From utkarsh.ayachit at kitware.com Thu Jan 1 10:50:56 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Thu, 1 Jan 2015 10:50:56 -0500
Subject: [Paraview] [EXTERNAL] Re: Calculating the distance between two
surfaces as a function of time during large deformation process
In-Reply-To: <CAB5Fpx6fjTjS4u6JFBOp5sey-jWLyK7O=ger9Fnx1vgxsWmQig@mail.gmail.com>
References: <7bff6ebdfcac49f9acad775d8c36fdf8@ES05AMSNLNT.srn.sandia.gov>
<D0BFB6AB.7457D%biddisco@cscs.ch>
<CAB5Fpx46z=YxM-uww5JOBQVj3jsLamOcU9NqBkXRBz=YfEimMw@mail.gmail.com>
<cb3bb8243e924fa29b5dbbceb17c3de1@ES05AMSNLNT.srn.sandia.gov>
<CAB5Fpx5ycazjqbN6rtGhPPTcNXQnCar4PoKEwGaqW42Lx02bMw@mail.gmail.com>
<3b9ee9a91f074ec18719b8c88b54a68b@ES05AMSNLNT.srn.sandia.gov>
<CAB5Fpx6fjTjS4u6JFBOp5sey-jWLyK7O=ger9Fnx1vgxsWmQig@mail.gmail.com>
Message-ID: <CADHSJjC3Db4ZcZcG4H8mduy2RZxN95A=2P8jn9zrOkUWEvdciw@mail.gmail.com>
Cory,
disk_out_ref.exo and disk_out_ref.ex2 are one and the same, I think. I am
not aware of a different disk_out_ref.exo
On Wed, Dec 31, 2014 at 10:10 PM, Cory Quammen <cory.quammen at kitware.com>
wrote:
> Hi Alan,
>
> Is the file disk_out_ref.exo different from the file disk_out_ref.ex2
> that comes with the ParaView test data?
>
> Thanks,
> Cory
>
> On Wed, Dec 24, 2014 at 8:15 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> > Cory,
> > Excellent idea. I did try, and yes - I end up with polydata. However,
> I then don't see any output. Mind giving this a try? Utkarsh should have
> disk_out_ref.exo. What I did;
> >
> > Read in disk_out_ref.exo.
> > merge blocks
> > extract surface.
> > read in disk_out_ref.exo (yes, I know I could have used the original.
> Being pre-Christmas brain dead.)
> > transform. X translation 20. (disks now have a distance from each
> other of about 8.5 units.)
> > merge blocks
> > extract surface.
> > highlight each extract surface.
> > programmable filter. Paste in your code.
> >
> > No output variable named "distance" to be found.
> >
> > Thanks,
> >
> > Alan
> >
> > -----Original Message-----
> > From: Cory Quammen [mailto:cory.quammen at kitware.com]
> > Sent: Wednesday, December 24, 2014 3:10 PM
> > To: Scott, W Alan
> > Cc: Biddiscombe, John A.; paraview at paraview.org
> > Subject: Re: [EXTERNAL] Re: [Paraview] Calculating the distance between
> two surfaces as a function of time during large deformation process
> >
> > Alan,
> >
> > disk_out_ref.ex2 -> Merge Blocks -> Extract Surface should get you
> polydata that you can feed into the programmable filter.
> >
> > Thanks,
> > Cory
> >
> > On Wed, Dec 24, 2014 at 12:44 PM, Scott, W Alan <wascott at sandia.gov>
> wrote:
> >> Very nice and simple! Thanks.
> >>
> >> I tried running it on two instances of disk_out_ref.exo, and it
> complained that it has MultiBlock data as inputs, but needs PolyData.
> Being a neophyte with the programmable filter, how can I either convert my
> data, or convert the filter to use multiblock data?
> >>
> >> Thanks!!
> >>
> >> Alan
> >>
> >> -----Original Message-----
> >> From: Cory Quammen [mailto:cory.quammen at kitware.com]
> >> Sent: Tuesday, December 23, 2014 8:32 PM
> >> To: Biddiscombe, John A.
> >> Cc: Scott, W Alan; paraview at paraview.org
> >> Subject: [EXTERNAL] Re: [Paraview] Calculating the distance between
> >> two surfaces as a function of time during large deformation process
> >>
> >> Hi Alan,
> >>
> >> There is a filter in VTK called vtkDistancePolyDataFilter. It takes two
> polydata as inputs and produces up two two outputs, each with an the
> (optionally) signed distance from each point in the first polydata to the
> closest point on the second polydata. If the polydata inputs overlap and
> the signed distance is requested, the distance may be negative, which means
> that the point at which the distance is computed is inside the other
> polydata.
> >>
> >> Attached is a ParaView 4.2 state file with a Programmable Filter that
> exposes the vtkDistancePolyDataFilter. It could also be exposed as an XML
> plugin.
> >>
> >> Cheers,
> >> Cory
> >>
> >> On Tue, Dec 23, 2014 at 6:20 PM, Biddiscombe, John A. <biddisco at cscs.ch>
> wrote:
> >>> The way I did this was to use one surface as a ?source? - fire rays
> >>> from this surface along the surface normal until they hit the ?target?
> >>> and return the distance. Then use the distances for every source node
> >>> as a new field which is output. One requires ideally a source mesh
> >>> with quite dense points to get a good sampling.
> >>>
> >>> JB
> >>>
> >>> On 23/12/14 21:02, "Scott, W Alan" <wascott at sandia.gov> wrote:
> >>>
> >>>>I have a user that asked the following question. Any ideas how to do
> >>>>this?
> >>>>
> >>>>Thanks,
> >>>>
> >>>>Alan
> >>>>
> >>>>
> >>>>Greetings,
> >>>>
> >>>>I need to quantify the distance between two curved and deforming
> >>>>surfaces (large deformation mechanical analysis) as a function of
> >>>>time in batch mode. I don't know (and don't want to know) which two
> >>>>node points are the closest. Could you outline how you would code up
> something like this ?
> >>>>
> >>>>George
> >>>>
> >>>>
> >>>>
> >>>>
> >>>>_______________________________________________
> >>>>Powered by www.kitware.com
> >>>>
> >>>>Visit other Kitware open-source projects at
> >>>>http://www.kitware.com/opensource/opensource.html
> >>>>
> >>>>Please keep messages on-topic and check the ParaView Wiki at:
> >>>>http://paraview.org/Wiki/ParaView
> >>>>
> >>>>Search the list archives at: http://markmail.org/search/?q=ParaView
> >>>>
> >>>>Follow this link to subscribe/unsubscribe:
> >>>>http://public.kitware.com/mailman/listinfo/paraview
> >>>
> >>> _______________________________________________
> >>> Powered by www.kitware.com
> >>>
> >>> Visit other Kitware open-source projects at
> >>> http://www.kitware.com/opensource/opensource.html
> >>>
> >>> Please keep messages on-topic and check the ParaView Wiki at:
> >>> http://paraview.org/Wiki/ParaView
> >>>
> >>> Search the list archives at: http://markmail.org/search/?q=ParaView
> >>>
> >>> Follow this link to subscribe/unsubscribe:
> >>> http://public.kitware.com/mailman/listinfo/paraview
> >>
> >>
> >>
> >> --
> >> Cory Quammen
> >> R&D Engineer
> >> Kitware, Inc.
> >
> >
> >
> > --
> > Cory Quammen
> > R&D Engineer
> > Kitware, Inc.
>
>
>
> --
> Cory Quammen
> R&D Engineer
> Kitware, Inc.
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From utkarsh.ayachit at kitware.com Fri Jan 2 10:43:07 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Fri, 2 Jan 2015 10:43:07 -0500
Subject: [Paraview] ANN: ParaView 4.3.0-RC1 now available for download
Message-ID: <CADHSJjDM1sJzJceDKjNyc7itMe6PyLPotnfaToxq2A_vGBntMA@mail.gmail.com>
Happy new year everyone!
To get the year started, we have the ParaView 4.3.0, Release Candidate 1
binaries available for download [1].
The detailed summary of the changes will follow. An exhaustive list of
features implemented and bugs fixed in this release can be found on the bug
tracker [2].
- The ParaView Team
[1] http://www.paraview.org/download/
[2] http://paraview.org/Bug/changelog_page.php
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From thomas.fastl at kcl.ac.uk Fri Jan 2 10:57:31 2015
From: thomas.fastl at kcl.ac.uk (Fastl, Thomas)
Date: Fri, 2 Jan 2015 15:57:31 +0000
Subject: [Paraview] Paraview/Load File and Take Screenshot
In-Reply-To: <CADHSJjCuOpPEzrsKf6JkdHf3+d4yGnNcF5rTV=YcpZypQ5mBfQ@mail.gmail.com>
References: <1419001275345.42183@kcl.ac.uk>,
<CADHSJjCuOpPEzrsKf6JkdHf3+d4yGnNcF5rTV=YcpZypQ5mBfQ@mail.gmail.com>
Message-ID: <1420214256940.85965@kcl.ac.uk>
Hello Utkarsh,
thank you for the information! I have been searching online for tutorials on how I can load and display .vtk-files in Paraview and realized that I can save a state as a Python script. This script provides me with all the information necessary to load the .vtk-files, change their mesh color and the view angle (I can run the script using pvbatch test.py). However, I could not figure out how I can take a screenshot from that stage and save the .png-file. The python script test.py looks like this:
# state file generated using paraview version 4.2.0
# ----------------------------------------------------------------
# setup views used in the visualization
# ----------------------------------------------------------------
#### import the simple module from the paraview
from paraview.simple import *
#### disable automatic camera reset on 'Show'
paraview.simple._DisableFirstRenderCameraReset()
# Create a new 'Render View'
renderView1 = CreateView('RenderView')
renderView1.ViewSize = [1613, 837]
renderView1.CenterOfRotation = [91.7317943572998, 165.96746826171875, 209.01107025146484]
renderView1.CameraPosition = [91.7317943572998, -19.57611529481801, 209.01107025146484]
renderView1.CameraFocalPoint = [91.7317943572998, 165.96746826171875, 209.01107025146484]
renderView1.CameraViewUp = [0.0, 0.0, 1.0]
renderView1.CameraParallelScale = 48.022213121002615
renderView1.Background = [0.32, 0.34, 0.43]
# ----------------------------------------------------------------
# setup the data processing pipelines
# ----------------------------------------------------------------
# create a new 'Legacy VTK Reader'
outputEndoSurfRegistrationvtk = LegacyVTKReader(FileNames=['/home/.../outputEndoSurfRegistrationvtk.vtk'])
# create a new 'Legacy VTK Reader'
atlasEndoSurfRegistrationvtk = LegacyVTKReader(FileNames=['/home/.../atlasEndoSurfRegistration.vtk'])
# ----------------------------------------------------------------
# setup the visualization in view 'renderView1'
# ----------------------------------------------------------------
# show data from atlasEndoSurfRegistrationvtk
atlasEndoSurfRegistrationvtkDisplay = Show(atlasEndoSurfRegistrationvtk, renderView1)
# trace defaults for the display properties.
atlasEndoSurfRegistrationvtkDisplay.ColorArrayName = [None, '']
atlasEndoSurfRegistrationvtkDisplay.DiffuseColor = [0.0, 0.0, 0.4980392156862745]
# show data from outputEndoSurfRegistrationvtk
outputEndoSurfRegistrationvtkDisplay = Show(outputEndoSurfRegistrationvtk, renderView1)
# trace defaults for the display properties.
outputEndoSurfRegistrationvtkDisplay.ColorArrayName = ['POINTS', '']
outputEndoSurfRegistrationvtkDisplay.DiffuseColor = [0.0, 0.3333333333333333, 0.0]
I guess that it will be only a simple command added at the end of the script which does the trick and would appreciate any help on that, thanks! Finally, happy new year to everyone! :-)
Best, Thomas
________________________________________
From: Utkarsh Ayachit <utkarsh.ayachit at kitware.com>
Sent: Friday, December 19, 2014 6:42 PM
To: Fastl, Thomas
Cc: paraview at paraview.org
Subject: Re: [Paraview] Paraview/Load File and Take Screenshot
You can indeed run a python script from terminal to automate such a
task. Use pvpython or pvbatch executables. Those are simply Python
interpreters with ParaView initialization stub. You can pass in a
script as command line argument and the application will quit once the
script is done.
