageFilter BUG: BackgroundValue is for output image only. That bug was found by Julien Michel and reported the ITK users mailing list. COMP: Fixing warning about type conversion in pixel type. Code/BasicFilters/itkConnectedThresholdImageFilter Code/BasicFilters/itkConnectedThresholdImageFilter COMP: The new floodfill iterator should only be used if ITK_USE_REVIEW is ON. Code/BasicFilters/itkDiscreteGaussianImageFilter STYLE: Fixed spelling errors. Code/BasicFilters/itkDisplacementFieldJacobianDeterminantFilter BUG: Modified time was not being set for UseImageSpacingOn() method. Code/BasicFilters/itkExtractImageFilter BUG: 0008066 A temporary hack is put into place that produces an image with incorrect direction, but no longer throws an exception, This is allowing other more pressing issues to be addressed. Code/BasicFilters/itkGaussianImageSource Code/BasicFilters/itkGaussianImageSource Code/BasicFilters/itkGradientImageFilter STYLE: according to kwstyle. Code/BasicFilters/itkGradientImageFilter BUG: If images are now using image direction information, then set the m_UseImageDirection to true instead as the default. Code/BasicFilters/itkGradientMagnitudeRecursiveGaussianImageFilter BUG: #8472. Image information is set to default values by filter. Added a CopyInformation to propagate input image information to output image information. Augmented test to check for propgation of image information. Code/BasicFilters/itkGradientRecursiveGaussianImageFilter STYLE: according to kwstyle. Code/BasicFilters/itkGradientRecursiveGaussianImageFilter BUG: If images are now using image direction information, then set the m_UseImageDirection to true instead as the default. Code/BasicFilters/itkGrayscaleMorphologicalClosingImageFilter Code/BasicFilters/itkGrayscaleMorphologicalClosingImageFilter Code/BasicFilters/itkGrayscaleMorphologicalOpeningImageFilter Code/BasicFilters/itkGrayscaleMorphologicalOpeningImageFilter Code/BasicFilters/itkHessianRecursiveGaussianImageFilter Code/BasicFilters/itkHoughTransform2DCirclesImageFilter BUG: BUGID 0008058 Output images of filters were not consistently setting the image Directions at the same time as setting the desired output spacing and origins. Code/BasicFilters/itkHoughTransform2DLinesImageFilter BUG: BUGID 0008058 Output images of filters were not consistently setting the image Directions at the same time as setting the desired output spacing and origins. Code/BasicFilters/itkImageToVectorImageFilter BUG: 8369 SetVector is not called in GenerateOutputInformation ENH: SetNthInput has been deprecated. Replace it with SetInput. Code/BasicFilters/itkImageToVectorImageFilter BUG: 8369 SetVector is not called in GenerateOutputInformation Code/BasicFilters/itkInvertIntensityImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/BasicFilters/itkIterativeInverseDeformationFieldImageFilter BUG: BUGID 0008058 Output images of filters were not consistently setting the image Directions at the same time as setting the desired output spacing and origins. Code/BasicFilters/itkMaskImageFilter Code/BasicFilters/itkMaskNegatedImageFilter Code/BasicFilters/itkMaximumProjectionImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/BasicFilters/itkMeanProjectionImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/BasicFilters/itkMedianProjectionImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/BasicFilters/itkMinimumProjectionImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/BasicFilters/itkModulusImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/BasicFilters/itkMorphologicalGradientImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/BasicFilters/itkObjectMorphologyImageFilter BUG: Assigning a boundary condition for input image to output image - won't compile if output image type is not the same as input image type Code/BasicFilters/itkOpeningByReconstructionImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/BasicFilters/itkPointSetToImageFilter STYLE: Fixing coding style. Code/BasicFilters/itkPointSetToImageFilter BUG: BUGID 0008058 Output images of filters were not consistently setting the image Directions at the same time as setting the desired output spacing and origins. Code/BasicFilters/itkPolylineMask2DImageFilter BUG: BUGID 0008058 Output images of filters were not consistently setting the image Directions at the same time as setting the desired output spacing and origins. Code/BasicFilters/itkPolylineMaskImageFilter BUG: BUGID 0008058 Output images of filters were not consistently setting the image Directions at the same time as setting the desired output spacing and origins. Code/BasicFilters/itkProjectionImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/BasicFilters/itkRegionOfInterestImageFilter Code/BasicFilters/itkResampleImageFilter BUG: OutputStartIndex was not set when using SetOutputParametersFromImage. Code/BasicFilters/itkResampleImageFilter BUG: fix to bug 0008104, Resample and OptResample fail to compile when TInputImage is different from TOutputImage and SetReferenceImage is used Code/BasicFilters/itkShrinkImageFilter Code/BasicFilters/itkShrinkImageFilter Code/BasicFilters/itkSignedMaurerDistanceMapImageFilter STYLE: Various doxygen fixes. Code/BasicFilters/itkSparseFieldLayer STYLE: Various doxygen fixes. Code/BasicFilters/itkStandardDeviationProjectionImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/BasicFilters/itkStreamingImageFilter BUG: 8457 overloaded PropagateRequestedRegion method to remove extraneous execution of propagating requested region up the pipeline Code/BasicFilters/itkStreamingImageFilter BUG: 8457 overloaded PropagateRequestedRegion method to remove extraneous execution of propagating requested region up the pipeline Code/BasicFilters/itkSumProjectionImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/BasicFilters/itkSymmetricEigenAnalysisImageFilter STYLE: Fixing documentation, removing obsolete comments referring to fractional anisotropy. Code/BasicFilters/itkWhiteTopHatImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/BasicFilters/itkWhiteTopHatImageFilter Code/Common/CMakeLists.txt Code/Common/itkBSplineDeformableTransform BUG: BUGID 0008058 Output images of filters were not consistently setting the image Directions at the same time as setting the desired output spacing and origins. Code/Common/itkCentralDifferenceImageFunction BUG: If images are now using image direction information, then set the m_UseImageDirection to true instead as the default. Code/Common/itkCentralDifferenceImageFunction BUG: If images are now using image direction information, then set the m_UseImageDirection to true instead as the default. Code/Common/itkConceptChecking COMP: Fixed unused var warning COMP: Fixed unused var warning Code/Common/itkCovariantVector COMP: remove unneeded and redundant constructors. ENH: Implicit casting in the constructor from another covariant vector of a different scalar type. Code/Common/itkDataObject STYLE: according to kwstyle. Code/Common/itkDenseFiniteDifferenceImageFilter BUG: BUGID 0008058 Output images of filters were not consistently setting the image Directions at the same time as setting the desired output spacing and origins. Code/Common/itkEuler2DTransform STYLE: according to kwstyle. Code/Common/itkFiniteCylinderSpatialFunction STYLE: according to kwstyle. Code/Common/itkFiniteDifferenceImageFilter STYLE: according to kwstyle. Code/Common/itkFiniteDifferenceSparseImageFilter STYLE: according to kwstyle. Code/Common/itkFiniteDifferenceSparseImageFunction STYLE: according to kwstyle. Code/Common/itkFloodFilledFunctionConditionalConstIterator STYLE: according to kwstyle. Code/Common/itkFloodFilledSpatialFunctionConditionalIterator STYLE: according to kwstyle. Code/Common/itkGaussianBlurImageFunction STYLE: according to kwstyle. Code/Common/itkGaussianDerivativeImageFunction STYLE: according to kwstyle. Code/Common/itkGaussianDerivativeSpatialFunction STYLE: according to kwstyle. Code/Common/itkGaussianOperator STYLE: Improving code clarity. Code/Common/itkIdentityTransform STYLE: according to kwstyle. Code/Common/itkImage STYLE: according to kwstyle. Code/Common/itkImageBase BUG: 8490: ImageBase::Initialized method modifies it's MTime requiring pipelines to re-executed. Added InitializeBufferedRegion method which does not call Modify as a protected method Code/Common/itkImageBase BUG: 8490: ImageBase::Initialized method modifies it's MTime requiring pipelines to re-executed. Added InitializeBufferedRegion method which does not call Modify as a protected method Code/Common/itkImageRandomNonRepeatingConstIteratorWithIndex STYLE: according to kwstyle. Code/Common/itkImageSliceConstIteratorWithIndex STYLE: according to kwstyle. Code/Common/itkImageSliceConstIteratorWithIndex STYLE: according to kwstyle. Code/Common/itkImageSliceIteratorWithIndex STYLE: according to kwstyle. Code/Common/itkImageSliceIteratorWithIndex STYLE: according to kwstyle. Code/Common/itkImageSource STYLE: according to kwstyle. Code/Common/itkImageSource STYLE: according to kwstyle. Code/Common/itkImageToImageFilter STYLE: according to kwstyle. Code/Common/itkImageToImageFilter STYLE: according to kwstyle. Code/Common/itkImageToImageFilterDetail STYLE: according to kwstyle. Code/Common/itkImageTransformHelper STYLE: according to kwstyle. Code/Common/itkImportImageContainer STYLE: according to kwstyle. Code/Common/itkImportImageContainer STYLE: according to kwstyle. Code/Common/itkInOrderTreeIterator STYLE: according to kwstyle. Code/Common/itkInPlaceImageFilter STYLE: according to kwstyle. Code/Common/itkInPlaceImageFilter STYLE: according to kwstyle. Code/Common/itkIndent STYLE: according to kwstyle. Code/Common/itkIndex STYLE: according to kwstyle. Code/Common/itkIndexedContainerInterface STYLE: according to kwstyle. Code/Common/itkIntTypes STYLE: according to kwstyle. Code/Common/itkInteriorExteriorSpatialFunction STYLE: according to kwstyle. Code/Common/itkIterationReporter STYLE: according to kwstyle. Code/Common/itkKLMSegmentationBorder STYLE: according to kwstyle. Code/Common/itkKLMSegmentationBorder STYLE: according to kwstyle. Code/Common/itkKLMSegmentationRegion STYLE: according to kwstyle. Code/Common/itkKernelFunction STYLE: according to kwstyle. Code/Common/itkKernelTransform STYLE: according to kwstyle. Code/Common/itkKernelTransform STYLE: according to kwstyle. Code/Common/itkLandmarkBasedTransformInitializer STYLE: according to kwstyle. Code/Common/itkLandmarkBasedTransformInitializer STYLE: according to kwstyle. Code/Common/itkLaplacianOperator STYLE: according to kwstyle. Code/Common/itkLaplacianOperator STYLE: according to kwstyle. Code/Common/itkLeafTreeIterator STYLE: according to kwstyle. Code/Common/itkLevelOrderTreeIterator STYLE: according to kwstyle. Code/Common/itkLevelSet STYLE: according to kwstyle. Code/Common/itkLevelSetFunction STYLE: according