TrackSpecification: Difference between revisions
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== Specification for track file format == | == Specification for track file format == | ||
<pre> | <pre> | ||
| | |Required| | ||
<ImagingSession> | | <ImagingSession> | n | **** SESSION INFORMATION **** | ||
<HeaderFile> | | <HeaderFile> | n | Name of the MegaCapture File containing all the session information | ||
CaltechZebrafishSubsetData.meg | - | | CaltechZebrafishSubsetData.meg | - | | ||
</HeaderFile> | - | | </HeaderFile> | - | | ||
</ImagingSession> | - | | </ImagingSession> | - | | ||
<ListOfTracks> | | <ListOfTracks> | Y | **** TRACK INFORMATION **** | ||
<NumberOfTracks> | | <NumberOfTracks> | Y | Number of tracks contained in the lineage | ||
327 | - | | 327 | - | | ||
</NumberOfTracks> | - | | </NumberOfTracks> | - | | ||
<Track> | | <Track> | Y | | ||
<TrackID> | | <TrackID> | n | Id of the lineage that the track belongs to | ||
2 | - | | 2 | - | | ||
</TrackID> | - | | </TrackID> | - | | ||
<LineageID> | | <LineageID> | n | | ||
0 | - | | 0 | - | | ||
</LineageID> | - | | </LineageID> | - | | ||
<MotherTrackID> | | <MotherTrackID> | n | | ||
2 | - | | 2 | - | | ||
</MotherTrackID> | - | | </MotherTrackID> | - | | ||
<ListOfMeshes> | | <ListOfMeshes> | Y | **** MESHES IN THIS TRACK **** | ||
<NumberOfMeshes> | | <NumberOfMeshes> | Y | Number of meshes contained in the track | ||
23 | - | | 23 | - | | ||
</NumberOfMeshes> | - | | </NumberOfMeshes> | - | | ||
<Mesh> | | <Mesh> | Y | **** MESH INFORMATIONS **** | ||
<MeshID> | | <MeshID> | n | | ||
3 | - | | 3 | - | | ||
</MeshID> | - | | </MeshID> | - | | ||
<TCoord> | | <TCoord> | Y | Time coordinate of the mesh | ||
0 | - | | 0 | - | | ||
</TCoord> | - | | </TCoord> | - | | ||
<Centroid> | | <Centroid> | Y | Spatial coordinate of the mesh's centroid | ||
<X>114.4960</X> | | <X>114.4960</X> | Y | X coordinate | ||
<Y>202.7230</Y> | | <Y>202.7230</Y> | Y | Y coordinate | ||
<Z>66.7290>/Z> | | <Z>66.7290>/Z> | Y | Z coordinate | ||
</Centroid> | - | | </Centroid> | - | | ||
<Volume> | | <Volume> | n | Volume of mesh | ||
537.92 | - | | 537.92 | - | | ||
</Volume> | - | | </Volume> | - | | ||
<Filename> | | <Filename> | n | Filename of the vtk file containing the geometry of the mesh | ||
0_1.vtk | - | | 0_1.vtk | - | | ||
</Filename> | - | | </Filename> | - | | ||
<Intensity> | | <Intensity> | n | intensity informations | ||
<Channel>0</Channel> | | <Channel>0</Channel> | n | - Channel | ||
<AverageValue>95.95</AverageValue> | | <AverageValue>95.95</AverageValue> | n | - Average corresponding intensity | ||
</Intensity> | - | | </Intensity> | - | | ||
</Mesh> | - | | </Mesh> | - | |
Revision as of 18:18, 25 July 2011
Specification for track file format
|Required| <ImagingSession> | n | **** SESSION INFORMATION **** <HeaderFile> | n | Name of the MegaCapture File containing all the session information CaltechZebrafishSubsetData.meg | - | </HeaderFile> | - | </ImagingSession> | - | <ListOfTracks> | Y | **** TRACK INFORMATION **** <NumberOfTracks> | Y | Number of tracks contained in the lineage 327 | - | </NumberOfTracks> | - | <Track> | Y | <TrackID> | n | Id of the lineage that the track belongs to 2 | - | </TrackID> | - | <LineageID> | n | 0 | - | </LineageID> | - | <MotherTrackID> | n | 2 | - | </MotherTrackID> | - | <ListOfMeshes> | Y | **** MESHES IN THIS TRACK **** <NumberOfMeshes> | Y | Number of meshes contained in the track 23 | - | </NumberOfMeshes> | - | <Mesh> | Y | **** MESH INFORMATIONS **** <MeshID> | n | 3 | - | </MeshID> | - | <TCoord> | Y | Time coordinate of the mesh 0 | - | </TCoord> | - | <Centroid> | Y | Spatial coordinate of the mesh's centroid <X>114.4960</X> | Y | X coordinate <Y>202.7230</Y> | Y | Y coordinate <Z>66.7290>/Z> | Y | Z coordinate </Centroid> | - | <Volume> | n | Volume of mesh 537.92 | - | </Volume> | - | <Filename> | n | Filename of the vtk file containing the geometry of the mesh 0_1.vtk | - | </Filename> | - | <Intensity> | n | intensity informations <Channel>0</Channel> | n | - Channel <AverageValue>95.95</AverageValue> | n | - Average corresponding intensity </Intensity> | - | </Mesh> | - | </ListOfMeshes> | - | <Track> | - | <ListOfTracks> | - |