Utkarsh
On Fri, Dec 19, 2014 at 9:01 AM, Fastl, Thomas <thomas.fastl at kcl.ac.uk> wrote:
> Dear Paraview-Community,
>
>
> I am currently running parameter sweeps and want to visually compare the
> result (a single .vtk file) to a base line (a single .vtk file). Therefore,
> I wanted to load both .vtk-files in Paraview, generate a screenshot of them
> and close Paraview again. Since I have several hundred simulations this task
> would be very tedious to do manually and hence I though I might be able to
> run a python script from the terminal to do this task in an automated
> fashion.
>
>
> I have found this link online
> (http://public.kitware.com/pipermail/paraview/2011-October/023026.html)
> which is not very promising, but also hoping that this feature would have
> been added since then. I already want to thank you in advance for any help,
> merry Xmas!
>
>
> Kind regards,
> ___________________________
> DI Thomas E Fastl, BSc
> Research Student
> King's College London
> School of Medicine
> Department of Biomedical Engineering
>
> The Rayne Institute
> 4th Floor, Lambeth Wing
> St Thomas' Hospital, London SE1 7EH
> Email: thomas.fastl at kcl.ac.uk
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
From samuelkey at bresnan.net Fri Jan 2 12:50:40 2015
From: samuelkey at bresnan.net (Samuel Key)
Date: Fri, 02 Jan 2015 10:50:40 -0700
Subject: [Paraview] Find Data filter having difficulty selecting a single
element in a one-element datum set?
Message-ID: <54A6DA70.8090309@bresnan.net>
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From phdggg at gmail.com Sat Jan 3 13:49:35 2015
From: phdggg at gmail.com (Mengda Wu)
Date: Sat, 3 Jan 2015 13:49:35 -0500
Subject: [Paraview] Transform filter bug? why some of the data arrays get
scaled?
Message-ID: <CAGqzA5X__peAedMH9LNC0ScDszhutvCE0zLitscKKZ5uJZtUJw@mail.gmail.com>
Hi All,
I found a possible bug of the paraview's transform filter. If I put just
the uniform scaling, e.g. set the scale to 10 10 10. Some of the
vector-type data arrays get scaled by 10 but not all. Why is that?
Thanks,
Mengda
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From grothausmann.roman at mh-hannover.de Mon Jan 5 08:24:27 2015
From: grothausmann.roman at mh-hannover.de (Dr. Roman Grothausmann)
Date: Mon, 05 Jan 2015 14:24:27 +0100
Subject: [Paraview] Paraview Programmable Source 3D Text
In-Reply-To: <CADHSJjAxhQzWtShM0=GKWGZiAmD-MWVWEOHnhaoLi1cQ_VQ5bw@mail.gmail.com>
References: <5242B6BA.7040306@ipf.tuwien.ac.at> <CADHSJjCRpKk-u_DtL_68wiyMLvo-_UKntez-ir_TMg0bKDS4Zg@mail.gmail.com> <52434C88.4040309@ipf.tuwien.ac.at> <524402D1.1020202@ipf.tuwien.ac.at>
<CADHSJjAxhQzWtShM0=GKWGZiAmD-MWVWEOHnhaoLi1cQ_VQ5bw@mail.gmail.com>
Message-ID: <54AA908B.3010105@mh-hannover.de>
Dear Utkarsh,
Needing the same thing as Willi, I've created a paraview plugin written in C++
doing basically the same as Your script. Would it be possible to achieve
something like vtkFollower does from within a c++ PV plugin such that the text
always faces the camera? An other idea would be to use Python in the animation
view to rotate the text as the camera orbits. This would be a workaround only
for animations, which would suffice for me. Do You thing that should be possible
if nothing else works?
Many thanks for looking into this.
Roman
On 26/09/13 19:52, Utkarsh Ayachit wrote:
> Alas, that's not easy to do, if at all possible, with Python source.
>
>
> On Thu, Sep 26, 2013 at 5:48 AM, Willi Karel <wk at ipf.tuwien.ac.at
> <mailto:wk at ipf.tuwien.ac.at>> wrote:
>
> Dear Utkarsh,
>
> would it be possible to synchronize the transform of the rendered texts
> to the transform of the camera, such that the planes in which the texts
> lie stay normal to the viewing direction?
> I'm aware of vtkFollower, but I'm not sure if it is applicable / how to
> make use of it in the context of ParaView / Programmable Source, as it
> derives from vtkActor.
>
> Many thanks!
> Willi.
>
> On 25.09.2013 22 <tel:25.09.2013%2022>:50, Willi Karel wrote:
> > Dear Utkarsh,
> > that works nice, thanks a lot!
> > Willi.
> >
> > On 25.09.2013 15 <tel:25.09.2013%2015>:25, Utkarsh Ayachit wrote:
> >> Willi,
> >>
> >> You can still use the programmable source for 3D text. With
> >> "vtkPolyData" as the chosen Output DataSet Type, you can use the
> >> attached script as the "Script".
> >>
> >>
> >>
> >>
> >>
> >>
> >>
> >>
> >>
> >> On Wed, Sep 25, 2013 at 6:11 AM, Willi Karel <wk at ipf.tuwien.ac.at
> <mailto:wk at ipf.tuwien.ac.at>
> >> <mailto:wk at ipf.tuwien.ac.at <mailto:wk at ipf.tuwien.ac.at>>> wrote:
> >>
> >> I'd like to insert various text strings programmatically into the scene
> >> at various 3D locations in world coordinates. To me, (Python)
> >> "Programmable Source" seems to be the appropriate tool for that purpose
> >> (which I successfully use to insert geometries into the scene). Is that
> >> possible using "Programmable Source"? Otherwise, is there any other
> >> method to do so?
> >>
> >> I am aware of Sources -> 3D Text,
> >> but that means a lot of manual, repetitive work.
> >>
> >> Many thanks!
> >> Willi.
> >> --
> >> _____ _____ _____ Technische Universit?t Wien
> >> DI Wilfried Karel /____// ___// / Dept. of Geodesy & Geoinform.
> >> wilfried.karel@ // __ / /__ / // / Research Groups Photogrammetry
> >> geo.tuwien.ac.at <http://geo.tuwien.ac.at> <http://geo.tuwien.ac.at>
> //__/// /__ / // /
> >> & Remote Sensing
> >> +43 1 58801 12244 <tel:%2B43%201%2058801%2012244>
> <tel:%2B43%201%2058801%2012244>
> >> /____//____//____/ Gusshausstr. 27-29, A-1040 Wien
> >> _______________________________________________
> >> Powered by www.kitware.com <http://www.kitware.com>
> <http://www.kitware.com>
> >>
> >> Visit other Kitware open-source projects at
> >> http://www.kitware.com/opensource/opensource.html
> >>
> >> Please keep messages on-topic and check the ParaView Wiki at:
> >> http://paraview.org/Wiki/ParaView
> >>
> >> Follow this link to subscribe/unsubscribe:
> >> http://www.paraview.org/mailman/listinfo/paraview
> >>
> >>
> >
>
> --
> _____ _____ _____ Technische Universit?t Wien
> DI Wilfried Karel /____// ___// / Dept. of Geodesy & Geoinform.
> wilfried.karel@ // __ / /__ / // / Research Groups Photogrammetry
> geo.tuwien.ac.at <http://geo.tuwien.ac.at> //__/// /__ / // / & Remote
> Sensing
> +43 1 58801 12244 <tel:%2B43%201%2058801%2012244> /____//____//____/
> Gusshausstr. 27-29, A-1040 Wien
>
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://www.paraview.org/mailman/listinfo/paraview
>
--
Dr. Roman Grothausmann
Tomographie und Digitale Bildverarbeitung
Tomography and Digital Image Analysis
Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
Medizinische Hochschule Hannover
Carl-Neuberg-Str. 1
D-30625 Hannover
Tel. +49 511 532-9574
From cory.quammen at kitware.com Mon Jan 5 08:31:31 2015
From: cory.quammen at kitware.com (Cory Quammen)
Date: Mon, 5 Jan 2015 08:31:31 -0500
Subject: [Paraview] [EXTERNAL] Re: Calculating the distance between two
surfaces as a function of time during large deformation process
In-Reply-To: <3b9ee9a91f074ec18719b8c88b54a68b@ES05AMSNLNT.srn.sandia.gov>
References: <7bff6ebdfcac49f9acad775d8c36fdf8@ES05AMSNLNT.srn.sandia.gov>
<D0BFB6AB.7457D%biddisco@cscs.ch>
<CAB5Fpx46z=YxM-uww5JOBQVj3jsLamOcU9NqBkXRBz=YfEimMw@mail.gmail.com>
<cb3bb8243e924fa29b5dbbceb17c3de1@ES05AMSNLNT.srn.sandia.gov>
<CAB5Fpx5ycazjqbN6rtGhPPTcNXQnCar4PoKEwGaqW42Lx02bMw@mail.gmail.com>
<3b9ee9a91f074ec18719b8c88b54a68b@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <CAB5Fpx5aoas6K7V02vFPtJ=qhsyQarjvN4dGeQhvXEe+7qjmaw@mail.gmail.com>
Hi Alan,
I was able to reproduce your problem. I'm not sure why the
programmable filter approach fails, though.
As an alternative, use the attached Poly Data Distance XML plugin
(it's better, anyway, since you don't have to enter the script each
time you use it). Try the following:
- launch ParaView
- Tools -> Manage Plugins... -> Load New...
- Change file type to .xml and select the attached XML plugin file
- open disk_out_ref.exo
- Merge blocks
- Extract surface
- Transform, shifting 20 units in X
- Use PolyData distance plugin
You should have the distance computed on each version of disk_out_ref.exo.
Please let me know how it goes.
Thanks,
Cory
On Wed, Dec 24, 2014 at 8:15 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> Cory,
> Excellent idea. I did try, and yes - I end up with polydata. However, I then don't see any output. Mind giving this a try? Utkarsh should have disk_out_ref.exo. What I did;
>
> Read in disk_out_ref.exo.
> merge blocks
> extract surface.
> read in disk_out_ref.exo (yes, I know I could have used the original. Being pre-Christmas brain dead.)
> transform. X translation 20. (disks now have a distance from each other of about 8.5 units.)
> merge blocks
> extract surface.
> highlight each extract surface.
> programmable filter. Paste in your code.
>
> No output variable named "distance" to be found.
>
> Thanks,
>
> Alan
>
> -----Original Message-----
> From: Cory Quammen [mailto:cory.quammen at kitware.com]
> Sent: Wednesday, December 24, 2014 3:10 PM
> To: Scott, W Alan
> Cc: Biddiscombe, John A.; paraview at paraview.org
> Subject: Re: [EXTERNAL] Re: [Paraview] Calculating the distance between two surfaces as a function of time during large deformation process
>
> Alan,
>
> disk_out_ref.ex2 -> Merge Blocks -> Extract Surface should get you polydata that you can feed into the programmable filter.
>
> Thanks,
> Cory
>
> On Wed, Dec 24, 2014 at 12:44 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>> Very nice and simple! Thanks.
>>
>> I tried running it on two instances of disk_out_ref.exo, and it complained that it has MultiBlock data as inputs, but needs PolyData. Being a neophyte with the programmable filter, how can I either convert my data, or convert the filter to use multiblock data?
>>
>> Thanks!!
>>
>> Alan
>>
>> -----Original Message-----
>> From: Cory Quammen [mailto:cory.quammen at kitware.com]
>> Sent: Tuesday, December 23, 2014 8:32 PM
>> To: Biddiscombe, John A.