to kwstyle. Code/Common/itkLevelSetFunction STYLE: according to kwstyle. Code/Common/itkLevelSetNode STYLE: according to kwstyle. Code/Common/itkLightObject STYLE: according to kwstyle. Code/Common/itkLightObject STYLE: according to kwstyle. Code/Common/itkLightProcessObject STYLE: according to kwstyle. Code/Common/itkLightProcessObject STYLE: according to kwstyle. Code/Common/itkLineCell STYLE: according to kwstyle. Code/Common/itkLineCell STYLE: according to kwstyle. Code/Common/itkLineConstIterator STYLE: according to kwstyle. Code/Common/itkLineIterator STYLE: according to kwstyle. Code/Common/itkLinearInterpolateImageFunction STYLE: according to kwstyle. Code/Common/itkLog10ImageAdaptor STYLE: according to kwstyle. Code/Common/itkLogImageAdaptor STYLE: according to kwstyle. Code/Common/itkLogOutput STYLE: according to kwstyle. Code/Common/Attic/itkLogger STYLE: according to kwstyle. Code/Common/itkLogger STYLE: according to kwstyle. Code/Common/itkLoggerManager STYLE: according to kwstyle. Code/Common/itkLoggerManager STYLE: according to kwstyle. Code/Common/itkLoggerOutput STYLE: according to kwstyle. Code/Common/itkLoggerOutput STYLE: according to kwstyle. Code/Common/itkLoggerThreadWrapper STYLE: according to kwstyle. Code/Common/itkLoggerThreadWrapper STYLE: according to kwstyle. Code/Common/itkMacro STYLE: according to kwstyle. Code/Common/itkMahalanobisDistanceThresholdImageFunction STYLE: according to kwstyle. Code/Common/itkMahalanobisDistanceThresholdImageFunction STYLE: according to kwstyle. Code/Common/itkMapContainer STYLE: according to kwstyle. Code/Common/itkMapContainer STYLE: according to kwstyle. Code/Common/itkMatrix STYLE: Fixing indentations. STYLE: according to kwstyle. Code/Common/itkMatrix STYLE: according to kwstyle. Code/Common/itkMatrixOffsetTransformBase STYLE: according to kwstyle. Code/Common/itkMatrixOffsetTransformBase STYLE: according to kwstyle. Code/Common/itkMatrixResizeableDataObject STYLE: according to kwstyle. Code/Common/itkMaximumDecisionRule STYLE: according to kwstyle. Code/Common/itkMaximumDecisionRule STYLE: according to kwstyle. Code/Common/itkMaximumRatioDecisionRule STYLE: according to kwstyle. Code/Common/itkMaximumRatioDecisionRule STYLE: according to kwstyle. Code/Common/itkMeanImageFunction STYLE: according to kwstyle. Code/Common/itkMeanImageFunction STYLE: according to kwstyle. Code/Common/itkMedianImageFunction STYLE: according to kwstyle. Code/Common/itkMemoryUsageObserver COMP: Mallinfo is not recognized on FreeBSD, disable it and use GetRUsage instead. BugfixID: 7947. The correct way of quiering memory is not great with GetRUsage, another way shall be found. Code/Common/itkMemoryUsageObserver STYLE: according to kwstyle. Code/Common/itkMersenneTwisterRandomVariateGenerator STYLE: according to kwstyle. Code/Common/itkMersenneTwisterRandomVariateGenerator STYLE: according to kwstyle. Code/Common/itkMeshRegion STYLE: according to kwstyle. Code/Common/itkMeshRegion STYLE: according to kwstyle. Code/Common/itkMeshSource STYLE: according to kwstyle. Code/Common/itkMeshSource STYLE: according to kwstyle. Code/Common/itkMeshToMeshFilter STYLE: according to kwstyle. Code/Common/itkMeshToMeshFilter STYLE: according to kwstyle. Code/Common/itkMetaDataDictionary STYLE: according to kwstyle. Code/Common/itkMetaDataDictionary STYLE: according to kwstyle. Code/Common/itkMetaDataObject STYLE: Fix wrong class name in doc. STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/Common/itkMetaDataObject COMP: VS6 has occasional problems compiling code that uses the MetaDataObject if this file has a namespace defined. Strange, but true. STYLE: according to kwstyle. Code/Common/itkMetaDataObjectBase STYLE: according to kwstyle. Code/Common/itkMinimumDecisionRule STYLE: according to kwstyle. Code/Common/itkMinimumDecisionRule STYLE: according to kwstyle. Code/Common/itkMultiThreader STYLE: according to kwstyle. Code/Common/itkMultiThreader STYLE: according to kwstyle. Code/Common/itkMultipleLogOutput STYLE: according to kwstyle. Code/Common/itkMultipleLogOutput STYLE: according to kwstyle. Code/Common/itkMutexLock STYLE: according to kwstyle. Code/Common/itkMutexLockHolder STYLE: according to kwstyle. Code/Common/itkNearestNeighborExtrapolateImageFunction STYLE: according to kwstyle. Code/Common/itkNearestNeighborInterpolateImageFunction STYLE: according to kwstyle. Code/Common/itkNeighborhood STYLE: Fixing indentations. Code/Common/itkNeighborhood STYLE: according to kwstyle. Code/Common/itkNeighborhoodAccessorFunctor STYLE: according to kwstyle. Code/Common/itkNeighborhoodAlgorithm STYLE: according to kwstyle. Code/Common/itkNeighborhoodAlgorithm STYLE: according to kwstyle. Code/Common/itkNeighborhoodAllocator STYLE: according to kwstyle. Code/Common/itkNeighborhoodBinaryThresholdImageFunction STYLE: according to kwstyle. Code/Common/itkNeighborhoodInnerProduct STYLE: according to kwstyle. Code/Common/itkNeighborhoodInnerProduct STYLE: according to kwstyle. Code/Common/itkNeighborhoodIterator STYLE: according to kwstyle. Code/Common/itkNeighborhoodIterator STYLE: according to kwstyle. Code/Common/itkNeighborhoodOperator STYLE: according to kwstyle. Code/Common/itkNeighborhoodOperator STYLE: according to kwstyle. Code/Common/itkNeighborhoodOperatorImageFunction STYLE: according to kwstyle. Code/Common/itkNeighborhoodOperatorImageFunction STYLE: according to kwstyle. Code/Common/itkNodeList STYLE: according to kwstyle. Code/Common/itkNonUniformBSpline STYLE: according to kwstyle. Code/Common/itkNonUniformBSpline STYLE: according to kwstyle. Code/Common/itkNthElementImageAdaptor STYLE: according to kwstyle. Code/Common/itkNthElementPixelAccessor STYLE: according to kwstyle. Code/Common/itkNumericTraits STYLE: Fixing indentations. insight-users/2008-November/028098.html and reported at http://public.kitware.com/Bug/view.php?id=8213. Requested by Denis Shamonin. Code/Common/itkNumericTraitsCovariantVectorPixel STYLE: according to kwstyle. Code/Common/itkNumericTraitsFixedArrayPixel STYLE: according to kwstyle. Code/Common/itkNumericTraitsRGBAPixel STYLE: according to kwstyle. Code/Common/itkNumericTraitsRGBPixel STYLE: according to kwstyle. Code/Common/itkNumericTraitsTensorPixel STYLE: according to kwstyle. Code/Common/itkNumericTraitsTensorPixel STYLE: according to kwstyle. Code/Common/itkNumericTraitsVariableLengthVectorPixel STYLE: according to kwstyle. Code/Common/itkNumericTraitsVectorPixel STYLE: according to kwstyle. COMP: #7750. No ScalarRealType defined for unsigned long in several numeric traits. Code/Common/itkObject STYLE: according to kwstyle. Code/Common/itkObject STYLE: according to kwstyle. Code/Common/itkObjectFactory STYLE: according to kwstyle. Code/Common/itkObjectStore STYLE: according to kwstyle. Code/Common/itkObjectStore STYLE: according to kwstyle. Code/Common/itkOctree STYLE: according to kwstyle. Code/Common/itkOctree STYLE: according to kwstyle. Code/Common/itkOctreeNode STYLE: according to kwstyle. Code/Common/itkOctreeNode STYLE: according to kwstyle. Code/Common/itkOffset STYLE: according to kwstyle. Code/Common/itkOneWayEquivalencyTable STYLE: according to kwstyle. Code/Common/itkOrientationAdapter STYLE: according to kwstyle. Code/Common/itkOrientedImage STYLE: according to kwstyle. Code/Common/itkOrientedImage STYLE: according to kwstyle. Code/Common/itkOrthogonallyCorrected2DParametricPa STYLE: according to kwstyle. Code/Common/itkOrthogonallyCorrected2DParametricPath STYLE: according to kwstyle. Code/Common/itkOutputWindow STYLE: according to kwstyle. Code/Common/itkPCAShapeSignedDistanceFunction STYLE: according to kwstyle. Code/Common/itkPCAShapeSignedDistanceFunction STYLE: according to kwstyle. Code/Common/itkParametricPa STYLE: according to kwstyle. Code/Common/itkParametricPath STYLE: according to kwstyle. Code/Common/itkParametricPa STYLE: according to kwstyle. Code/Common/itkPathAndImageToPathFilter STYLE: according to kwstyle. Code/Common/itkPathConstIterator STYLE: according to kwstyle. Code/Common/itkPathFunctions STYLE: according to kwstyle. Code/Common/itkPathIterator STYLE: according to kwstyle. Code/Common/itkPathIterator STYLE: according to kwstyle. Code/Common/itkPathToPathFilter STYLE: according to kwstyle. Code/Common/itkPathToPathFilter STYLE: according to kwstyle. Code/Common/itkPeriodicBoundaryCondition STYLE: according to kwstyle. Code/Common/itkPhasedArray3DSpecialCoordinatesImage STYLE: according to kwstyle. Code/Common/itkPixelAccessor STYLE: according to kwstyle. Code/Common/itkPixelTraits STYLE: according to kwstyle. Code/Common/itkPoint COMP: remove unneeded and redundant constructors. Code/Common/itkResourceProbesCollectorBase Code/Common/itkResourceProbesCollectorBase COMP: For VS6, allow normal operation of this class if built with BUILD_SHARED_LIBS OFF. The class is still a dummy class for VS6 is built with BUILD_SHARED_LIBS ON. Code/Common/itkRigid2DTransform STYLE: Various doxygen fixes. Code/Common/itkRigid2DTransform BUG: 0008320 Two versions of modifications that pass regression test were found, but wrong version was submitted. This patch should be more backwards compatible by continuing to directly affect the offset, and then computing the m_Translation value that is consistent with that version. Either patch works when m_Translation = m_Offset (which is the only thing that is tested). Code/Common/itkRigid3DTransform BUG: 0008320 Two versions of modifications that pass regression test were found, but wrong version was submitted. This patch should be more backwards compatible by continuing to directly affect the offset, and then computing the m_Translation value that is consistent with that version. Either patch works when m_Translation = m_Offset (which is the only thing that is tested). Code/Common/itkTestMain ENH: Improved error reporting when an exception is part of the testing framework itself. Code/Common/itkTimeStamp private/insight-developers/2009-February/011732.html for more detail Code/Common/itkVersor BUG: 0008312 Resolved issue related to proper processing of singularities that occur when converting between itkVersor and a RotationMatirx. Code/Common/itkZeroFluxNeumannBoundaryCondition STYLE: according to kwstyle. Code/Common/itk_alloc STYLE: according to kwstyle. Code/Common/itk_hash_map STYLE: according to kwstyle. Code/Common/itk_hash_set STYLE: according to kwstyle. Code/Common/itk_hashtable STYLE: according to kwstyle. Code/Common/itk_hashtable STYLE: according to kwstyle. BUG: over aggressive removal of semicolons during style repair. Code/IO/CMakeLists.txt COMP: removed redundant library. Code/IO/itkAnalyzeImageIO Code/IO/itkAnalyzeImageIO Code/IO/itkBrains2MaskImageIO COMP: VS6 compiler bug workaround. Code/IO/itkDICOMImageIO2 ENH: removing message to cerr if the file could not be read to be consistent with other IO objects