>> Cc: Scott, W Alan; paraview at paraview.org
>> Subject: [EXTERNAL] Re: [Paraview] Calculating the distance between
>> two surfaces as a function of time during large deformation process
>>
>> Hi Alan,
>>
>> There is a filter in VTK called vtkDistancePolyDataFilter. It takes two polydata as inputs and produces up two two outputs, each with an the (optionally) signed distance from each point in the first polydata to the closest point on the second polydata. If the polydata inputs overlap and the signed distance is requested, the distance may be negative, which means that the point at which the distance is computed is inside the other polydata.
>>
>> Attached is a ParaView 4.2 state file with a Programmable Filter that exposes the vtkDistancePolyDataFilter. It could also be exposed as an XML plugin.
>>
>> Cheers,
>> Cory
>>
>> On Tue, Dec 23, 2014 at 6:20 PM, Biddiscombe, John A. <biddisco at cscs.ch> wrote:
>>> The way I did this was to use one surface as a ?source? - fire rays
>>> from this surface along the surface normal until they hit the ?target?
>>> and return the distance. Then use the distances for every source node
>>> as a new field which is output. One requires ideally a source mesh
>>> with quite dense points to get a good sampling.
>>>
>>> JB
>>>
>>> On 23/12/14 21:02, "Scott, W Alan" <wascott at sandia.gov> wrote:
>>>
>>>>I have a user that asked the following question. Any ideas how to do
>>>>this?
>>>>
>>>>Thanks,
>>>>
>>>>Alan
>>>>
>>>>
>>>>Greetings,
>>>>
>>>>I need to quantify the distance between two curved and deforming
>>>>surfaces (large deformation mechanical analysis) as a function of
>>>>time in batch mode. I don't know (and don't want to know) which two
>>>>node points are the closest. Could you outline how you would code up something like this ?
>>>>
>>>>George
>>>>
>>>>
>>>>
>>>>
>>>>_______________________________________________
>>>>Powered by www.kitware.com
>>>>
>>>>Visit other Kitware open-source projects at
>>>>http://www.kitware.com/opensource/opensource.html
>>>>
>>>>Please keep messages on-topic and check the ParaView Wiki at:
>>>>http://paraview.org/Wiki/ParaView
>>>>
>>>>Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>
>>>>Follow this link to subscribe/unsubscribe:
>>>>http://public.kitware.com/mailman/listinfo/paraview
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>>
>> --
>> Cory Quammen
>> R&D Engineer
>> Kitware, Inc.
>
>
>
> --
> Cory Quammen
> R&D Engineer
> Kitware, Inc.
--
Cory Quammen
R&D Engineer
Kitware, Inc.
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From cory.quammen at kitware.com Mon Jan 5 08:57:01 2015
From: cory.quammen at kitware.com (Cory Quammen)
Date: Mon, 5 Jan 2015 08:57:01 -0500
Subject: [Paraview] Paraview Programmable Source 3D Text
In-Reply-To: <54AA908B.3010105@mh-hannover.de>
References: <5242B6BA.7040306@ipf.tuwien.ac.at>
<CADHSJjCRpKk-u_DtL_68wiyMLvo-_UKntez-ir_TMg0bKDS4Zg@mail.gmail.com>
<52434C88.4040309@ipf.tuwien.ac.at>
<524402D1.1020202@ipf.tuwien.ac.at>
<CADHSJjAxhQzWtShM0=GKWGZiAmD-MWVWEOHnhaoLi1cQ_VQ5bw@mail.gmail.com>
<54AA908B.3010105@mh-hannover.de>
Message-ID: <CAB5Fpx6KVcXFCfL92JxYJhrab8+wR9FuTyp-DfDrSvwVb9KB8g@mail.gmail.com>
Hi Roman,
A representation plugin could probably do this. It would just need to
set its internal actor to an instance of vtkFollower and set the
camera from the view's renderer, which could be set by overriding the
AddToView(vtkView* view) method in your custom representation.
I hope that helps,
Cory
On Mon, Jan 5, 2015 at 8:24 AM, Dr. Roman Grothausmann
<grothausmann.roman at mh-hannover.de> wrote:
> Dear Utkarsh,
>
>
> Needing the same thing as Willi, I've created a paraview plugin written in
> C++ doing basically the same as Your script. Would it be possible to achieve
> something like vtkFollower does from within a c++ PV plugin such that the
> text always faces the camera? An other idea would be to use Python in the
> animation view to rotate the text as the camera orbits. This would be a
> workaround only for animations, which would suffice for me. Do You thing
> that should be possible if nothing else works?
>
> Many thanks for looking into this.
> Roman
>
> On 26/09/13 19:52, Utkarsh Ayachit wrote:
>>
>> Alas, that's not easy to do, if at all possible, with Python source.
>>
>>
>> On Thu, Sep 26, 2013 at 5:48 AM, Willi Karel <wk at ipf.tuwien.ac.at
>> <mailto:wk at ipf.tuwien.ac.at>> wrote:
>>
>> Dear Utkarsh,
>>
>> would it be possible to synchronize the transform of the rendered
>> texts
>> to the transform of the camera, such that the planes in which the
>> texts
>> lie stay normal to the viewing direction?
>> I'm aware of vtkFollower, but I'm not sure if it is applicable / how
>> to
>> make use of it in the context of ParaView / Programmable Source, as it
>> derives from vtkActor.
>>
>> Many thanks!
>> Willi.
>>
>> On 25.09.2013 22 <tel:25.09.2013%2022>:50, Willi Karel wrote:
>> > Dear Utkarsh,
>> > that works nice, thanks a lot!
>> > Willi.
>> >
>> > On 25.09.2013 15 <tel:25.09.2013%2015>:25, Utkarsh Ayachit wrote:
>> >> Willi,
>> >>
>> >> You can still use the programmable source for 3D text. With
>> >> "vtkPolyData" as the chosen Output DataSet Type, you can use the
>> >> attached script as the "Script".
>> >>
>> >>
>> >>
>> >>
>> >>
>> >>
>> >>
>> >>
>> >>
>> >> On Wed, Sep 25, 2013 at 6:11 AM, Willi Karel <wk at ipf.tuwien.ac.at
>> <mailto:wk at ipf.tuwien.ac.at>
>> >> <mailto:wk at ipf.tuwien.ac.at <mailto:wk at ipf.tuwien.ac.at>>> wrote:
>> >>
>> >> I'd like to insert various text strings programmatically into
>> the scene
>> >> at various 3D locations in world coordinates. To me, (Python)
>> >> "Programmable Source" seems to be the appropriate tool for
>> that purpose
>> >> (which I successfully use to insert geometries into the
>> scene). Is that
>> >> possible using "Programmable Source"? Otherwise, is there any
>> other
>> >> method to do so?
>> >>
>> >> I am aware of Sources -> 3D Text,
>> >> but that means a lot of manual, repetitive work.
>> >>
>> >> Many thanks!
>> >> Willi.
>> >> --
>> >> _____ _____ _____ Technische
>> Universit?t Wien
>> >> DI Wilfried Karel /____// ___// / Dept. of Geodesy &
>> Geoinform.
>> >> wilfried.karel@ // __ / /__ / // / Research Groups
>> Photogrammetry
>> >> geo.tuwien.ac.at <http://geo.tuwien.ac.at>
>> <http://geo.tuwien.ac.at>
>> //__/// /__ / // /
>> >> & Remote Sensing
>> >> +43 1 58801 12244 <tel:%2B43%201%2058801%2012244>
>> <tel:%2B43%201%2058801%2012244>
>> >> /____//____//____/ Gusshausstr. 27-29, A-1040 Wien
>> >> _______________________________________________
>> >> Powered by www.kitware.com <http://www.kitware.com>
>> <http://www.kitware.com>
>> >>
>> >> Visit other Kitware open-source projects at
>> >> http://www.kitware.com/opensource/opensource.html
>> >>
>> >> Please keep messages on-topic and check the ParaView Wiki at:
>> >> http://paraview.org/Wiki/ParaView
>> >>
>> >> Follow this link to subscribe/unsubscribe:
>> >> http://www.paraview.org/mailman/listinfo/paraview
>> >>
>> >>
>> >
>>
>> --
>> _____ _____ _____ Technische Universit?t
>> Wien
>> DI Wilfried Karel /____// ___// / Dept. of Geodesy &
>> Geoinform.
>> wilfried.karel@ // __ / /__ / // / Research Groups
>> Photogrammetry
>> geo.tuwien.ac.at <http://geo.tuwien.ac.at> //__/// /__ / // / &
>> Remote
>> Sensing
>> +43 1 58801 12244 <tel:%2B43%201%2058801%2012244> /____//____//____/
>> Gusshausstr. 27-29, A-1040 Wien
>>
>>
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://www.paraview.org/mailman/listinfo/paraview
>>
>
> --
> Dr. Roman Grothausmann
>
> Tomographie und Digitale Bildverarbeitung
> Tomography and Digital Image Analysis
>
> Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
> Medizinische Hochschule Hannover
> Carl-Neuberg-Str. 1
> D-30625 Hannover
>
> Tel. +49 511 532-9574
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
--
Cory Quammen
R&D Engineer
Kitware, Inc.
From vlc at illinois.edu Mon Jan 5 08:40:49 2015
From: vlc at illinois.edu (Le Chenadec, Vincent)
Date: Mon, 5 Jan 2015 13:40:49 +0000
Subject: [Paraview] Parallel XML VTK with arbitrary polyhedra
Message-ID: <D0D052EC.B32%vlc@illinois.edu>
Hi there,
I?m attempting to write a parallel XML file to source unstructured data to read in Paraview (written from an in-house fortran CFD code). Everything works out of the box when I use zoo elements (hexahedra, tetrahedra, ?), not so when using arbitrary polyhedra.
I?m attaching a sample test (a sphere discretized on a 16x16x16 lattice, see sphere1.png). The .vtu files I dump seem to be valid, for the external boundaries are displayed accurately when visualizing them separately (see attached sphere2.png to see the partitioning).
When loading the .pvtu file, however, the external boundary considers only the zoo elements (hex only, in this case), not the polyhedral cells. Paraview also crashes whenever I apply a filter, which suggests I?m doing something wrong.
I?m most likely missing something in the .pvtu file? I tried a few things, e.g. adding a <PCells/> element where with <PDataArray/>?s referencing the faces and faceoffsets arrays specific to polyhedral cells, but no success so far? Any input is much welcome at this point!
Thanks,
Vincent
PS: I?m using the 4.2.0 built of Paraview. The ASCII .vtu and .pvtu files I use are attached in a tarball.
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From grothausmann.roman at mh-hannover.de Mon Jan 5 10:21:31 2015
From: grothausmann.roman at mh-hannover.de (Dr. Roman Grothausmann)
Date: Mon, 05 Jan 2015 16:21:31 +0100
Subject: [Paraview] Paraview Programmable Source 3D Text
In-Reply-To: <CAB5Fpx6KVcXFCfL92JxYJhrab8+wR9FuTyp-DfDrSvwVb9KB8g@mail.gmail.com>
References: <5242B6BA.7040306@ipf.tuwien.ac.at> <CADHSJjCRpKk-u_DtL_68wiyMLvo-_UKntez-ir_TMg0bKDS4Zg@mail.gmail.com> <52434C88.4040309@ipf.tuwien.ac.at> <524402D1.1020202@ipf.tuwien.ac.at> <CADHSJjAxhQzWtShM0=GKWGZiAmD-MWVWEOHnhaoLi1cQ_VQ5bw@mail.gmail.com> <54AA908B.3010105@mh-hannover.de>
<CAB5Fpx6KVcXFCfL92JxYJhrab8+wR9FuTyp-DfDrSvwVb9KB8g@mail.gmail.com>
Message-ID: <54AAABFB.1010505@mh-hannover.de>
Dear Cory,
Many thanks for Your suggestion, I wouldn't have thought of a representation
plugin. I guess You mean the plugin type described here:
http://www.paraview.org/Wiki/ParaView/Plugin_HowTo#Adding_new_Representations_for_3D_View_using_Plugins_.2A_new_in_version_3.7
I'll give it a try.