Code/IO/itkGDCMImageIO BUG: Put a finer differentiation on the version number at 1.2.3 Code/IO/itkGDCMImageIO STYLE: try to cleanup doxygen output Code/IO/itkIOCommon Code/IO/itkImageFileReader BUG: 8436 changed RegionIOCovert to include index paramerter Code/IO/itkImageFileWriter ENH: streaming for ImageFileWriter with collaboration from ImageIOBase Code/IO/itkImageFileWriter BUG: 8436 correct origin of offset index, changed RegionIOCovert to include index paramerter STYLE: cleaned up extra typedefs ENH: streaming for ImageFileWriter with collaboration from ImageIOBase Code/IO/itkImageIOBase ENH: added printing of m_Origin to PrintSelf method Code/IO/itkImageIOBase ENH: streaming for ImageFileWriter with collaboration from ImageIOBase Code/IO/itkImageIORegion COMP: Borland warning. Variable assigned a value that is never used. Code/IO/itkImageIORegion BUG: 8436 changed RegionIOCovert to include index paramerter, made old method depricated ENH: added typedefs of IndexType and SizeType and made the type match that of ImageRegion STYLE: Remove unnecessary trailing backslash. Code/IO/itkImageSeriesReader ENH:: added m_UseStreaming member variable for streaming Code/IO/itkImageSeriesReader COMP: Addressing warning about potential use of origin uninitialized. ENH:: Added streaming support, moved the reading of the MetaDataDictionaryArray to the GenerateOutputInformation method Code/IO/itkMetaImageIO BUG: itkMetaIOTestShouldFail was failing, added checking of return value for ReadROI, WriteROI and Write. If it's and error then an exception is thrown. Aslo fixed a bug released to checking m_IORegion againse the largest region to determin if we were requested to stream COMP: fixed unused variable for GetSplitRegionForWriting BUG: When writing an ROI, maxIndex should point to the last pixel to write - not beyond it. Code/IO/itkMetaImageIO BUG: Fixed tests for canstreamread and canstreamwrite Code/IO/itkSpatialObjectReader STYLE: Fix various doxygen problems. Missing documentation is tagged with a TODO. Code/IO/itkSpatialObjectWriter STYLE: Fix various doxygen problems. Missing documentation is tagged with a TODO. Code/IO/itkTestDriver ENH: Improved error reporting when an exception is part of the testing framework itself. Code/IO/itkTransformFileReader STYLE: Fix various doxygen problems. Missing documentation is tagged with a TODO. Code/IO/itkTransformFileWriter STYLE: Fix various doxygen problems. Missing documentation is tagged with a TODO. Code/Numerics/itkAmoebaOptimizer STYLE: testing. STYLE: testing. Code/Numerics/itkExhaustiveOptimizer STYLE: according to kwstyle. Code/Numerics/itkLBFGSBOptimizer STYLE: according to kwstyle. Code/Numerics/itkMultipleValuedVnlCostFunctionAdaptor STYLE: according to kwstyle. Code/Numerics/itkMultivariateLegendrePolynomial STYLE: Improve latex formula for doxygen documentation Code/Numerics/itkPowellOptimizer STYLE: according to kwstyle. Code/Numerics/itkSPSAOptimizer STYLE: according to kwstyle. Code/Numerics/itkSPSAOptimizer STYLE: remove unnecessary semicolon STYLE: extras ;'s. Code/Numerics/FEM/itkFEM STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement1DStress STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement1DStress STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearLine STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearLine STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearLineStress STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearLineStress STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearQuadrilateral STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearQuadrilateral STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearQuadrilateralMembrane STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearQuadrilateralMembrane STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearQuadrilateralStrain STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearQuadrilateralStrain STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearQuadrilateralStress STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearQuadrilateralStress STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearTriangular STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearTriangular STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearTriangularMembrane STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearTriangularMembrane STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearTriangularStrain STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearTriangularStrain STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearTriangularStress STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0LinearTriangularStress STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0QuadraticTriangular STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0QuadraticTriangular STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0QuadraticTriangularStrain STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0QuadraticTriangularStrain STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0QuadraticTriangularStress STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC0QuadraticTriangularStress STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC1Beam STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DC1Beam STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DMembrane STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DMembrane STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DStrain STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DStrain STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElement2DStress STYLE: According to kwstyle. Code/Numerics/FEM/itkFEMElement2DStress STYLE: According to kwstyle. Code/Numerics/FEM/itkFEMElement3DC0LinearHexahedron STYLE: According to kwstyle. Code/Numerics/FEM/itkFEMElement3DC0LinearHexahedron STYLE: According to kwstyle. Code/Numerics/FEM/itkFEMElement3DC0LinearHexahedronMembrane STYLE: According to kwstyle. Code/Numerics/FEM/itkFEMElement3DC0LinearHexahedronMembrane STYLE: According to kwstyle. Code/Numerics/FEM/itkFEMElement3DC0LinearHexahedronStrain STYLE: According to kwstyle. Code/Numerics/FEM/itkFEMElement3DC0LinearHexahedronStrain STYLE: According to kwstyle. Code/Numerics/FEM/itkFEMElement3DC0LinearTetrahedron STYLE: According to kwstyle. Code/Numerics/FEM/itkFEMElement3DC0LinearTetrahedron STYLE: According to kwstyle. Code/Numerics/FEM/itkFEMElement3DC0LinearTetrahedronMembrane STYLE: According to kwstyle. Code/Numerics/FEM/itkFEMElement3DC0LinearTetrahedronMembrane STYLE: According to kwstyle. Code/Numerics/FEM/itkFEMElement3DC0LinearTetrahedronStrain STYLE: According to kwstyle. Code/Numerics/FEM/itkFEMElement3DC0LinearTetrahedronStrain STYLE: According to kwstyle. Code/Numerics/FEM/itkFEMElement3DMembrane STYLE: According to kwstyle. Code/Numerics/FEM/itkFEMElement3DMembrane STYLE: According to kwstyle. Code/Numerics/FEM/itkFEMElement3DStrain STYLE: According to kwstyle. Code/Numerics/FEM/itkFEMElement3DStrain STYLE: According to kwstyle. Code/Numerics/FEM/itkFEMElementBase STYLE: According to kwstyle. Code/Numerics/FEM/itkFEMElementBase STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElementStd STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElementStd STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMElements STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMException STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMException STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMGenerateMe STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMGenerateMesh STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMImageMetricLoad STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMImageMetricLoad STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMImageMetricLoadImplementation STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMInitialization STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMInitialization STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMItpackSparseMatrix STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMItpackSparseMatrix STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLightObject STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLightObject STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLinearSystemWrapper STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLinearSystemWrapper STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLinearSystemWrapperDenseVNL STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLinearSystemWrapperDenseVNL STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLinearSystemWrapperItpack STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLinearSystemWrapperItpack STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLinearSystemWrapperVNL STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLinearSystemWrapperVNL STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLinearSystemWrappers STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadBC STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadBC STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadBCMFC STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadBCMFC STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadBase STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadBase STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadEdge STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadEdge STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadElementBase STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadElementBase STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadGrav STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadGrav STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadImplementationGenericBodyLoad STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadImplementationGenericBodyLoad STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadImplementationGenericLandmarkLoad STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadImplementationGenericLandmarkLoad STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadImplementationTest STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadImplementationsRegister STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadLandmark STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadLandmark STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadNode STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadNode STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadPoint STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadPoint STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoadTest STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMLoads STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMMacro STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMMaterialBase STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMMaterialBase STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMMaterialLinearElasticity STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMMaterialLinearElasticity STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMMaterials STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMObjectFactory STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMP STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMPArray STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMSolution STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMSolver STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMSolver STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMSolverCrankNicolson STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMSolverCrankNicolson STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMSolverHyperbol STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMSolverHyperbolic STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMUtility STYLE: according to kwstyle. Code/Numerics/FEM/itkFEMUtility STYLE: according to kwstyle. Code/Numerics/FEM/itkVisitorDispatcher STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkBackPropagationLayer STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkBackPropagationLayer STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkBatchSupervisedTrainingFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkCompletelyConnectedWeightSet STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkErrorBackPropagationLearningFunctionBase STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkErrorBackPropagationLearningFunctionBase STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkErrorBackPropagationLearningWithMomentum STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkErrorBackPropagationLearningWithMomentum STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkErrorFunctionBase STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkGaussianRadialBasisFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkGaussianRadialBasisFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkGaussianTransferFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkHardLimitTransferFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkIdentityTransferFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkInputFunctionBase STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkIterativeSupervisedTrainingFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkLayerBase STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkLayerBase STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkLearningFunctionBase STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkLogSigmoidTransferFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkMeanSquaredErrorFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkMeanSquaredErrorFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkMultilayerNeuralNetworkBase STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkMultilayerNeuralNetworkBase STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkMultiquadricRadialBasisFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkNNetDistanceMetricBase STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkNeuralNetworkObject STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkNeuralNetworkObject STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkOneHiddenLayerBackPropagationNeuralNetwork STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkOneHiddenLayerBackPropagationNeuralNetwork STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkProductInputFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkQuickPropLearningRule STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkQuickPropLearningRule STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkRBFBackPropagationLearningFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkRBFBackPropagationLearningFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkRBFLayer STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkRBFLayer STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkRBFNetwork STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkRadialBasisFunctionBase STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkRadialBasisFunctionBase STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkSigmoidTransferFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkSignedHardLimitTransferFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkSquaredDifferenceErrorFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkSquaredDifferenceErrorFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkSumInputFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkSymmetricSigmoidTransferFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkTanHTransferFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkTanSigmoidTransferFunction STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkTrainingFunctionBase STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkTransferFunctionBase STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkTwoHiddenLayerBackPropagationNeuralNetwork STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkTwoHiddenLayerBackPropagationNeuralNetwork STYLE: according to kwstyle. Code/Numerics/NeuralNetworks/itkWeightSetBase STYLE: according to kwstyle. Code/Numerics/Statistics/itkHistogram COMP: Superclass was not redefined. Code/Numerics/Statistics/itkHistogramToEntropyImageFilter ENH: Let the user choose the output pixel type. Code/Numerics/Statistics/itkHistogramToIntensityImageFilter ENH: Let the user choose the output pixel type. Code/Numerics/Statistics/itkHistogramToLogProbabilityImageFilter ENH: Let the user choose the output pixel type. Code/Numerics/Statistics/itkHistogramToProbabilityImageFilter ENH: Let the user choose the output pixel type. Code/Numerics/Statistics/itkScalarImageToHistogramGenerator STYLE: Fix various doxygen problems. Missing documentation is tagged with a TODO. Code/Patented/itkActiveShapeModelCalculator STYLE: according to kwstyle. Code/Patented/itkActiveShapeModelCalculator STYLE: according to kwstyle. Code/Patented/itkActiveShapeModelGradientSearchMethod STYLE: according to kwstyle. Code/Patented/itkActiveShapeModelGradientSearchMethod STYLE: according to kwstyle. Code/Patented/itkSimpleFuzzyConnectednessImageFilterBase STYLE: according to kwstyle. Code/Patented/itkSimpleFuzzyConnectednessImageFilterBase STYLE: according to kwstyle. Code/Patented/itkSimpleFuzzyConnectednessRGBImageFilter STYLE: according to kwstyle. Code/Patented/itkSimpleFuzzyConnectednessRGBImageFilter STYLE: according to kwstyle. Code/Patented/itkSimpleFuzzyConnectednessScalarImageFilter STYLE: according to kwstyle. Code/Patented/itkSimpleFuzzyConnectednessScalarImageFilter STYLE: according to kwstyle. Code/Patented/itkVectorFuzzyConnectednessImageFilter STYLE: According to kwstyle. Code/Patented/itkVectorFuzzyConnectednessImageFilter STYLE: According to kwstyle. Code/Review/CMakeLists.txt COMP: removed redendant library. Code/Review/itkAddConstantToImageFilter insight-users/2009-February/029212.html STYLE: testing. Code/Review/itkAnchorErodeDilateLine STYLE: Testing pre-commit check Code/Review/itkAreaClosingImageFilter COMP: non-portable use of static const. non-portable use of typename. 1316 Code/Review/itkAreaOpeningImageFilter COMP: non-portable use of static const. non-portable use of typename. 1316 Code/Review/itkAttributeMorphologyBaseImageFilter COMP: non-portable use of static const. non-portable use of typename. 1316 Code/Review/itkAttributeMorphologyBaseImageFilter ENH: Decrease the memory usage of sizeof(long)*(dim-1)*nb_of_pixels and (thus) improve execution time by about 5% by computing the index from the position instead of storing it for all the pixels. Code/Review/itkBSplineScatteredDataPointSetToImageFilter BUG: BUGID 0008058 Output images of filters were not consistently setting the image Directions at the same time as setting the desired output spacing and origins. Code/Review/itkBinaryContourImageFilter publication/217 Code/Review/itkBinaryContourImageFilter publication/217 Code/Review/itkBinaryMorphologicalClosingImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/Review/itkBinaryMorphologicalClosingImageFilter Code/Review/itkBinaryMorphologicalOpeningImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/Review/itkBinaryMorphologicalOpeningImageFilter Code/Review/itkBoxImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/Review/itkComposeRGBAImageFilter insight-users/2009-February/029212.html Code/Review/itkContourExtractor2DImageFilter STYLE: various issues. Many dealing with comments. Code/Review/itkConvolutionImageFilter STYLE: Add a docstring. ENH: Add missing PrintSelf() content. Code/Review/itkConvolutionImageFilter COMP: uninitialized memory read. m_Normalize was not set properly in constructor. COMP: ImageKernel is not member data, but because of its use in the SetInputMacro, the PrintSelf check thinks it is member data. Placing a faux print in a comment resolves the issue. ENH: Thread support. ENH: Add missing PrintSelf() content. 1323 Code/Review/itkDiffeomorphicDemonsRegistrationFilter BUG: BUGID 0008058 Output images of filters were not consistently setting the image Directions at the same time as setting the desired output spacing and origins. Code/Review/itkDiscreteGaussianDerivativeImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. STYLE: various issues. Many dealing with comments. Code/Review/itkDiscreteGaussianDerivativeImageFunction STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. STYLE: various issues. Many dealing with comments. Code/Review/itkDiscreteGaussianDerivativeImageFunction STYLE: various issues. Many dealing with comments. Code/Review/itkDiscreteGradientMagnitudeGaussianImageFunction STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. STYLE: various issues. Many dealing with comments. Code/Review/itkDiscreteGradientMagnitudeGaussianImageFunction STYLE: various issues. Many dealing with comments. Code/Review/itkDiscreteHessianGaussianImageFunction STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. STYLE: Insight-Journal handle was wrong Code/Review/itkDiscreteHessianGaussianImageFunction STYLE: various issues. Many dealing with comments. Code/Review/itkDivideByConstantImageFilter insight-users/2009-February/029212.html Code/Review/itkESMDemonsRegistrationFunction STYLE: fixed identation BUG: If images are now using image direction information, then set the m_UseImageDirection to true instead as the default. Code/Review/itkESMDemonsRegistrationFunction BUG: BUGID 0008058 Output images of filters were not consistently setting the image Directions at the same time as setting the desired output spacing and origins. COMP: #warning not portable. BUG: Test for ITK_IMAGE_BEHAVES_AS_ORIENTED_IMAGE was incorrect. ENH: Better description in warning. ENH: Only throw exception if the direction of the fixed image is not identity. Code/Review/itkExponentialDeformationFieldImageFilter ENH: Added the possibility to compute the inverse deformation field with ExponentialDeformationFieldImageFilter Code/Review/itkExponentialDeformationFieldImageFilter STYLE: fixed indentation BUG: BUGID 0008058 Output images of filters were not consistently setting the image Directions at the same time as setting the desired output spacing and origins. Code/Review/itkFFTComplexToComplexImageFilter STYLE: according to kwstyle. Code/Review/itkFFTShiftImageFilter 321 Code/Review/itkFFTShiftImageFilter 321 Code/Review/itkFFTWComplexToComplexImageFilter ENH: Replacing reinterpret_cast with dynamic_cast. Code/Review/itkFastSymmetricForcesDemonsRegistrationFilter STYLE: various issues. Many dealing with comments. Code/Review/itkFastSymmetricForcesDemonsRegistrationFilter BUG: BUGID 0008058 Output images of filters were not consistently setting the image Directions at the same time as setting the desired output spacing and origins. Code/Review/itkFlatStructuringElement STYLE: various issues. Many dealing with comments. Code/Review/itkGaussianDerivativeOperator STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/Review/itkGeometricalQuadEdge ENH: optimization of release code in all QuadEdgeMesh related classes. Code/Review/itkHessianToObjectnessMeasureImageFilter COMP: Addressing compilation errors in Borland. Code/Review/itkHessianToObjectnessMeasureImageFilter COMP: Addressing warning about shadowing a type declaration for EigenValueImageType. Code/Review/itkImageKernelOperator 1323 Code/Review/itkImageKernelOperator 1323 Code/Review/itkLabelContourImageFilter publication/217 Code/Review/itkLabelContourImageFilter publication/217 Code/Review/itkLabelOverlayFunctor insight-users/2009-February/029212.html Code/Review/itkLabelToRGBFunctor insight-users/2009-February/029212.html Code/Review/itkLabelToRGBImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/Review/itkMINC2ImageIO STYLE: Remove cruft to make the function a bit easier to read. Code/Review/itkMINC2ImageIO STYLE: Remove cruft to make the function a bit easier to read. Code/Review/itkMagnitudeAndPhaseToComplexImageFilter insight-users/2009-February/029212.html Code/Review/itkMorphologicalWatershedFromMarkersImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/Review/itkMorphologicalWatershedImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/Review/itkMovingHistogramMorphologicalGradientImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/Review/itkMultiScaleHessianBasedMeasureImageFilter COMP: Fixed lack of const-correctness in the GetScalesOutput() and GetHessianOutput() methods. COMP: adding an intermediate typedef in order to help VS6.0 digest a NumericTraits expression. Code/Review/itkMultiScaleHessianBasedMeasureImageFilter COMP: Addressing warning about conversion from double to integer type. COMP: Visual Studio 6.0 doesn't have std::max(). Using vnl_math_max() instead. ENH: print out missed ivars Code/Review/itkMultiplyByConstantImageFilter insight-users/2009-February/029212.html Code/Review/itkOptAdaptiveHistogramEqualizationImageFilter STYLE: according to kwstyle. Code/Review/itkOptBSplineInterpolateImageFunction COMP: Fix non implemented operator= error while build wrapitk unstable with tcl. BUG: If images are now using image direction information, then set the m_UseImageDirection to true instead as the default. Code/Review/itkOptBSplineInterpolateImageFunction BUG: If images are now using image direction information, then set the m_UseImageDirection to true instead as the default. Code/Review/itkOptBinaryMorphologyImageFilter STYLE: various issues. Many dealing with comments. Code/Review/itkOptBlackTopHatImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/Review/itkOptBlackTopHatImageFilter Code/Review/itkOptGrayscaleMorphologicalClosingImageFilter Code/Review/itkOptGrayscaleMorphologicalOpeningImageFilter Code/Review/itkOptResampleImageFilter ENH: GetSplineOrder() should be const\nENH: GetDefaultPixelValue() should be const Code/Review/itkOptResampleImageFilter BUG: fix to bug 0008104, Resample and OptResample fail to compile when TInputImage is different from TOutputImage and SetReferenceImage is used Code/Review/itkOptWhiteTopHatImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/Review/itkOptWhiteTopHatImageFilter Code/Review/itkPhilipsRECImageIO BUG: The direction cosine for the 4th dimension set to 0 0 0 0 was causing an exception to be thrown. Setting the value to 0 0 0 1 fixes the problem. Code/Review/itkQuadEdge ENH: optimization of release code in all QuadEdgeMesh related classes. Code/Review/itkQuadEdge ENH: optimization of release code in all QuadEdgeMesh related classes. Code/Review/itkQuadEdgeMesh ENH: faster QE 2 QE copy. Code/Review/itkQuadEdgeMe ENH: faster QE 2 QE copy. BUG: Graft method must also copy EdgeCellsContainer. Code/Review/itkQuadEdgeMeshBaseIterator ENH: coverage. Code/Review/itkQuadEdgeMeshBorderTransform ENH: m_Radius can now be set externally, else it is computed internally Code/Review/itkQuadEdgeMeshBorderTransform ENH: m_Radius can now be set externally, else it is computed internally Code/Review/itkQuadEdgeMeshBoundaryEdgesMeshFunction STYLE: According to kwstyle. Code/Review/itkQuadEdgeMeshBoundaryEdgesMeshFunction ENH: coverage. Code/Review/itkQuadEdgeMeshCleanFilter ENH: copy of the EdgeCells container Code/Review/itkQuadEdgeMeshDecimationFilter BUG: Fix bug with tetrahedron case. STYLE: Fix typo. Code/Review/itkQuadEdgeMeshEdgeMergeDecimationFilter STYLE: use itkDebugMacro, renamed internal method... Code/Review/itkQuadEdgeMeshEdgeMergeDecimationFilter COMP: Fixing warning about unused variable when NDEBUG is defined. STYLE: use itkDebugMacro, renamed internal method... Code/Review/itkQuadEdgeMeshEulerOperatorCreateCenterVertexFunction ENH: optimization of release code in all QuadEdgeMesh related classes. Code/Review/itkQuadEdgeMeshEulerOperatorFlipEdgeFunction ENH: coverage. Code/Review/itkQuadEdgeMeshEulerOperatorFlipEdgeFunction ENH: optimization of release code in all QuadEdgeMesh related classes. Code/Review/itkQuadEdgeMeshEulerOperatorJoinFacetFunction ENH: optimization of release code in all QuadEdgeMesh related classes. Code/Review/itkQuadEdgeMeshEulerOperatorJoinVertexFunction BUG: Fix bug with tetrahedron case. STYLE: Fix typo. Code/Review/itkQuadEdgeMeshEulerOperatorJoinVertexFunction BUG: Fix bug with tetrahedron case. STYLE: Fix typo. Code/Review/itkQuadEdgeMeshFrontIterator ENH: coverage. Code/Review/itkQuadEdgeMeshFrontIterator ENH: coverage. Code/Review/itkQuadEdgeMeshScalarDataVTKPolyDataWriter Code/Review/itkQuadEdgeMeshScalarDataVTKPolyDataWriter Code/Review/itkQuadEdgeMeshSmoothing STYLE: According to kwstyle. Code/Review/itkQuadEdgeMeshSmoothing 1518 Code/Review/itkQuadEdgeMeshToQuadEdgeMeshFilter ENH: faster QE 2 QE copy. Code/Review/itkRealAndImaginaryToComplexImageFilter insight-users/2009-February/029212.html Code/Review/itkRegionalMaximaImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/Review/itkRegionalMinimaImageFilter STYLE: Fix encoding in itkMetaDataObject.h and drop the diacritics to have the all the source code encoded in ascii. Most of the diacritics were in my name and in the name of my lab. The other were in the name of Ivan Macia - I hope he won't mind. Code/Review/itkRobustAutomaticThresholdCalculator 370 Code/Review/itkRobustAutomaticThresholdCalculator COMP: Fix error C2666: 'pow' : 7 overloads have similar conversions on FreeVC++ Code/Review/itkRobustAutomaticThresholdImageFilter STYLE: Add the IJ link and the author. Code/Review/itkRobustAutomaticThresholdImageFilter 370 Code/Review/itkShapedFloodFilledFunctionConditionalConstIterator Code/Review/itkShapedFloodFilledFunctionConditionalConstIterator Code/Review/itkShapedFloodFilledImageFunctionConditionalConstIterator Code/Review/itkShapedFloodFilledImageFunctionConditionalConstIterator Code/Review/itkShapedFloodFilledImageFunctionConditionalIterator Code/Review/itkSharedMorphologyUtilities COMP: Addressing warning about unused variable 'input' in line 270. Code/Review/itkSliceBySliceImageFilter Code/Review/itkSliceBySliceImageFilter Code/Review/itkSubtractConstantFromImageFilter insight-users/2009-February/029212.html Code/Review/itkVTKPolyDataWriter BUG: Fix error when PointsContainer is not contiguous and particular cases where SqueezePointsIds can not be applied Code/Review/itkVTKPolyDataWriter BUG: Fix error when PointsContainer is not contiguous and particular cases where SqueezePointsIds can not be applied Code/Review/itkVanHerkGilWermanDilateImageFilter insight-users/2009-February/029212.html Code/Review/itkVanHerkGilWermanErodeImageFilter insight-users/2009-February/029212.html Code/SpatialObject/itkAffineGeometryFrame STYLE: according to kwstyle. Code/SpatialObject/itkArrowSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkBlobSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkBoxSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkContourSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkContourSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkContourSpatialObjectPoint STYLE: according to kwstyle. Code/SpatialObject/itkCylinderSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkDTITubeSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkDTITubeSpatialObjectPoint STYLE: according to kwstyle. Code/SpatialObject/itkDTITubeSpatialObjectPoint STYLE: according to kwstyle. Code/SpatialObject/itkEllipseSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkGaussianSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkGroupSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkImageMaskSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkLandmarkSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkLineSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkLineSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkLineSpatialObjectPoint STYLE: according to kwstyle. Code/SpatialObject/itkMetaEvent STYLE: Fix various doxygen problems. Missing documentation is tagged with a TODO. Code/SpatialObject/itkMetaImageConverter STYLE: according to kwstyle. Code/SpatialObject/itkMetaSceneConverter STYLE: according to kwstyle. Code/SpatialObject/itkPlaneSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkPointBasedSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkPolygonGroupSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkPolygonSpatialObject STYLE: Fix various doxygen problems. Missing documentation is tagged with a TODO. Code/SpatialObject/itkSceneSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkSpatialObjectPoint STYLE: according to kwstyle. Code/SpatialObject/itkSpatialObjectTreeNode STYLE: according