Thanks again for the hint
Roman
On 05/01/15 14:57, Cory Quammen wrote:
> Hi Roman,
>
> A representation plugin could probably do this. It would just need to
> set its internal actor to an instance of vtkFollower and set the
> camera from the view's renderer, which could be set by overriding the
> AddToView(vtkView* view) method in your custom representation.
>
> I hope that helps,
> Cory
>
> On Mon, Jan 5, 2015 at 8:24 AM, Dr. Roman Grothausmann
> <grothausmann.roman at mh-hannover.de> wrote:
>> Dear Utkarsh,
>>
>>
>> Needing the same thing as Willi, I've created a paraview plugin written in
>> C++ doing basically the same as Your script. Would it be possible to achieve
>> something like vtkFollower does from within a c++ PV plugin such that the
>> text always faces the camera? An other idea would be to use Python in the
>> animation view to rotate the text as the camera orbits. This would be a
>> workaround only for animations, which would suffice for me. Do You thing
>> that should be possible if nothing else works?
>>
>> Many thanks for looking into this.
>> Roman
>>
>> On 26/09/13 19:52, Utkarsh Ayachit wrote:
>>>
>>> Alas, that's not easy to do, if at all possible, with Python source.
>>>
>>>
>>> On Thu, Sep 26, 2013 at 5:48 AM, Willi Karel <wk at ipf.tuwien.ac.at
>>> <mailto:wk at ipf.tuwien.ac.at>> wrote:
>>>
>>> Dear Utkarsh,
>>>
>>> would it be possible to synchronize the transform of the rendered
>>> texts
>>> to the transform of the camera, such that the planes in which the
>>> texts
>>> lie stay normal to the viewing direction?
>>> I'm aware of vtkFollower, but I'm not sure if it is applicable / how
>>> to
>>> make use of it in the context of ParaView / Programmable Source, as it
>>> derives from vtkActor.
>>>
>>> Many thanks!
>>> Willi.
>>>
>>> On 25.09.2013 22 <tel:25.09.2013%2022>:50, Willi Karel wrote:
>>> > Dear Utkarsh,
>>> > that works nice, thanks a lot!
>>> > Willi.
>>> >
>>> > On 25.09.2013 15 <tel:25.09.2013%2015>:25, Utkarsh Ayachit wrote:
>>> >> Willi,
>>> >>
>>> >> You can still use the programmable source for 3D text. With
>>> >> "vtkPolyData" as the chosen Output DataSet Type, you can use the
>>> >> attached script as the "Script".
>>> >>
>>> >>
>>> >>
>>> >>
>>> >>
>>> >>
>>> >>
>>> >>
>>> >>
>>> >> On Wed, Sep 25, 2013 at 6:11 AM, Willi Karel <wk at ipf.tuwien.ac.at
>>> <mailto:wk at ipf.tuwien.ac.at>
>>> >> <mailto:wk at ipf.tuwien.ac.at <mailto:wk at ipf.tuwien.ac.at>>> wrote:
>>> >>
>>> >> I'd like to insert various text strings programmatically into
>>> the scene
>>> >> at various 3D locations in world coordinates. To me, (Python)
>>> >> "Programmable Source" seems to be the appropriate tool for
>>> that purpose
>>> >> (which I successfully use to insert geometries into the
>>> scene). Is that
>>> >> possible using "Programmable Source"? Otherwise, is there any
>>> other
>>> >> method to do so?
>>> >>
>>> >> I am aware of Sources -> 3D Text,
>>> >> but that means a lot of manual, repetitive work.
>>> >>
>>> >> Many thanks!
>>> >> Willi.
>>> >> --
>>> >> _____ _____ _____ Technische
>>> Universit?t Wien
>>> >> DI Wilfried Karel /____// ___// / Dept. of Geodesy &
>>> Geoinform.
>>> >> wilfried.karel@ // __ / /__ / // / Research Groups
>>> Photogrammetry
>>> >> geo.tuwien.ac.at <http://geo.tuwien.ac.at>
>>> <http://geo.tuwien.ac.at>
>>> //__/// /__ / // /
>>> >> & Remote Sensing
>>> >> +43 1 58801 12244 <tel:%2B43%201%2058801%2012244>
>>> <tel:%2B43%201%2058801%2012244>
>>> >> /____//____//____/ Gusshausstr. 27-29, A-1040 Wien
>>> >> _______________________________________________
>>> >> Powered by www.kitware.com <http://www.kitware.com>
>>> <http://www.kitware.com>
>>> >>
>>> >> Visit other Kitware open-source projects at
>>> >> http://www.kitware.com/opensource/opensource.html
>>> >>
>>> >> Please keep messages on-topic and check the ParaView Wiki at:
>>> >> http://paraview.org/Wiki/ParaView
>>> >>
>>> >> Follow this link to subscribe/unsubscribe:
>>> >> http://www.paraview.org/mailman/listinfo/paraview
>>> >>
>>> >>
>>> >
>>>
>>> --
>>> _____ _____ _____ Technische Universit?t
>>> Wien
>>> DI Wilfried Karel /____// ___// / Dept. of Geodesy &
>>> Geoinform.
>>> wilfried.karel@ // __ / /__ / // / Research Groups
>>> Photogrammetry
>>> geo.tuwien.ac.at <http://geo.tuwien.ac.at> //__/// /__ / // / &
>>> Remote
>>> Sensing
>>> +43 1 58801 12244 <tel:%2B43%201%2058801%2012244> /____//____//____/
>>> Gusshausstr. 27-29, A-1040 Wien
>>>
>>>
>>>
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://www.paraview.org/mailman/listinfo/paraview
>>>
>>
>> --
>> Dr. Roman Grothausmann
>>
>> Tomographie und Digitale Bildverarbeitung
>> Tomography and Digital Image Analysis
>>
>> Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
>> Medizinische Hochschule Hannover
>> Carl-Neuberg-Str. 1
>> D-30625 Hannover
>>
>> Tel. +49 511 532-9574
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>
>
>
--
Dr. Roman Grothausmann
Tomographie und Digitale Bildverarbeitung
Tomography and Digital Image Analysis
Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
Medizinische Hochschule Hannover
Carl-Neuberg-Str. 1
D-30625 Hannover
Tel. +49 511 532-9574
From dan.lipsa at kitware.com Mon Jan 5 10:37:14 2015
From: dan.lipsa at kitware.com (Dan Lipsa)
Date: Mon, 5 Jan 2015 10:37:14 -0500
Subject: [Paraview] EnSightReader: Change input file
In-Reply-To: <54953CDA.9070206@tu-braunschweig.de>
References: <54621190.8080107@tu-braunschweig.de>
<CADHSJjAbDumoAfK34Uw6X8sgec7s=9chDKx2+5CzCLRiV5+QEA@mail.gmail.com>
<CADwGrVrr+kaNMqgFn3caTnF1npoa=sk7pnvUzcPws3cO43Kgeg@mail.gmail.com>
<54953CDA.9070206@tu-braunschweig.de>
Message-ID: <CADwGrVoQVH0i_xn5-aJDdS-ady9sp3=4jOgQrcP2Rn+g39h0HQ@mail.gmail.com>
On Sat, Dec 20, 2014 at 4:09 AM, Ian Krukow <i.krukow at tu-braunschweig.de>
wrote:
> Hi Dan,
>
> thanks for the patch, but unfortunately I have not been able to test it
> yet, though I tried different things.
>
> I work with pvpython on a compute server with Ubuntu 12.04. For
> configuration I have CMake 2.8.7, and I built ParaView 3.14.1 a while ago.
> For ParaView 4.2, I need at least CMake 2.8.8, but I could not get it to
> work on that system. Our admin supposed that there might be library
> problems between Ubuntu 12.04 and newer CMake versions, and it may not work
> at all. Therefore I could not build ParaView 4.2.
>
What is the problem you see with the new cmake? cmake is tested on many
platforms so it should work on ubuntu 12.04 as well.
> I tried applying the patch to ParaView 3.14.1 instead, but I had the same
> result as before. Maybe it is just not the right thing to do, I am not
> familiar with these things.
>
> Then I switched to my desktop PC with Windows 7, where I set up the
> building process. When I run the configuration in CMake, as soon as I
> enable python, I get the error
>
> CMake Error at VTK/CMake/ExternalData.cmake:176 (add_test):
> add_test given test NAME "pvpythonPython-TestAnnotateAttributeData"
> which already exists in this directory.
> Call Stack (most recent call first):
> VTK/CMake/vtkTestingMacros.cmake:431 (ExternalData_add_test)
> CMake/ParaViewTestingMacros.cmake:44 (vtk_add_test_python)
> Applications/ParaView/Testing/Python/CMakeLists.txt:82
> (paraview_add_test_pvbatch)
>
> even without the patch. Can you tell me what to do about it?
>
Do you do the config/build in the source directory? If yes, could you try
it in a separate build directory?
Dan
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From vlc at illinois.edu Mon Jan 5 14:26:39 2015
From: vlc at illinois.edu (Le Chenadec, Vincent)
Date: Mon, 5 Jan 2015 19:26:39 +0000
Subject: [Paraview] Parallel XML VTK with arbitrary polyhedra
In-Reply-To: <D0D052EC.B32%vlc@illinois.edu>
References: <D0D052EC.B32%vlc@illinois.edu>
Message-ID: <D0D0A370.B73%vlc@illinois.edu>
Hi,
I figured using a PVD file does the job, for example
<VTKFile type="Collection" version="1.0" byte_order="LittleEndian" header_type="UInt64">
<Collection>
<DataSet part="0" file="sphere_0.vtu"/>
<DataSet part="1" file="sphere_1.vtu"/>
<DataSet part="2" file="sphere_2.vtu"/>
<DataSet part="3" file="sphere_3.vtu"/>
<DataSet part="4" file="sphere_4.vtu"/>
<DataSet part="5" file="sphere_5.vtu"/>
<DataSet part="6" file="sphere_6.vtu"/>
<DataSet part="7" file="sphere_7.vtu"/>
</Collection>
</VTKFile>
I?m still interested in getting .pvtu files to work though, if anyone has an idea of how to get it to work with polyhedral cells?
Best,
Vincent
From: "<Le Chenadec>", Vincent Le Chenadec <vlc at illinois.edu<mailto:vlc at illinois.edu>>
Date: Monday, January 5, 2015 at 2:40 PM
To: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: Parallel XML VTK with arbitrary polyhedra
Hi there,
I?m attempting to write a parallel XML file to source unstructured data to read in Paraview (written from an in-house fortran CFD code). Everything works out of the box when I use zoo elements (hexahedra, tetrahedra, ?), not so when using arbitrary polyhedra.
I?m attaching a sample test (a sphere discretized on a 16x16x16 lattice, see sphere1.png). The .vtu files I dump seem to be valid, for the external boundaries are displayed accurately when visualizing them separately (see attached sphere2.png to see the partitioning).
When loading the .pvtu file, however, the external boundary considers only the zoo elements (hex only, in this case), not the polyhedral cells. Paraview also crashes whenever I apply a filter, which suggests I?m doing something wrong.
I?m most likely missing something in the .pvtu file? I tried a few things, e.g. adding a <PCells/> element where with <PDataArray/>?s referencing the faces and faceoffsets arrays specific to polyhedral cells, but no success so far? Any input is much welcome at this point!
Thanks,
Vincent
PS: I?m using the 4.2.0 built of Paraview. The ASCII .vtu and .pvtu files I use are attached in a tarball.
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From wascott at sandia.gov Mon Jan 5 14:36:57 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Mon, 5 Jan 2015 19:36:57 +0000
Subject: [Paraview] [EXTERNAL] Transform filter bug? why some of the
data arrays get scaled?