to kwstyle. Code/SpatialObject/itkSurfaceSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkSurfaceSpatialObjectPoint STYLE: according to kwstyle. Code/SpatialObject/itkTubeSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkTubeSpatialObjectPoint STYLE: according to kwstyle. Code/SpatialObject/itkVesselTubeSpatialObject STYLE: according to kwstyle. Code/SpatialObject/itkVesselTubeSpatialObjectPoint STYLE: according to kwstyle. Examples/Filtering/CMakeLists.txt ENH: Fine tunning parameter values for the GradientVectorFlowImageFilter. ENH: Adding example and testing for GradientVectorFlowImageFilter. Examples/Filtering/CannyEdgeDetectionImageFilter BUG: Failed to check for the existance of new command line arguments. Examples/Filtering/FilteringExamples8 ENH: Adding example and testing for GradientVectorFlowImageFilter. Examples/Filtering/GradientRecursiveGaussianImageFilter ENH: Improving the defintion of types by adding a explicit Dimension constant. Examples/Filtering/GradientVectorFlowImageFilter ENH: Fine tunning parameter values for the GradientVectorFlowImageFilter. ENH: Adding example and testing for GradientVectorFlowImageFilter. Examples/Filtering/ResampleImageFilter Examples/Filtering/ResampleImageFilter2 Examples/Filtering/ResampleImageFilter3 Examples/Filtering/ResampleImageFilter4 Examples/Filtering/ResampleImageFilter5 Examples/Filtering/ResampleImageFilter6 Examples/Filtering/ResampleImageFilter7 Examples/Filtering/ResampleImageFilter8 Examples/Filtering/ResampleImageFilter9 Examples/Filtering/ResampleVolumesToBeIsotrop Examples/Filtering/SubsampleVolume Examples/Filtering/WarpImageFilter1 Examples/Installation/CMakeLists.txt ENH: Updated for CMake 2.6. Examples/Registration/CMakeLists.txt ENH: Adding 3D version of example MultiResImageRegistration1.cxx. Examples/Registration/MultiResImageRegistration3 ENH: Adding 3D version of example MultiResImageRegistration1.cxx. Examples/Segmentation/CMakeLists.txt ENH: Improving examples for cellular-based segmentation. Now saving the output mesh, and also added a 3D example. Examples/Segmentation/CellularSegmentation1 COMP: Missed to add #ifdef ITK_USE_REVIEW around the #include of the VTKPolyDataWriter. Examples/Segmentation/CellularSegmentation2 COMP: Missed to add #ifdef ITK_USE_REVIEW around the #include of the VTKPolyDataWriter. Examples/Segmentation/SegmentationExamples9 ENH: Improving examples for cellular-based segmentation. Now saving the output mesh, and also added a 3D example. Examples/SpatialObjects/CMakeLists.txt COMP: remove redundant libray ITKMetaIO. Testing/Code/CMakeLists.txt COMP: Fixes issue with cmake release in new ubuntu - handles ++ in pathname Testing/Code/Algorithms/CMakeLists.txt ENH: Add a pixel tolerance to new regression test itkMultiResolutionPDEDeformableRegistrationTest. Testing/Code/Algorithms/itkAlgorithmsHeaderTest COMP: Fixing ifdef syntax. Missing "(". Testing/Code/Algorithms/itkAlgorithmsTests4 Testing/Code/Algorithms/itkBayesianClassifierImageFilterTest ENH: added pipeline monitor filter to output to verify Testing/Code/Algorithms/itkMultiResolutionPDEDeformableRegistrationTest ENH: itkMultiResolutionPDEDeformableRegistrationTest is now a regression test. Testing/Code/Algorithms/itkMultiResolutionPyramidImageFilterTest BUG: 0008275 Resolved issue to preserve center of mass of the images at all levels of the image pyramid. Testing/Code/Algorithms/itkRecursiveMultiResolutionPyramidImageFilterTest Testing/Code/Algorithms/itkRegularSphereMeshSourceTest ENH: Adding verification of points distance to center and adding verification of number of points per cell. Testing/Code/BasicFilters/CMakeLists.txt ENH: Added test to test the ReleaseDataFlag in a variety of complicated pipleline ways ENH: Exercise ConnectedComponentImageFilter with a RGB image as input. This use case was reported by Julien Michel, and broken by me in the absence of test. BUG: #7798. Modified itkDeformableSimplexMesh3DFilter types to be consistent with itkkSimplexMeshGeometry. This permits use of float coordtypes for Simplex Meshes. ENH: Added test to check for Simplex Mesh float points. Testing/Code/BasicFilters/itkBasicFiltersTests ENH: Exercise ConnectedComponentImageFilter with a RGB image as input. This use case was reported by Julien Michel, and broken by me in the absence of test. Testing/Code/BasicFilters/itkBasicFiltersTests2 BUG: BUGID 0008275 has detailed description of how to make this test pass. Testing/Code/BasicFilters/itkBasicFiltersTests5 ENH: Added test to test the ReleaseDataFlag in a variety of complicated pipleline ways Testing/Code/BasicFilters/itkCannyEdgeDetectionImageFilterTest BUG: 7219 added check of certain set methods Testing/Code/BasicFilters/itkConnectedComponentImageFilterTestRGB ENH: Exercise ConnectedComponentImageFilter with a RGB image as input. This use case was reported by Julien Michel, and broken by me in the absence of test. Testing/Code/BasicFilters/itkConnectedThresholdImageFilterTest Testing/Code/BasicFilters/itkDisplacementFieldJacobianDeterminantFilterTest ENH: better code coverage. Testing/Code/BasicFilters/itkGaussianImageSourceTest Testing/Code/BasicFilters/itkGradientMagnitudeRecursiveGaussianFilterTest COMP: Getting the modifications to compile with gcc 4.2. Testing/Code/BasicFilters/itkMaskImageFilterTest ENH: Improving coding style and adding call to Print() in order to increase code coverage. Testing/Code/BasicFilters/itkMaskNegatedImageFilterTest Testing/Code/BasicFilters/itkReleaseDataFilterTest BUG: DataObject:: GlobalReleaseDataFlag static member functions were not used, they are now Testing/Code/BasicFilters/itkShrinkImagePreserveObjectPhysicalLocations COMP: Test must support both states of ITK_IMAGE_BEHAVES_AS_ORIENTED_IMAGE. ENH: Added necessary include file. BUG: BUGID 0008275 has detailed description of how to make this test pass. Testing/Code/BasicFilters/itkShrinkImageTest Testing/Code/BasicFilters/itkSimplexMeshWithFloatCoordRepTest COMP: warnings. Testing/Code/BasicFilters/itkStreamingImageFilterTest BUG: 8457 overloaded PropagateRequestedRegion method to remove extraneous execution of propagating requested region up the pipeline then added a PipelineMonitor to the tests to verify the methods are not being called extra time Testing/Code/BasicFilters/itkStreamingImageFilterTest2 BUG: 8457 overloaded PropagateRequestedRegion method to remove extraneous execution of propagating requested region up the pipeline then added a PipelineMonitor to the tests to verify the methods are not being called extra time Testing/Code/Common/CMakeLists.txt ENH: Adding a test for evaluating the computation time of the vnl_math_rnd() function. Testing/Code/Common/itkBinaryThresholdSpatialFunctionTest ENH: Better coverage. Testing/Code/Common/itkCommonTests2 ENH: Adding a test for evaluating the computation time of the vnl_math_rnd() function. Testing/Code/Common/itkMultiThreaderTest COMP: shadowed variable warning. Testing/Code/Common/itkRigid3DTransformTest BUG: 0008320 When composing with a Translate operation the internal state of m_Translation variable was not being maintained properly because it is bypassed and the m_Offset was being set explicitly. this is problematic because m_Offest is only used internal to the transform, and m_Translation is the externally exposed interface for the class (i.e. GetParameters returns m_Translation). Testing/Code/Common/itkSplineKernelTransformTest BUG: ThinPlateR2LogRSplineKernelTransform was defined, but not tested. Testing/Code/Common/itkTimeStampTest private/insight-developers/2009-February/011732.html for more detail ENH: fake the non-optimized timestamp by surrounding the call to TimeStamp::Modified with a mutex ENH: Reorganizing the test and adding information print outs to track test failures. ENH: made TimeStampTest a little more stringent Testing/Code/Common/itkVNLRoundProfileTest1 ENH: Added Macro version of round (still based on an if). ENH: Increasing the number of repeats in the global for-loop. ENH: Adding more data points, and doubling the range from -5:5 to -10:10. ENH: Now performing verification of value correctness against the vanilla implementation of rounding. Testing/Code/Common/itkVectorInterpolateImageFunctionTest BUG: 1) itkVectorLinearInterpolateNearestNeighborExtrapolateImageFunctionTest and itkExponentialDeformationFieldImageFilterTest were not run automatically 2) itkVectorInterpolateImageFunctionTest and itkVectorLinearInterpolateNearestNeighborExtrapolateImageFunctionTest were not reporting failure for all errors Testing/Code/Common/itkVersorTest BUG: out of bounds array write caused bogus failures on some platforms. Testing/Code/IO/CMakeLists.txt ENH: added tests for exceptions on ImageFileReader and tests to miss matched dimensions on reading ENH:: added series streaming test for dicom in ITK_DATA_ROOT and added verification of image spacing BUG: 8436 added test to verify that the geometry remains the same after writing and reading for an image with a non-zero index ENH: Changed itkImageFileWriterStreamingPastingCompressingTest1 to test all io flags and added test for nrrd nhdr vtk and dcm file extensions BUG: corrected output of test. ENH: streaming for ImageFileWriter with collaboration from ImageIOBase ENH: Adding test for pasting mode in ImageIO. (Generic). Testing/Code/IO/ImageCompare ENH: Improved error reporting when an exception is part of the testing framework itself. Testing/Code/IO/ImageCompareCommand ENH: Improved error reporting when an exception is part of the testing framework itself. Testing/Code/IO/ImageCopy ENH: Improved error reporting when an exception is part of the testing framework itself. Testing/Code/IO/itkDicomImageIODirection2DTest Testing/Code/IO/itkGDCMSeriesStreamReadImageWrite ENH:: added series streaming test for dicom in ITK_DATA_ROOT and added verification of image spacing Testing/Code/IO/itkIOTests ENH: added tests for exceptions on ImageFileReader and tests to miss matched dimensions on reading BUG: 8436 added test to verify that the geometry remains the same after writing and reading for an image with a non-zero index ENH: streaming for ImageFileWriter with collaboration from ImageIOBase ENH: Adding test for pasting mode in ImageIO. (Generic). Testing/Code/IO/itkImageFileReaderStreamingTest STYLE: Fixing coding style: missing brackets in single line ifs, inserting spaces inside parenthesis. Testing/Code/IO/itkImageFileReaderTest1 ENH: Test to check exceptions of the ImageFileReader Testing/Code/IO/itkImageFileReaderTest2 ENH: Tests reading of files when the diminsions differ. We should be able to reader a 3D image into a 4D. and a 4D image whose last dimension has size 1 into a 3D image. Testing/Code/IO/itkImageFileWriterPastingTest1 BUG: 8436 changed RegionIOCovert to include index paramerter ENH: Adding test for pasting mode in