In-Reply-To: <CAGqzA5X__peAedMH9LNC0ScDszhutvCE0zLitscKKZ5uJZtUJw@mail.gmail.com>
References: <CAGqzA5X__peAedMH9LNC0ScDszhutvCE0zLitscKKZ5uJZtUJw@mail.gmail.com>
Message-ID: <1dfac169a88445bbab8e229bc6084113@ES05AMSNLNT.srn.sandia.gov>
Mengda,
I believe that the transform filter is just scaling the space ? i.e., the X, Y and Z data. If you want to scale data arrays, use the Calculator filter.
Alan
From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Mengda Wu
Sent: Saturday, January 03, 2015 11:50 AM
To: paraview at paraview.org
Subject: [EXTERNAL] [Paraview] Transform filter bug? why some of the data arrays get scaled?
Hi All,
I found a possible bug of the paraview's transform filter. If I put just the uniform scaling, e.g. set the scale to 10 10 10. Some of the vector-type data arrays get scaled by 10 but not all. Why is that?
Thanks,
Mengda
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From wascott at sandia.gov Mon Jan 5 15:09:31 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Mon, 5 Jan 2015 20:09:31 +0000
Subject: [Paraview] Gradient filters
In-Reply-To: <648D2290-FC1B-411F-ACE8-1F9671707C12@sandia.gov>
References: <5a9967f5859d4b1e8e83cac41a703222@ES05AMSNLNT.srn.sandia.gov>
<648D2290-FC1B-411F-ACE8-1F9671707C12@sandia.gov>
Message-ID: <b09c7d073ede464bb8a61c1533d89c88@ES05AMSNLNT.srn.sandia.gov>
Thanks, and excellent suggestions. I will write these output window features up.
Alan
From: Moreland, Kenneth
Sent: Wednesday, December 31, 2014 12:01 PM
To: Scott, W Alan
Cc: paraview at paraview.org
Subject: Re: [Paraview] Gradient filters
The gradient filter works specifically on image-based data. (An AMR grid is essentially a hierarchy of image data.) It computes the gradient by taking differences in the x, y, and z directions of the grid. The unstructured gradient filter makes no such assumption about the directionality of the edges. Instead, it computes the gradients within the cells and averages the results. The intention is to get valid results on unstructured grids, but the implementation actually works on any dataset object. Thus, it will work on image-based data, but slower (and will probably give a slightly different answer).
I am guessing that the warning message you are getting is only supposed to be outputted once, but the filter is being independently executed on each block of the AMR and so gives the warning each time. Rather than fix this specific instance, it might be better to have a smarter output window that recognizes when a message is repeated and reports only once with an indicator of how many times it was raised. Now that I think about it, it would be nice if the output window also cleaned up all messages to hide some of the diagnostic information that comes with every message (like file location). That would make warnings/errors more helpful in general.
-Ken
Sent from my iPad so blame autocorrect.
On Dec 24, 2014, at 6:50 PM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov>> wrote:
What is the difference between the Gradient and Gradient Of Unstructured Dataset filters? The Gradient filter puts out a few million lines of warning with a structured (CTH AMR) dataset, but the Gradient of Unstructured Dataset filter seems to work fine with structured data (once again, CTH AMR data).
Thanks,
Alan
--------------------------------------------------------
W. Alan Scott
ParaView Support Manager
SAIC
Sandia National Laboratories, MS 0822
Org 9326 - Building 880 A1-C
(505) 284-0932 FAX (505) 284-5619
---------------------------------------------------------
_______________________________________________
Powered by www.kitware.com<http://www.kitware.com>
Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
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From wascott at sandia.gov Mon Jan 5 17:28:20 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Mon, 5 Jan 2015 22:28:20 +0000
Subject: [Paraview] [EXTERNAL] Re: Calculating the distance between two
surfaces as a function of time during large deformation process
In-Reply-To: <CADHSJjC3Db4ZcZcG4H8mduy2RZxN95A=2P8jn9zrOkUWEvdciw@mail.gmail.com>
References: <7bff6ebdfcac49f9acad775d8c36fdf8@ES05AMSNLNT.srn.sandia.gov>
<D0BFB6AB.7457D%biddisco@cscs.ch>
<CAB5Fpx46z=YxM-uww5JOBQVj3jsLamOcU9NqBkXRBz=YfEimMw@mail.gmail.com>
<cb3bb8243e924fa29b5dbbceb17c3de1@ES05AMSNLNT.srn.sandia.gov>
<CAB5Fpx5ycazjqbN6rtGhPPTcNXQnCar4PoKEwGaqW42Lx02bMw@mail.gmail.com>
<3b9ee9a91f074ec18719b8c88b54a68b@ES05AMSNLNT.srn.sandia.gov>
<CAB5Fpx6fjTjS4u6JFBOp5sey-jWLyK7O=ger9Fnx1vgxsWmQig@mail.gmail.com>
<CADHSJjC3Db4ZcZcG4H8mduy2RZxN95A=2P8jn9zrOkUWEvdciw@mail.gmail.com>
Message-ID: <f30899a051a245dc8c2dea4da14239bb@ES05AMSNLNT.srn.sandia.gov>
disk_out_ref.exo and disk_out_ref.ex2 are the same. I probably created a copy, so I could test both extensions ? and the madness progressed from there. My bad. Anyway, all disk_out_ref?s are the same.
Alan
From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
Sent: Thursday, January 01, 2015 8:51 AM
To: Cory Quammen
Cc: Scott, W Alan; paraview at paraview.org
Subject: Re: [Paraview] [EXTERNAL] Re: Calculating the distance between two surfaces as a function of time during large deformation process
Cory,
disk_out_ref.exo and disk_out_ref.ex2 are one and the same, I think. I am not aware of a different disk_out_ref.exo
On Wed, Dec 31, 2014 at 10:10 PM, Cory Quammen <cory.quammen at kitware.com<mailto:cory.quammen at kitware.com>> wrote:
Hi Alan,
Is the file disk_out_ref.exo different from the file disk_out_ref.ex2
that comes with the ParaView test data?
Thanks,
Cory
On Wed, Dec 24, 2014 at 8:15 PM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov>> wrote:
> Cory,
> Excellent idea. I did try, and yes - I end up with polydata. However, I then don't see any output. Mind giving this a try? Utkarsh should have disk_out_ref.exo. What I did;
>
> Read in disk_out_ref.exo.
> merge blocks
> extract surface.
> read in disk_out_ref.exo (yes, I know I could have used the original. Being pre-Christmas brain dead.)
> transform. X translation 20. (disks now have a distance from each other of about 8.5 units.)
> merge blocks
> extract surface.
> highlight each extract surface.
> programmable filter. Paste in your code.
>
> No output variable named "distance" to be found.
>
> Thanks,
>
> Alan
>
> -----Original Message-----
> From: Cory Quammen [mailto:cory.quammen at kitware.com<mailto:cory.quammen at kitware.com>]
> Sent: Wednesday, December 24, 2014 3:10 PM
> To: Scott, W Alan
> Cc: Biddiscombe, John A.; paraview at paraview.org<mailto:paraview at paraview.org>
> Subject: Re: [EXTERNAL] Re: [Paraview] Calculating the distance between two surfaces as a function of time during large deformation process
>
> Alan,
>
> disk_out_ref.ex2 -> Merge Blocks -> Extract Surface should get you polydata that you can feed into the programmable filter.
>
> Thanks,
> Cory
>
> On Wed, Dec 24, 2014 at 12:44 PM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov>> wrote:
>> Very nice and simple! Thanks.
>>
>> I tried running it on two instances of disk_out_ref.exo, and it complained that it has MultiBlock data as inputs, but needs PolyData. Being a neophyte with the programmable filter, how can I either convert my data, or convert the filter to use multiblock data?
>>
>> Thanks!!
>>
>> Alan
>>
>> -----Original Message-----
>> From: Cory Quammen [mailto:cory.quammen at kitware.com<mailto:cory.quammen at kitware.com>]
>> Sent: Tuesday, December 23, 2014 8:32 PM
>> To: Biddiscombe, John A.
>> Cc: Scott, W Alan; paraview at paraview.org<mailto:paraview at paraview.org>
>> Subject: [EXTERNAL] Re: [Paraview] Calculating the distance between
>> two surfaces as a function of time during large deformation process
>>
>> Hi Alan,
>>
>> There is a filter in VTK called vtkDistancePolyDataFilter. It takes two polydata as inputs and produces up two two outputs, each with an the (optionally) signed distance from each point in the first polydata to the closest point on the second polydata. If the polydata inputs overlap and the signed distance is requested, the distance may be negative, which means that the point at which the distance is computed is inside the other polydata.
>>
>> Attached is a ParaView 4.2 state file with a Programmable Filter that exposes the vtkDistancePolyDataFilter. It could also be exposed as an XML plugin.
>>
>> Cheers,
>> Cory
>>
>> On Tue, Dec 23, 2014 at 6:20 PM, Biddiscombe, John A. <biddisco at cscs.ch<mailto:biddisco at cscs.ch>> wrote:
>>> The way I did this was to use one surface as a ?source? - fire rays
>>> from this surface along the surface normal until they hit the ?target?
>>> and return the distance. Then use the distances for every source node
>>> as a new field which is output. One requires ideally a source mesh
>>> with quite dense points to get a good sampling.
>>>
>>> JB
>>>
>>> On 23/12/14 21:02, "Scott, W Alan" <wascott at sandia.gov<mailto:wascott at sandia.gov>> wrote:
>>>
>>>>I have a user that asked the following question. Any ideas how to do
>>>>this?
>>>>
>>>>Thanks,
>>>>
>>>>Alan
>>>>
>>>>
>>>>Greetings,
>>>>
>>>>I need to quantify the distance between two curved and deforming
>>>>surfaces (large deformation mechanical analysis) as a function of
>>>>time in batch mode. I don't know (and don't want to know) which two
>>>>node points are the closest. Could you outline how you would code up something like this ?
>>>>
>>>>George
>>>>
>>>>
>>>>
>>>>
>>>>_______________________________________________
>>>>Powered by www.kitware.com<http://www.kitware.com>
>>>>
>>>>Visit other Kitware open-source projects at
>>>>http://www.kitware.com/opensource/opensource.html
>>>>
>>>>Please keep messages on-topic and check the ParaView Wiki at:
>>>>http://paraview.org/Wiki/ParaView
>>>>
>>>>Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>
>>>>Follow this link to subscribe/unsubscribe:
>>>>http://public.kitware.com/mailman/listinfo/paraview
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com<http://www.kitware.com>
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>>
>> --
>> Cory Quammen
>> R&D Engineer
>> Kitware, Inc.
>
>
>
> --
> Cory Quammen
> R&D Engineer
> Kitware, Inc.
--
Cory Quammen
R&D Engineer
Kitware, Inc.
_______________________________________________
Powered by www.kitware.com<http://www.kitware.com>
Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
Search the list archives at: http://markmail.org/search/?q=ParaView
Follow this link to subscribe/unsubscribe:
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From kmorel at sandia.gov Mon Jan 5 17:56:43 2015
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Mon, 5 Jan 2015 22:56:43 +0000
Subject: [Paraview] [EXTERNAL] Transform filter bug? why some of the
data arrays get scaled?
In-Reply-To: <1dfac169a88445bbab8e229bc6084113@ES05AMSNLNT.srn.sandia.gov>
References: <CAGqzA5X__peAedMH9LNC0ScDszhutvCE0zLitscKKZ5uJZtUJw@mail.gmail.com>
<1dfac169a88445bbab8e229bc6084113@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <D0D06128.1F4BD%kmorel@sandia.gov>
To add a bit more detail to the answer, the reason the transform filter is not scaling all the vectors is because the proper transformation of vectors depends on the type of vector so the filter is being conservative and not transforming most of the vectors at all. To understand this, let's back up and look at different types of vectors that might be in scientific data.
First, there are vectors that deal with spatial movements. Things like displacements, velocities, and accelerations. These have units like m, m/s, and m/s^2, respectively. They clearly should be scaled along with the space like you described.
But other types of vectors shouldn't be scaled. For example, consider electrical current. Current is the amount of electricity that passes through a point per unit of time, and a vector can give the direction of the movement. However, it is not clear that scaling up the model means that more electricity passes through the point. Other "vectors" might just be triples that have no spatial meaning and therefore should also not be scaled. Other spatial vectors have different types of transformations when being scaled. A normal vector, for instance, is transformed by the inverse transpose to maintain its perpendicular-to-surface property. A flux vector, which is related to surface area, would be scaled quadratically.
So the problem is that the transform filter has no way to reliably determine how each vector field should be scaled. VTK data sets have the ability to identify certain fields with special attributes. For example, one field can be attributed as the "vectors" and another can be attributed as the "normals". The transform filter assumes that the vectors are to be scaled linearly and the normals are transformed by the inverse transpose. The rest of the arrays are left alone.
So in summary, in a sense this is in fact a "bug" in that the fields are not being handled correctly. But the filter is doing about as best as it can, so there is no real fix for this bug.
-Ken
From: <Scott>, Walter Scott <wascott at sandia.gov<mailto:wascott at sandia.gov>>
Date: Monday, January 5, 2015 at 12:36 PM
To: Mengda Wu <phdggg at gmail.com<mailto:phdggg at gmail.com>>, "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: Re: [Paraview] [EXTERNAL] Transform filter bug? why some of the data arrays get scaled?
Mengda,
I believe that the transform filter is just scaling the space - i.e., the X, Y and Z data. If you want to scale data arrays, use the Calculator filter.
Alan
From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Mengda Wu
Sent: Saturday, January 03, 2015 11:50 AM
To: paraview at paraview.org<mailto:paraview at paraview.org>
Subject: [EXTERNAL] [Paraview] Transform filter bug? why some of the data arrays get scaled?
Hi All,
I found a possible bug of the paraview's transform filter. If I put just the uniform scaling, e.g. set the scale to 10 10 10. Some of the vector-type data arrays get scaled by 10 but not all. Why is that?
Thanks,
Mengda
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From grothausmann.roman at mh-hannover.de Tue Jan 6 05:58:33 2015
From: grothausmann.roman at mh-hannover.de (Dr. Roman Grothausmann)
Date: Tue, 06 Jan 2015 11:58:33 +0100
Subject: [Paraview] Paraview Programmable Source 3D Text
In-Reply-To: <CAB5Fpx6KVcXFCfL92JxYJhrab8+wR9FuTyp-DfDrSvwVb9KB8g@mail.gmail.com>
References: <5242B6BA.7040306@ipf.tuwien.ac.at> <CADHSJjCRpKk-u_DtL_68wiyMLvo-_UKntez-ir_TMg0bKDS4Zg@mail.gmail.com> <52434C88.4040309@ipf.tuwien.ac.at> <524402D1.1020202@ipf.tuwien.ac.at> <CADHSJjAxhQzWtShM0=GKWGZiAmD-MWVWEOHnhaoLi1cQ_VQ5bw@mail.gmail.com> <54AA908B.3010105@mh-hannover.de>
<CAB5Fpx6KVcXFCfL92JxYJhrab8+wR9FuTyp-DfDrSvwVb9KB8g@mail.gmail.com>
Message-ID: <54ABBFD9.2010502@mh-hannover.de>
Dear Cory,
Following Your suggestion, I tried to modify my current plugin to include a new
representation. However, I'm lost on how to combine the two things together. The
example at the wiki and the one I found from Utkarsh
(http://public.kitware.com/pipermail/paraview/2011-July/022296.html) replace the
Mapper and not the actor. So I'm not sure where to place the
text-plydata-generation in that case. Can You help me to get going with this? My
current attempt is attached.
Many thanks for Your help
Roman
PS: I tried to compile Utkarsh's example but it stops because the
UpdateSuppressor seems to be gone:
/net/home/grothama/vtk/paraview_plugins/Representation/vtkMySpecialRepresentation.cxx:43:53:
error: ?class vtkMySpecialRepresentation? has no member named ?UpdateSuppressor?
Would vtkMySpecialRepresentation need to be derived from vtkPVUpdateSuppressor?
On 05/01/15 14:57, Cory Quammen wrote:
> Hi Roman,
>
> A representation plugin could probably do this. It would just need to
> set its internal actor to an instance of vtkFollower and set the
> camera from the view's renderer, which could be set by overriding the
> AddToView(vtkView* view) method in your custom representation.
>
> I hope that helps,
> Cory
>
> On Mon, Jan 5, 2015 at 8:24 AM, Dr. Roman Grothausmann
> <grothausmann.roman at mh-hannover.de> wrote:
>> Dear Utkarsh,
>>
>>
>> Needing the same thing as Willi, I've created a paraview plugin written in
>> C++ doing basically the same as Your script. Would it be possible to achieve
>> something like vtkFollower does from within a c++ PV plugin such that the
>> text always faces the camera? An other idea would be to use Python in the
>> animation view to rotate the text as the camera orbits. This would be a
>> workaround only for animations, which would suffice for me. Do You thing
>> that should be possible if nothing else works?
>>
>> Many thanks for looking into this.
>> Roman
>>
>> On 26/09/13 19:52, Utkarsh Ayachit wrote:
>>>
>>> Alas, that's not easy to do, if at all possible, with Python source.
>>>
>>>
>>> On Thu, Sep 26, 2013 at 5:48 AM, Willi Karel <wk at ipf.tuwien.ac.at
>>> <mailto:wk at ipf.tuwien.ac.at>> wrote:
>>>
>>> Dear Utkarsh,
>>>
>>> would it be possible to synchronize the transform of the rendered
>>> texts
>>> to the transform of the camera, such that the planes in which the
>>> texts
>>> lie stay normal to the viewing direction?
>>> I'm aware of vtkFollower, but I'm not sure if it is applicable / how
>>> to
>>> make use of it in the context of ParaView / Programmable Source, as it
>>> derives from vtkActor.
>>>
>>> Many thanks!
>>> Willi.
>>>
--
Dr. Roman Grothausmann
Tomographie und Digitale Bildverarbeitung
Tomography and Digital Image Analysis
Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
Medizinische Hochschule Hannover
Carl-Neuberg-Str. 1
D-30625 Hannover
Tel. +49 511 532-9574
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# This exercise demonstrates a filter plugin.
cmake_minimum_required(VERSION 2.6)
FIND_PACKAGE(ParaView REQUIRED)
INCLUDE(${PARAVIEW_USE_FILE})
# Use the PLUGIN macro to create a plugin.
ADD_PARAVIEW_PLUGIN(TextGlyphs3D "1.0"
SERVER_MANAGER_SOURCES TextGlyphs3D.cxx
SERVER_MANAGER_XML TextGlyphs3D.xml)
ADD_PARAVIEW_PLUGIN(Representation "1.0"
SERVER_MANAGER_XML Representation.xml
SERVER_MANAGER_SOURCES
vtkMySpecialPolyDataMapper.cxx
vtkMySpecialRepresentation.cxx)
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From cory.quammen at kitware.com Tue Jan 6 11:13:27 2015
From: cory.quammen at kitware.com (Cory Quammen)
Date: Tue, 6 Jan 2015 11:13:27 -0500
Subject: [Paraview] Some new color mapping features in ParaView
Message-ID: <CAB5Fpx6dRMhqvm=mr=8Cc2swrrV2GHVcF9=hRT5OJzLWiQJAXg@mail.gmail.com>
Hi folks,
I have posted two new blog posts about a couple ways to color data
sets by additional types of data in ParaView 4.3.
New in ParaView: Coloring by string arrays
http://www.kitware.com/blog/home/post/819
New in ParaView: Coloring by field data
http://www.kitware.com/blog/home/post/817
I hope you might find these features useful.
Cheers,
Cory
--
Cory Quammen
R&D Engineer
Kitware, Inc.
From samuelkey at bresnan.net Tue Jan 6 13:07:51 2015
From: samuelkey at bresnan.net (Samuel Key)
Date: Tue, 06 Jan 2015 11:07:51 -0700
Subject: [Paraview] Some new color mapping features in ParaView
In-Reply-To: <CAB5Fpx6dRMhqvm=mr=8Cc2swrrV2GHVcF9=hRT5OJzLWiQJAXg@mail.gmail.com>
References: <CAB5Fpx6dRMhqvm=mr=8Cc2swrrV2GHVcF9=hRT5OJzLWiQJAXg@mail.gmail.com>
Message-ID: <54AC2477.3010905@bresnan.net>
Cory,
"New in ParaView: Coloring by field data
http://www.kitware.com/blog/home/post/817 "
Thanks for this effort and explanation of how to use it! I am familiar
with the ExodusII simulation results database and its 'field' variables.
In my multiple-material simulation models, total internal energy
by-material is a field variable for each material block.
However, once I implemented in my software, the capability for writing
an EnSight Gold simulation results file-set, my efforts to advance to
the ExodusII format have all been for naught. My results simulation
output routinely uses the EnSight-format 'Part' construct to create
by-material blocks that the PV Extract Block filter nicely allows me to
display any-and-all combinations of material Parts.
Is their any possibility of storing and accessing field data via
ParaView's EnSight reader?
Samuel W Key
FMA Development, LLC
1005 39th Ave NE
Great Falls, Montana 59404
On 1/6/2015 9:13 AM, Cory Quammen wrote:
> Hi folks,
>
> I have posted two new blog posts about a couple ways to color data
> sets by additional types of data in ParaView 4.3.
>
> New in ParaView: Coloring by string arrays
> http://www.kitware.com/blog/home/post/819
>
> New in ParaView: Coloring by field data
> http://www.kitware.com/blog/home/post/817
>
> I hope you might find these features useful.
>
> Cheers,
> Cory
>
From wascott at sandia.gov Tue Jan 6 22:12:11 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Wed, 7 Jan 2015 03:12:11 +0000
Subject: [Paraview] Parallel reads in ParaView
Message-ID: <f0413ee391d641659ef5016f63fde6c0@ES05AMSNLNT.srn.sandia.gov>
I have a user that is trying to write a python script that reads in a dataset with a large number of files (say hundreds to thousands of files). The dataset is Exodus. This user wants to read in a large number of these datasets (dozens to hundreds), with each dataset comprised of a different number of individual files than the other datasets. Thus, he doesn't want to read in files like this (example, only 8 files):
z_pinch1exo8 = ExodusIIReader(FileName=['z_pinch1.exo.8.0', 'z_pinch1.exo.8.1', z_pinch1.exo.8.2', 'z_pinch1.exo.8.3', 'z_pinch1.exo.8.4', 'z_pinch1.exo.8.5', 'z_pinch1.exo.8.6', 'z_pinch1.exo.8.7'])
But would rather like this:
z_pinch1exo8 = ExodusIIReader(FileName=['z_pinch1.exo.8.*'])
or
z_pinch1exo8 = ExodusIIReader(FileName=['z_pinch1.exo."totalFileCount".*'])
Is this possible in Python? What is the format?
If the user wants to window into his data, say take the last 4 files, is this possible?