ImageIO. (Generic). Testing/Code/IO/itkImageFileWriterPastingTest2 COMP: That quirky Borland compiler strikes again. STYLE: mainly indentation. ENH: Added method to internally test it paste region matches Testing/Code/IO/itkImageFileWriterStreamingPastingCompressingTest1 ENH: improved output to more easily trace what is occourring. Changed std::cerr to std::cout. COMP: fixed warning about scope of i in for loops Testing/Code/IO/itkImageFileWriterStreamingTest1 ENH: changed to PipelineMonitor::Verify methods SYTLE: was improved ENH: streaming for ImageFileWriter with collaboration from ImageIOBase Testing/Code/IO/itkImageFileWriterStreamingTest2 BUG: 8490 Enabled verification that the pipeline was executed correctly COMP: fixed unused err warning and confused double and unsighed int types in SameImage method ENH: Updated to print the part of the test it is runng and utilized test methods of PipelineMonitor Testing/Code/IO/itkImageFileWriterTest2 ENH:: added printing of ImageFileWriter Testing/Code/IO/itkMetaImageStreamingWriterIOTest BUG: Test was failing if # of slices was < number of splits. Now # of slipts is clamped. Testing/Code/IO/itkPipelineMonitorImageFilter ENH: added m_NumberOfClearPipeline variable and VerifyAllNoUpdate method ENH: Separated m_UpdatedRegions into m_UpdatedBufferedRegion and m_UpdatedRequestedRegion Testing/Code/Numerics/FEM/CMakeLists.txt ENH: Complementing the Itkpack tests, to run all solving methods with both the Test1 and Test2 Testing/Code/Numerics/FEM/itkFEMLinearSystemWrapperItpackTest Testing/Code/Numerics/FEM/itkFEMLinearSystemWrapperItpackTest2 BUG: It was destroying the wrong vector index. Testing/Code/Numerics/FEM/itkFEMTests Testing/Code/Numerics/Statistics/itkKdTreeGeneratorTest STYLE: Fix typos in comments. Testing/Code/Review/CMakeLists.txt BUG: 1) itkVectorLinearInterpolateNearestNeighborExtrapolateImageFunctionTest and itkExponentialDeformationFieldImageFilterTest were not run automatically 2) itkVectorInterpolateImageFunctionTest and itkVectorLinearInterpolateNearestNeighborExtrapolateImageFunctionTest were not reporting failure for all errors ENH: Split itkQuadEdgeMeshAddFaceTest1 into several tests 370 1323 321 BUG: Add one test for decimation with Tetrahedron. It is now failing (see BUG ID 0008499) BUG:some tests were not running ENH: Adding test that produces a Regular Sphere and writes it down as a VTK polydata file. ENH: Adding unit test for itkQuadEdgeMeshScalarDataVTKPolyDataWriter. Testing/Code/Review/itkAddConstantToImageFilterTest STYLE: indentation. Testing/Code/Review/itkAreaClosingImageFilterTest Testing/Code/Review/itkAreaOpeningImageFilterTest Testing/Code/Review/itkBinaryContourImageFilterTest ENH: Enhance code coverage of [Label,Binary]ContourImageFilter. publication/217 Testing/Code/Review/itkConformalFlatteningMeshFilterTest ENH: Adding command line argument for the cellID to be used as the Pole. Testing/Code/Review/itkConvolutionImageFilterTest COMP: Hopefully, fix warning C4101: 'excp' : unreferenced local variable on FreeVC++ ENH: Add sobel (not normalized) tests. Testing/Code/Review/itkConvolutionImageFilterTestInt BUG: Fix the not good enough precision used for the inner product when pixel type is a small int, the optional normalize parameter in the test, and the baseline image. 1323 Testing/Code/Review/itkDiffeomorphicDemonsRegistrationFilterTest BUG: Test for non-identity orientation only if both ITK_USE_ORIENTED_IMAGE_DIRECTION and ITK_IMAGE_BEHAVES_AS_ORIENTED_IMAGE are ON. Testing/Code/Review/itkExponentialDeformationFieldImageFilterTest ENH: Added the possibility to compute the inverse deformation field with ExponentialDeformationFieldImageFilter Testing/Code/Review/itkFFTShiftImageFilterTest ENH: Enhance code coverage of fft shift filter. Testing/Code/Review/itkGeometricalQuadEdgeTest1 ENH: coverage. Testing/Code/Review/itkHessianToObjectnessMeasureImageFilterTest ENH: Enabling compression when writing output images. Testing/Code/Review/itkLabelContourImageFilterTest ENH: Enhance code coverage of [Label,Binary]ContourImageFilter. publication/217 Testing/Code/Review/itkMapOptGrayscaleMorphologicalClosingImageFilterTest BUG: Wrong default value in the tests. Testing/Code/Review/itkMapOptGrayscaleMorphologicalOpeningImageFilterTest BUG: Wrong default value in the tests. Testing/Code/Review/itkMultiScaleHessianBasedMeasureImageFilterTest ENH: Enabling compression when writing output images. Testing/Code/Review/itkOptGrayscaleMorphologicalClosingImageFilterTest BUG: Wrong default value in the tests. Testing/Code/Review/itkOptGrayscaleMorphologicalOpeningImageFilterTest BUG: Wrong default value in the tests. Testing/Code/Review/itkPriorityQueueTest ENH: coverage. Testing/Code/Review/itkQuadEdgeMeshAddFaceTest1 ENH: Split itkQuadEdgeMeshAddFaceTest1 into several tests ENH: coverage. Testing/Code/Review/itkQuadEdgeMeshCountingCellsTest ENH: Increase coverage by testing particular cases for JoinVertexTests Testing/Code/Review/itkQuadEdgeMeshEulerOperatorCreateCenterVertexTest ENH: optimization of release code in all QuadEdgeMesh related classes. Testing/Code/Review/itkQuadEdgeMeshEulerOperatorDeleteCenterVertexTest ENH: Increase coverage by testing particular cases for JoinVertexTests Testing/Code/Review/itkQuadEdgeMeshEulerOperatorFlipTest ENH: coverage. ENH: Increase coverage by testing particular cases for JoinVertexTests Testing/Code/Review/itkQuadEdgeMeshEulerOperatorJoinFacetTest BUG: unused variable quadEdge1c and dummy in Release mode. ENH: Increase coverage by testing particular cases for JoinVertexTests Testing/Code/Review/itkQuadEdgeMeshEulerOperatorJoinVertexTest BUG: Fix bug with tetrahedron case. STYLE: Fix typo. BUG: iter variable was not used. Testing/Code/Review/itkQuadEdgeMeshEulerOperatorSplitEdgeTest ENH: Increase coverage by testing particular cases for JoinVertexTests Testing/Code/Review/itkQuadEdgeMeshEulerOperatorSplitFaceTest ENH: Increase coverage by testing particular cases for JoinVertexTests Testing/Code/Review/itkQuadEdgeMeshEulerOperatorSplitVertexTest ENH: Increase coverage by testing particular cases for JoinVertexTests Testing/Code/Review/Attic/itkQuadEdgeMeshEulerOperatorsTest ENH: Removing obsolete test. Testing/Code/Review/itkQuadEdgeMeshEulerOperatorsTestHelper ENH: Increase coverage by testing particular cases for JoinVertexTests Testing/Code/Review/itkQuadEdgeMeshLinearParameterizationTest ENH: coverage. Testing/Code/Review/itkQuadEdgeMeshScalarDataVTKPolyDataWriterTest1 ENH: Improving usage of variables. ENH: Adding unit test for itkQuadEdgeMeshScalarDataVTKPolyDataWriter. Testing/Code/Review/itkQuadEdgeMeshSmoothingTest COMP: signature for main must be int argc, char* argv[], not int argc, char** argv. Testing/Code/Review/itkQuadEdgeMeshTest1 ENH: coverage. Testing/Code/Review/itkQuadEdgeTest1 BUG: unused variable quadEdge1c and dummy in Release mode. Testing/Code/Review/itkRegularSphereQuadEdgeMeshSourceTest ENH: Verifying the correctness of the output produced by the RegularSphere filter. Testing/Code/Review/itkReviewHeaderTest BUG: incorrect header file included 1323 publication/217 Testing/Code/Review/itkReviewPrintTest COMP: Fixing declarations for the itkMultiScaleHessianBasedMeasureImageFilter. ENH: Enhance code coverage of ImageKernelOperator. Testing/Code/Review/itkReviewTests BUG: 1) itkVectorLinearInterpolateNearestNeighborExtrapolateImageFunctionTest and itkExponentialDeformationFieldImageFilterTest were not run automatically 2) itkVectorInterpolateImageFunctionTest and itkVectorLinearInterpolateNearestNeighborExtrapolateImageFunctionTest were not reporting failure for all errors 370 321 ENH: Adding a test that combines the RegularSphere generator and the VTK polydata writer. Testing/Code/Review/itkReviewTests2 1518 Testing/Code/Review/itkRobustAutomaticThresholdImageFilterTest 370 Testing/Code/Review/itkShapedFloodFilledImageFunctionConditionalConstIteratorTest1 COMP: Addressing VS60 warning about compiler generated default constructor and assignment to const. COMP: Fix warnings. Testing/Code/Review/itkShapedFloodFilledImageFunctionConditionalConstIteratorTest2 COMP: Removing unused variable argv. COMP: Fix warnings. Testing/Code/Review/itkShapedFloodFilledImageFunctionConditionalConstIteratorTest3 COMP: Fix warnings. Testing/Code/Review/itkSliceBySliceImageFilterTest STYLE: indentation. Testing/Code/Review/itkVTKPolyDataWriterTest2 ENH: Adding test that produces a Regular Sphere and writes it down as a VTK polydata file. Testing/Code/Review/itkVectorLinearInterpolateNearestNeighborExtrapolateImageFunctionTest COMP: Adding itkNotUsed() to resolve warning about function argument not being used. Testing/Data/Baseline/Algorithms/itkBayesianClassifierImageFilterTestLabelMap.png Testing/Data/Baseline/Algorithms/itkMultiResolutionPDEDeformableRegistrationTest.1.png ENH: new baseline for improve pyramid filter. Testing/Data/Baseline/Algorithms/itkMultiResolutionPDEDeformableRegistrationTest.png ENH: itkMultiResolutionPDEDeformableRegistrationTest is now a regression test. Testing/Data/Baseline/BasicFilters/ConnectedThresholdImageFilterTest2.png Testing/Data/Baseline/BasicFilters/GrayscaleMorphologicalClosingImageFilterTest.png Testing/Data/Baseline/BasicFilters/GrayscaleMorphologicalOpeningImageFilterTest.png Testing/Data/Baseline/BasicFilters/itkBlackTopHatImageFilterTest.png Testing/Data/Baseline/BasicFilters/itkWhiteTopHatImageFilterTest.png Testing/Data/Baseline/Filtering/CannyEdgeDetectionImageFilter.png Testing/Data/Baseline/Filtering/CannyEdgeDetectionImageFilter2.png ENH: Base line for new test that illustrates the effect of Upper and Lower Thresholds in the CannyEdgeDetectionImageFilter. Testing/Data/Baseline/Filtering/MorphologicalImageEnhancement.png Testing/Data/Baseline/Filtering/ResampleImageFilter9Test.2.png COMP: Baseline for cygwin. Testing/Data/Baseline/Filtering/ZeroCrossingBasedEdgeDetectionImageFilter1.png Testing/Data/Baseline/Review/itkAreaClosingImageFilterTest0.png 1316 Testing/Data/Baseline/Review/itkAreaOpeningImageFilterTest0.png 1316 Testing/Data/Baseline/Review/itkBinaryContourImageFilterTest0.png publication/217 Testing/Data/Baseline/Review/itkBinaryContourImageFilterTest1.png publication/217 Testing/Data/Baseline/Review/itkConvolutionImageFilterTest5x5Mean.png BUG: Fix the not good enough precision used for the inner product when pixel type is a small int, the optional normalize parameter in the test, and the baseline image. Testing/Data/Baseline/Review/itkConvolutionImageFilterTestSobelX.nii.gz ENH: Add sobel (not normalized) tests. Testing/Data/Baseline/Review/itkConvolutionImageFilterTestSobelY.nii.gz ENH: Add sobel (not normalized) tests. Testing/Data/Baseline/Review/itkFFTShiftImageFilterTest0.png 321 Testing/Data/Baseline/Review/itkFFTShiftImageFilterTestEven0.png ENH: Enhance code coverage of fft shift