Thanks,
Alan
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From cory.quammen at kitware.com Tue Jan 6 22:17:32 2015
From: cory.quammen at kitware.com (Cory Quammen)
Date: Tue, 6 Jan 2015 22:17:32 -0500
Subject: [Paraview] Paraview Programmable Source 3D Text
In-Reply-To: <54ABBFD9.2010502@mh-hannover.de>
References: <5242B6BA.7040306@ipf.tuwien.ac.at>
<CADHSJjCRpKk-u_DtL_68wiyMLvo-_UKntez-ir_TMg0bKDS4Zg@mail.gmail.com>
<52434C88.4040309@ipf.tuwien.ac.at>
<524402D1.1020202@ipf.tuwien.ac.at>
<CADHSJjAxhQzWtShM0=GKWGZiAmD-MWVWEOHnhaoLi1cQ_VQ5bw@mail.gmail.com>
<54AA908B.3010105@mh-hannover.de>
<CAB5Fpx6KVcXFCfL92JxYJhrab8+wR9FuTyp-DfDrSvwVb9KB8g@mail.gmail.com>
<54ABBFD9.2010502@mh-hannover.de>
Message-ID: <CAB5Fpx53VxRGk1mNQoEyJ1C7okC1=HJQSkBz9UGY2GbJG2nzjA@mail.gmail.com>
Roman,
I think there's a fundamental problem with the approach we've
discussed so far. vtkFollower won't work with the text glyph approach
you are proposing. The problem is that you need to rotate each of the
text glyphs independently to face the camera plane. If you generate a
set of 3D glyphs at each point, using a vtkFollower in the
representation will reorient the entire set of glyphs and not each
glyph independently. Does that make sense?
You might want to take a look at vtkDataLabelRepresentation in
ParaView. It draws cell ID and point ID labels oriented with the
camera plane.
Hope that helps,
Cory
On Tue, Jan 6, 2015 at 5:58 AM, Dr. Roman Grothausmann
<grothausmann.roman at mh-hannover.de> wrote:
> Dear Cory,
>
>
> Following Your suggestion, I tried to modify my current plugin to include a
> new representation. However, I'm lost on how to combine the two things
> together. The example at the wiki and the one I found from Utkarsh
> (http://public.kitware.com/pipermail/paraview/2011-July/022296.html) replace
> the Mapper and not the actor. So I'm not sure where to place the
> text-plydata-generation in that case. Can You help me to get going with
> this? My current attempt is attached.
>
> Many thanks for Your help
> Roman
>
>
> PS: I tried to compile Utkarsh's example but it stops because the
> UpdateSuppressor seems to be gone:
>
> /net/home/grothama/vtk/paraview_plugins/Representation/vtkMySpecialRepresentation.cxx:43:53:
> error: ?class vtkMySpecialRepresentation? has no member named
> ?UpdateSuppressor?
>
> Would vtkMySpecialRepresentation need to be derived from
> vtkPVUpdateSuppressor?
>
>
> On 05/01/15 14:57, Cory Quammen wrote:
>>
>> Hi Roman,
>>
>> A representation plugin could probably do this. It would just need to
>> set its internal actor to an instance of vtkFollower and set the
>> camera from the view's renderer, which could be set by overriding the
>> AddToView(vtkView* view) method in your custom representation.
>>
>> I hope that helps,
>> Cory
>>
>> On Mon, Jan 5, 2015 at 8:24 AM, Dr. Roman Grothausmann
>> <grothausmann.roman at mh-hannover.de> wrote:
>>>
>>> Dear Utkarsh,
>>>
>>>
>>> Needing the same thing as Willi, I've created a paraview plugin written
>>> in
>>> C++ doing basically the same as Your script. Would it be possible to
>>> achieve
>>> something like vtkFollower does from within a c++ PV plugin such that the
>>> text always faces the camera? An other idea would be to use Python in the
>>> animation view to rotate the text as the camera orbits. This would be a
>>> workaround only for animations, which would suffice for me. Do You thing
>>> that should be possible if nothing else works?
>>>
>>> Many thanks for looking into this.
>>> Roman
>>>
>>> On 26/09/13 19:52, Utkarsh Ayachit wrote:
>>>>
>>>>
>>>> Alas, that's not easy to do, if at all possible, with Python source.
>>>>
>>>>
>>>> On Thu, Sep 26, 2013 at 5:48 AM, Willi Karel <wk at ipf.tuwien.ac.at
>>>> <mailto:wk at ipf.tuwien.ac.at>> wrote:
>>>>
>>>> Dear Utkarsh,
>>>>
>>>> would it be possible to synchronize the transform of the rendered
>>>> texts
>>>> to the transform of the camera, such that the planes in which the
>>>> texts
>>>> lie stay normal to the viewing direction?
>>>> I'm aware of vtkFollower, but I'm not sure if it is applicable /
>>>> how
>>>> to
>>>> make use of it in the context of ParaView / Programmable Source, as
>>>> it
>>>> derives from vtkActor.
>>>>
>>>> Many thanks!
>>>> Willi.
>>>>
>
>
> --
> Dr. Roman Grothausmann
>
> Tomographie und Digitale Bildverarbeitung
> Tomography and Digital Image Analysis
>
> Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
> Medizinische Hochschule Hannover
> Carl-Neuberg-Str. 1
> D-30625 Hannover
>
> Tel. +49 511 532-9574
--
Cory Quammen
R&D Engineer
Kitware, Inc.
From grothausmann.roman at mh-hannover.de Wed Jan 7 04:34:21 2015
From: grothausmann.roman at mh-hannover.de (Dr. Roman Grothausmann)
Date: Wed, 07 Jan 2015 10:34:21 +0100
Subject: [Paraview] Paraview Programmable Source 3D Text
In-Reply-To: <CAB5Fpx53VxRGk1mNQoEyJ1C7okC1=HJQSkBz9UGY2GbJG2nzjA@mail.gmail.com>
References: <5242B6BA.7040306@ipf.tuwien.ac.at> <CADHSJjCRpKk-u_DtL_68wiyMLvo-_UKntez-ir_TMg0bKDS4Zg@mail.gmail.com> <52434C88.4040309@ipf.tuwien.ac.at> <524402D1.1020202@ipf.tuwien.ac.at> <CADHSJjAxhQzWtShM0=GKWGZiAmD-MWVWEOHnhaoLi1cQ_VQ5bw@mail.gmail.com> <54AA908B.3010105@mh-hannover.de> <CAB5Fpx6KVcXFCfL92JxYJhrab8+wR9FuTyp-DfDrSvwVb9KB8g@mail.gmail.com> <54ABBFD9.2010502@mh-hannover.de>
<CAB5Fpx53VxRGk1mNQoEyJ1C7okC1=HJQSkBz9UGY2GbJG2nzjA@mail.gmail.com>
Message-ID: <54ACFD9D.5050607@mh-hannover.de>
Dear Cory,
Many thanks for Your reply.
On 07/01/15 04:17, Cory Quammen wrote:
> vtkFollower won't work with the text glyph approach
> you are proposing. The problem is that you need to rotate each of the
> text glyphs independently to face the camera plane. If you generate a
> set of 3D glyphs at each point, using a vtkFollower in the
> representation will reorient the entire set of glyphs and not each
> glyph independently. Does that make sense?
I think this would not be a problem because I would append all labels to a
single vtkPolyData and that would not be translated from the origin, so I'd
think that a rotation applied by the vtkFollower to that object should do the
trick. If I understand the general idea of representation plugins correctly, I
could just choose this kind of camera-follower representation for the appended
vtkVectorText object and the normal representations for other objects.
Let's assume for simplicity that I'd just want a 3D arrow to always point in the
same direction no matter how I rotate the view direction. Would that be possible
with this modified representation approach?
> You might want to take a look at vtkDataLabelRepresentation in
> ParaView. It draws cell ID and point ID labels oriented with the
> camera plane.
I had a look and found an example from Utkarsh here:
http://public.kitware.com/pipermail/paraview/2012-May/024920.html
It works but has the same problem as the selection label tool: It draws the
labels as 2D text such that labels of hidden points (when using an intransparent
surface or volume representation) are still visible in front. For an orbiting
cam animation we need, this effect is very irritating when viewed with many labels.
I also tried to modify vtkDataLabelRepresentation* to use:
this->PointLabelMapper = vtkPolyDataMapper::New();
this->PointLabelActor = vtkFollower::New();
this->PointLabelProperty = vtkVectorText::New();
but it seems this needs many many changes in the code.
Although I'd love to have such functionality for the 3D-view of PV, one other
idea I just had: Is it possible to load a paraview scene within a python script
such that I'd do the creation of the animation there? Would it be possible then
to use vtkVectorText+vtkFollower?
Many thanks for Your help.
Roman
> On Tue, Jan 6, 2015 at 5:58 AM, Dr. Roman Grothausmann
> <grothausmann.roman at mh-hannover.de> wrote:
>> Dear Cory,
>>
>>
>> Following Your suggestion, I tried to modify my current plugin to include a
>> new representation. However, I'm lost on how to combine the two things
>> together. The example at the wiki and the one I found from Utkarsh
>> (http://public.kitware.com/pipermail/paraview/2011-July/022296.html) replace
>> the Mapper and not the actor. So I'm not sure where to place the
>> text-plydata-generation in that case. Can You help me to get going with
>> this? My current attempt is attached.
>>
>> Many thanks for Your help
>> Roman
>>
>>
>> PS: I tried to compile Utkarsh's example but it stops because the
>> UpdateSuppressor seems to be gone:
>>
>> /net/home/grothama/vtk/paraview_plugins/Representation/vtkMySpecialRepresentation.cxx:43:53:
>> error: ?class vtkMySpecialRepresentation? has no member named
>> ?UpdateSuppressor?
>>
>> Would vtkMySpecialRepresentation need to be derived from
>> vtkPVUpdateSuppressor?
>>
>>
>> On 05/01/15 14:57, Cory Quammen wrote:
>>>
>>> Hi Roman,
>>>
>>> A representation plugin could probably do this. It would just need to
>>> set its internal actor to an instance of vtkFollower and set the
>>> camera from the view's renderer, which could be set by overriding the
>>> AddToView(vtkView* view) method in your custom representation.
>>>
>>> I hope that helps,
>>> Cory
>>>
>>> On Mon, Jan 5, 2015 at 8:24 AM, Dr. Roman Grothausmann
>>> <grothausmann.roman at mh-hannover.de> wrote:
>>>>
>>>> Dear Utkarsh,
>>>>
>>>>
>>>> Needing the same thing as Willi, I've created a paraview plugin written
>>>> in
>>>> C++ doing basically the same as Your script. Would it be possible to
>>>> achieve
>>>> something like vtkFollower does from within a c++ PV plugin such that the
>>>> text always faces the camera? An other idea would be to use Python in the
>>>> animation view to rotate the text as the camera orbits. This would be a
>>>> workaround only for animations, which would suffice for me. Do You thing
>>>> that should be possible if nothing else works?
>>>>
>>>> Many thanks for looking into this.
>>>> Roman
>>>>
>>>> On 26/09/13 19:52, Utkarsh Ayachit wrote:
>>>>>
>>>>>
>>>>> Alas, that's not easy to do, if at all possible, with Python source.
>>>>>
>>>>>
>>>>> On Thu, Sep 26, 2013 at 5:48 AM, Willi Karel <wk at ipf.tuwien.ac.at
>>>>> <mailto:wk at ipf.tuwien.ac.at>> wrote:
>>>>>
>>>>> Dear Utkarsh,
>>>>>
>>>>> would it be possible to synchronize the transform of the rendered
>>>>> texts
>>>>> to the transform of the camera, such that the planes in which the
>>>>> texts
>>>>> lie stay normal to the viewing direction?
>>>>> I'm aware of vtkFollower, but I'm not sure if it is applicable /
>>>>> how
>>>>> to
>>>>> make use of it in the context of ParaView / Programmable Source, as
>>>>> it
>>>>> derives from vtkActor.
>>>>>
>>>>> Many thanks!
>>>>> Willi.
>>>>>
>>
>>
>> --
>> Dr. Roman Grothausmann
>>
>> Tomographie und Digitale Bildverarbeitung
>> Tomography and Digital Image Analysis
>>
>> Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
>> Medizinische Hochschule Hannover
>> Carl-Neuberg-Str. 1
>> D-30625 Hannover
>>
>> Tel. +49 511 532-9574
>
>
>
--
Dr. Roman Grothausmann
Tomographie und Digitale Bildverarbeitung
Tomography and Digital Image Analysis
Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
Medizinische Hochschule Hannover
Carl-Neuberg-Str. 1
D-30625 Hannover
Tel. +49 511 532-9574
From stephen.wornom at inria.fr Wed Jan 7 04:47:51 2015
From: stephen.wornom at inria.fr (Stephen Wornom)
Date: Wed, 07 Jan 2015 10:47:51 +0100
Subject: [Paraview] PV 4.1: animations of large data
Message-ID: <54AD00C7.1000107@inria.fr>
I create animation using PV with mpi. I can create 200 frames quickly,
no problem.