filter. Testing/Data/Baseline/Review/itkLabelContourImageFilterTest0.png publication/217 Testing/Data/Baseline/Review/itkLabelContourImageFilterTest1.png publication/217 Testing/Data/Baseline/Review/itkRobustAutomaticThresholdImageFilterTest.png 370 Testing/Data/Input/5x5-constant.png 1323 Testing/Data/Input/8ConnectedImage.bmp Testing/Data/Input/DSA.png Testing/Data/Input/HeadMRVolume.mha BUG: error in previous commit, this should not work with non-windows too ENH: streaming for ImageFileWriter with collaboration from ImageIOBase Testing/Data/Input/sobel_x.nii.gz ENH: Add sobel (not normalized) tests. Testing/Data/Input/sobel_y.nii.gz ENH: Add sobel (not normalized) tests. Testing/Data/Input/tetrahedron.vtk ENH: Add thetrahedron vtk file Utilities/CMakeLists.txt ENH: Add KWStyle. BUG: Fix issue reported by Simon Warfield and incorrect codec decompression for 16bits SIEMENS lossless jpeg. (backport) Utilities/KWStyle/CMakeLists.txt ENH: testing ENH: testing ENH: testing Utilities/KWStyle/ITK.cvs.kws.xml ENH: Added checkstyle Utilities/KWStyle/ITKFiles.txt.in ENH: Fixed issue with glob() STYLE: patented is now clean. STYLE: adding more. ENH: Algorithms is complete. STYLE: Numerics. ENH: more files from algorithms. Utilities/KWStyle/ITKOverwrite.txt COMP: more common overrides. STYLE: VS6 cannot tolerate namespace in this file. STYLE: Common exceptions. STYLE: FEM exceptions. STYLE: FEM exceptions. STYLE: FEM exceptions. STYLE: FEM exceptions. STYLE: FEM exceptions. ENH: Algorithms is complete. Utilities/KWStyle/ITKReviewFiles.txt.in ENH: Add back cxx testing. ENH: debuggng commit. Utilities/KWStyle/KWStyle.cmake BUG: Fixing issue with STREQUAL ENH: Checking KWStyle version Utilities/KWStyle/doAllStyle.csh.in ENH: more emacs friendly. ENH: a unis script to run KWStyle on an entire directory. Utilities/MetaIO/.svnrev ENH: subversion revision 782 commited to CVS ENH: subversion revision 778 commited to CVS ENH: subversion revision 776 commited to CVS ENH: subversion revision 762 commited to CVS ENH: subversion revision 732 commited to CVS ENH: subversion revision 723 commited to CVS ENH: subversion revision 721 commited to CVS ENH: subversion revision 699 commited to CVS ENH: subversion revision 642 commited to CVS ENH: subversion revision 640 commited to CVS Utilities/MetaIO/metaCommand Utilities/MetaIO/metaImage Utilities/MetaIO/metaImage Utilities/MetaIO/metaUtils Utilities/MetaIO/metaUtils Utilities/gdcm/CMakeLists.txt Utilities/gdcm/src/gdcmElementSet BUG: Fix 0007004: ITK Memory leak in gdcm::gdcmdocument.h , function ParseDES, invoke RemoveEntry, and the solved method. Thanks to summit for report+patch Utilities/gdcm/src/gdcmFile STYLE: use itksys ns. Utilities/gdcm/src/gdcmFileHelper BUG: Need a valid root uid. At same time store gdcm version to be able to track potential confusion BUG: Fix issue reported by Simon Warfield and incorrect codec decompression for 16bits SIEMENS lossless jpeg. (backport) Utilities/gdcm/src/gdcmFileHelper BUG: Fix issue reported by Simon Warfield and incorrect codec decompression for 16bits SIEMENS lossless jpeg. (backport) Utilities/gdcm/src/gdcmJPEGFragment BUG: Handle case of JPEG 16Bits is stored in 12Bits DICOM *only after* case where JPEG 12Bits is stored in 12Bits DICOM as mandated by DICOM standard Utilities/gdcm/src/gdcmJPEGFragment BUG: Handle case of JPEG 16Bits is stored in 12Bits DICOM *only after* case where JPEG 12Bits is stored in 12Bits DICOM as mandated by DICOM standard Utilities/gdcm/src/gdcmJPEGFragmentsInfo BUG: Handle case of JPEG 16Bits is stored in 12Bits DICOM *only after* case where JPEG 12Bits is stored in 12Bits DICOM as mandated by DICOM standard Utilities/gdcm/src/gdcmJPEGFragmentsInfo BUG: Handle case of JPEG 16Bits is stored in 12Bits DICOM *only after* case where JPEG 12Bits is stored in 12Bits DICOM as mandated by DICOM standard Utilities/gdcm/src/gdcmJpeg BUG: Handle case of JPEG 16Bits is stored in 12Bits DICOM *only after* case where JPEG 12Bits is stored in 12Bits DICOM as mandated by DICOM standard Utilities/gdcm/src/gdcmPixelReadConvert BUG: Handle case of JPEG 16Bits is stored in 12Bits DICOM *only after* case where JPEG 12Bits is stored in 12Bits DICOM as mandated by DICOM standard Utilities/kwsys/CMakeLists.txt Utilities/kwsys/CTestConfig.cmake ENH: make it submit to cdash Utilities/kwsys/DynamicLoader ENH: fix dynamic loading on haiku Utilities/kwsys/DynamicLoader.hxx.in ENH: fix dynamic loading on haiku Utilities/kwsys/ProcessUNIX COMP:Fixed warnings. Utilities/kwsys/System Utilities/kwsys/SystemInformation BUG: #8496 add support for system info on haiku BUG: fix cpu info string Utilities/kwsys/SystemTools BUG: Do not copy permissions of files when making the copy in an install rule. If the source file was read-only, this prevents the subsequent set of the destination file's modification time, making the copied file always different in time-stamp than the original and always installing a new file with a new time stamp (but the same content) causing unnecessary downstream incremental rebuilds. As part of this fix, add an optional copyPermissions parameter to the SystemTools routines CopyFileIfDifferent, CopyFileAlways, CopyAFile and CopyADirectory. The copyPermissions parameter defaults to true to preserve the behavior of these routines for existing callers. Utilities/kwsys/SystemTools.hxx.in BUG: Do not copy permissions of files when making the copy in an install rule. If the source file was read-only, this prevents the subsequent set of the destination file's modification time, making the copied file always different in time-stamp than the original and always installing a new file with a new time stamp (but the same content) causing unnecessary downstream incremental rebuilds. As part of this fix, add an optional copyPermissions parameter to the SystemTools routines CopyFileIfDifferent, CopyFileAlways, CopyAFile and CopyADirectory. The copyPermissions parameter defaults to true to preserve the behavior of these routines for existing callers. Utilities/kwsys/kwsysDateStamp.cmake STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp STYLE: Nightly Date Stamp Utilities/kwsys/testProcess Utilities/vxl/config/cmake/config/CMakeLists.txt Utilities/vxl/config/cmake/config/vxl_utils.cmake COMP: Reverting change related to POLICY CMP0011 because it produces errors in CMake 2.4.6. Wrapping/CMakeLists.txt COMP: Generate an error if the new and the old wrapping are used together. Wrapping/WrapITK/CMakeLists.txt COMP: fix missing linkage with libstdc++ on solaris Wrapping/WrapITK/Java/CWD/CMakeLists.txt COMP: fix missing linkage with libstdc++ on solaris Wrapping/WrapITK/Modules/Base/CMakeLists.txt ENH: Add ContourExtractor2DImageFilter and other required classes wrappers to wrapitk. Wrapping/WrapITK/Modules/Base/wrap_itkFunctionBase.cmake COMP: Fix wrapping gap warnings. Wrapping/WrapITK/Modules/Base/wrap_itkImageFunction.cmake COMP: Fix wrapping gap warnings. Wrapping/WrapITK/Modules/Base/wrap_itkImageToImageFilterB.cmake ENH: Add BayesianClassifierImageFilter and BayesianClassifierInitializationImageFilter wrappers in wrapitk. Wrapping/WrapITK/Modules/Base/wrap_itkParametricPath.cmake ENH: Add ContourExtractor2DImageFilter and other required classes wrappers to wrapitk. Wrapping/WrapITK/Modules/Base/wrap_itkPath.cmake ENH: Add ContourExtractor2DImageFilter and other required classes wrappers to wrapitk. Wrapping/WrapITK/Modules/Base/wrap_itkPathSource.cmake ENH: Add ContourExtractor2DImageFilter and other required classes wrappers to wrapitk. Wrapping/WrapITK/Modules/Base/wrap_itkPolyLineParametricPath.cmake ENH: Add ContourExtractor2DImageFilter and other required classes wrappers to wrapitk. Wrapping/WrapITK/Modules/Filtering/wrap_itkGradientVectorFlowImageFilter.cmake COMP: Fix wrapping gap warnings by using the 3rd template arguments. The wrong version was commited in the previous commit. Wrapping/WrapITK/Modules/LevelSet/CMakeLists.txt ENH: Add FastMarchingExtensionImageFilter wrapper to wrapitk. Wrapping/WrapITK/Modules/LevelSet/wrap_itkFastMarchingExtensionImageFilter.cmake ENH: Add FastMarchingExtensionImageFilter wrapper to wrapitk. Wrapping/WrapITK/Modules/Registration/CMakeLists.txt ENH: Add DeformationFieldJacobianDeterminantFilter wrapper to wrapitk. COMP: Fix wrapping gap warnings. Wrapping/WrapITK/Modules/Registration/wrap_itkDeformationFieldJacobianDeterminantFilter.cmake ENH: Add DeformationFieldJacobianDeterminantFilter wrapper to wrapitk. Wrapping/WrapITK/Modules/Registration/wrap_itkDifferenceOfGaussiansGradientImageFilter.cmake ENH: Add DifferenceOfGaussiansGradientImageFilter wrapper to wrapitk. Wrapping/WrapITK/Modules/Registration/wrap_itkESMDemonsRegistrationFunction.cmake COMP: Add ESMDemonsRegistrationFunction to try to fix too long file names generated with java. Wrapping/WrapITK/Modules/Registration/wrap_itkEigenAnalysis2DImageFilter.cmake ENH: Add EigenAnalysis2DImageFilter wrapper to wrapitk. Wrapping/WrapITK/Modules/Registration/wrap_itkPDEDeformableRegistrationFunction.cmake COMP: Fix wrapping gap warnings. Wrapping/WrapITK/Modules/Review/CMakeLists.txt ENH: Add ContourExtractor2DImageFilter and other required classes wrappers to wrapitk. Wrapping/WrapITK/Modules/Review/wrap_itkAreaClosingImageFilter.cmake ENH: Add AreaClosingImageFilter and AreaOpeningImageFilter wrappers. Wrapping/WrapITK/Modules/Review/wrap_itkAreaOpeningImageFilter.cmake ENH: Add AreaClosingImageFilter and AreaOpeningImageFilter wrappers. Wrapping/WrapITK/Modules/Review/wrap_itkBinaryContourImageFilter.cmake publication/217 Wrapping/WrapITK/Modules/Review/wrap_itkContourExtractor2DImageFilter.cmake ENH: Add ContourExtractor2DImageFilter and other required classes wrappers to wrapitk. Wrapping/WrapITK/Modules/Review/wrap_itkConvolutionImageFilter.cmake ENH: Add ConvolutionImageFilter wrapper Wrapping/WrapITK/Modules/Review/wrap_itkFFTShiftImageFilter.cmake 321 Wrapping/WrapITK/Modules/Review/wrap_itkImageToPathFilter.cmake ENH: Add ContourExtractor2DImageFilter and other required classes wrappers to wrapitk. Wrapping/WrapITK/Modules/Review/wrap_itkLabelContourImageFilter.cmake publication/217 Wrapping/WrapITK/Modules/Review/wrap_itkRobustAutomaticThresholdImageFilter.cmake 370 Wrapping/WrapITK/Modules/SegmentationAndThreshold/wrap_itkBayesianClassifierImageFilter.cmake ENH: Add BayesianClassifierImageFilter and BayesianClassifierInitializationImageFilter wrappers in wrapitk. Wrapping/WrapITK/Modules/SegmentationAndThreshold/wrap_itkBayesianClassifierInitializationImageFilter.cmake ENH: Add BayesianClassifierImageFilter and BayesianClassifierInitializationImageFilter wrappers in wrapitk. Wrapping/WrapITK/SwigRuntime/CMakeLists.txt COMP: fix missing linkage with libstdc++ on solaris Wrapping/WrapITK/images/CannyEdgeDetectionImageFilter.png BUG: Update of the Canny edge baseline is required after the bug fixes in ITK.