The problem is visualizing the frames. What I do currently is to create
a gif
convert *.jpg animation.gif
animate animation.gif
The problem is that the gif file is huge, takes a long time to load the
gif file.
1- Are there other visualization options that will be more rapid? I
would like to animate 1000 frames which is not possible using a mono gif
file.
2- The jpg s are 64-bit, is there a convert option to reduce the options
to 32-bit?
Thanks for your precious advice,
Stephen
p.s.
Some links to my animations are given below.
--
# Tandem cylinders pressure waves
<http://www-sop.inria.fr/members/Stephen.Wornom/animate_tandem_cylinders_sound_waves.html>
# pressure wave explosion when vortex shedding begins (be patient, startup
is slow)
<http://www-sop.inria.fr/members/Stephen.Wornom/animate_tandem_cylinders_pressure-wave_explosion_when_vortex_shedding_starts.html>
# Square cylinder Re= 22400: dynamic vs non-dynamic (patience)
<http://www-sop.inria.fr/members/Stephen.Wornom/animate_square_cylinder_vorticity_dynamic_vs_non-dynamic.html>
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From nicolas.niclausse at inria.fr Wed Jan 7 08:48:50 2015
From: nicolas.niclausse at inria.fr (Nicolas Niclausse)
Date: Wed, 07 Jan 2015 14:48:50 +0100
Subject: [Paraview] [clusters-sophia.users] PV 4.1: animations of large
data
In-Reply-To: <54AD00C7.1000107@inria.fr>
References: <54AD00C7.1000107@inria.fr>
Message-ID: <54AD3942.4020707@inria.fr>
Stephen Wornom a ?crit le 07/01/2015 10:47 :
> I create animation using PV with mpi. I can create 200 frames quickly, no
> problem.
>
> The problem is visualizing the frames. What I do currently is to create a gif
> convert *.jpg animation.gif
> animate animation.gif
You should create directly a video file from paraview. The 4.1 version
installed on nef is able to create directly ogv files.
--
Nicolas NICLAUSSE Service DREAM
INRIA Sophia Antipolis http://www-sop.inria.fr/
2004 route des lucioles - BP 93 Tel: (33/0) 4 92 38 76 93
06902 SOPHIA-ANTIPOLIS cedex (France) Fax: (33/0) 4 92 38 76 02
From andy.bauer at kitware.com Wed Jan 7 09:34:56 2015
From: andy.bauer at kitware.com (Andy Bauer)
Date: Wed, 7 Jan 2015 09:34:56 -0500
Subject: [Paraview] Parallel reads in ParaView
In-Reply-To: <f0413ee391d641659ef5016f63fde6c0@ES05AMSNLNT.srn.sandia.gov>
References: <f0413ee391d641659ef5016f63fde6c0@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <CAMaOp+HTkMXOxAaY3K745718_EAogsBuzEYZmZY1Jz0LgPWSew@mail.gmail.com>
Hi Alan,
I'm thinking it may be easiest to let Python do the heavy lifting on this
to figure out the files to read in. You can use glob from the glob module
and then sort the files. So that would look like:
=======
import glob
files = glob.glob("z_pinch*")
files.sort() # if the order of the files isn't important you can probably
skip this
========
You can use more advanced regex's in the glob() method to get pickier about
the desired files, do a bit of playing around with sort() to get
non-default sorting and then play with the list to get the files you want
from them like the last 4 files.
Cheers,
Andy
On Tue, Jan 6, 2015 at 10:12 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> I have a user that is trying to write a python script that reads in a
> dataset with a large number of files (say hundreds to thousands of files).
> The dataset is Exodus. This user wants to read in a large number of these
> datasets (dozens to hundreds), with each dataset comprised of a different
> number of individual files than the other datasets. Thus, he doesn?t want
> to read in files like this (example, only 8 files):
>
> z_pinch1exo8 = ExodusIIReader(FileName=['z_pinch1.exo.8.0',
> 'z_pinch1.exo.8.1', z_pinch1.exo.8.2', 'z_pinch1.exo.8.3',
> 'z_pinch1.exo.8.4', 'z_pinch1.exo.8.5', 'z_pinch1.exo.8.6',
> 'z_pinch1.exo.8.7'])
>
>
> But would rather like this:
> z_pinch1exo8 = ExodusIIReader(FileName=['z_pinch1.exo.8.*?])
> or
> z_pinch1exo8 = ExodusIIReader(FileName=['z_pinch1.exo.?totalFileCount?.*?])
>
>
> Is this possible in Python? What is the format?
>
> If the user wants to window into his data, say take the last 4 files, is
> this possible?
>
> Thanks,
>
> Alan
>
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
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>
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From stephen.wornom at inria.fr Wed Jan 7 10:54:12 2015
From: stephen.wornom at inria.fr (Stephen Wornom)
Date: Wed, 07 Jan 2015 16:54:12 +0100
Subject: [Paraview] [clusters-sophia.users] PV 4.1: animations of large
data
In-Reply-To: <54AD3942.4020707@inria.fr>
References: <54AD00C7.1000107@inria.fr> <54AD3942.4020707@inria.fr>
Message-ID: <54AD56A4.6000502@inria.fr>
On 01/07/2015 02:48 PM, Nicolas Niclausse wrote:
> Stephen Wornom a ?crit le 07/01/2015 10:47 :
>> I create animation using PV with mpi. I can create 200 frames quickly, no
>> problem.
>>
>> The problem is visualizing the frames. What I do currently is to create a gif
>> convert *.jpg animation.gif
>> animate animation.gif
> You should create directly a video file from paraview. The 4.1 version
> installed on nef is able to create directly ogv files.
Thanks Nicolas. I tried ogv and it is much, much faster than using convert.
Stephen
>
>
>
> Documentation & FAQ: http://www-sop.inria.fr/parallel/
--
# Tandem cylinders pressure waves
<http://www-sop.inria.fr/members/Stephen.Wornom/animate_tandem_cylinders_sound_waves.html>
# pressure wave explosion when vortex shedding begins (be patient, startup
is slow)
<http://www-sop.inria.fr/members/Stephen.Wornom/animate_tandem_cylinders_pressure-wave_explosion_when_vortex_shedding_starts.html>
# Square cylinder Re= 22400: dynamic vs non-dynamic (patience)
<http://www-sop.inria.fr/members/Stephen.Wornom/animate_square_cylinder_vorticity_dynamic_vs_non-dynamic.html>
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From stephen.wornom at inria.fr Wed Jan 7 11:22:45 2015
From: stephen.wornom at inria.fr (Stephen Wornom)
Date: Wed, 07 Jan 2015 17:22:45 +0100
Subject: [Paraview] [clusters-sophia.users] PV 4.1: animations of large
data
In-Reply-To: <54AD56A4.6000502@inria.fr>
References: <54AD00C7.1000107@inria.fr> <54AD3942.4020707@inria.fr>
<54AD56A4.6000502@inria.fr>
Message-ID: <54AD5D55.7040203@inria.fr>
On 01/07/2015 04:54 PM, Stephen Wornom wrote:
> On 01/07/2015 02:48 PM, Nicolas Niclausse wrote:
>> Stephen Wornom a ?crit le 07/01/2015 10:47 :
>>> I create animation using PV with mpi. I can create 200 frames quickly, no
>>> problem.
>>>
>>> The problem is visualizing the frames. What I do currently is to create a gif
>>> convert *.jpg animation.gif
>>> animate animation.gif
>> You should create directly a video file from paraview. The 4.1 version
>> installed on nef is able to create directly ogv files.
> Thanks Nicolas. I tried ogv and it is much, much faster than using
> convert.
How does one add sound in ParaView 4.1? Any suggestions?
Stephen
> Stephen
>>
>>
>> Documentation & FAQ:http://www-sop.inria.fr/parallel/
>
>
> --
> # Tandem cylinders pressure waves
> <http://www-sop.inria.fr/members/Stephen.Wornom/animate_tandem_cylinders_sound_waves.html>
> # pressure wave explosion when vortex shedding begins (be patient,
> startup is slow)
> <http://www-sop.inria.fr/members/Stephen.Wornom/animate_tandem_cylinders_pressure-wave_explosion_when_vortex_shedding_starts.html>
> # Square cylinder Re= 22400: dynamic vs non-dynamic (patience)
> <http://www-sop.inria.fr/members/Stephen.Wornom/animate_square_cylinder_vorticity_dynamic_vs_non-dynamic.html>
--
# Tandem cylinders pressure waves
<http://www-sop.inria.fr/members/Stephen.Wornom/animate_tandem_cylinders_sound_waves.html>
# pressure wave explosion when vortex shedding begins (be patient, startup
is slow)
<http://www-sop.inria.fr/members/Stephen.Wornom/animate_tandem_cylinders_pressure-wave_explosion_when_vortex_shedding_starts.html>
# Square cylinder Re= 22400: dynamic vs non-dynamic (patience)
<http://www-sop.inria.fr/members/Stephen.Wornom/animate_square_cylinder_vorticity_dynamic_vs_non-dynamic.html>
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From kmorel at sandia.gov Wed Jan 7 11:46:08 2015
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Wed, 7 Jan 2015 16:46:08 +0000
Subject: [Paraview] [EXTERNAL] Re: Parallel reads in ParaView
In-Reply-To: <CAMaOp+HTkMXOxAaY3K745718_EAogsBuzEYZmZY1Jz0LgPWSew@mail.gmail.com>
References: <f0413ee391d641659ef5016f63fde6c0@ES05AMSNLNT.srn.sandia.gov>
<CAMaOp+HTkMXOxAaY3K745718_EAogsBuzEYZmZY1Jz0LgPWSew@mail.gmail.com>
Message-ID: <D0D2AFD7.1F626%kmorel@sandia.gov>
Most filters would have to do something like Andy suggests, but the Exodus reader just so happens to have the ability to find all relevant files if you point to the first one (for historical reasons). So using the following should work:
z_pinch1exo8 = ExodusIIReader(FileName='z_pinch1.exo.8.0')
-Ken
From: Andy Bauer <andy.bauer at kitware.com<mailto:andy.bauer at kitware.com>>
Date: Wednesday, January 7, 2015 at 7:34 AM
To: Walter Scott <wascott at sandia.gov<mailto:wascott at sandia.gov>>
Cc: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: [EXTERNAL] Re: [Paraview] Parallel reads in ParaView
Hi Alan,
I'm thinking it may be easiest to let Python do the heavy lifting on this to figure out the files to read in. You can use glob from the glob module and then sort the files. So that would look like:
=======
import glob
files = glob.glob("z_pinch*")
files.sort() # if the order of the files isn't important you can probably skip this
========
You can use more advanced regex's in the glob() method to get pickier about the desired files, do a bit of playing around with sort() to get non-default sorting and then play with the list to get the files you want from them like the last 4 files.
Cheers,
Andy
On Tue, Jan 6, 2015 at 10:12 PM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov>> wrote:
I have a user that is trying to write a python script that reads in a dataset with a large number of files (say hundreds to thousands of files). The dataset is Exodus. This user wants to read in a large number of these datasets (dozens to hundreds), with each dataset comprised of a different number of individual files than the other datasets. Thus, he doesn't want to read in files like this (example, only 8 files):
z_pinch1exo8 = ExodusIIReader(FileName=['z_pinch1.exo.8.0', 'z_pinch1.exo.8.1', z_pinch1.exo.8.2', 'z_pinch1.exo.8.3', 'z_pinch1.exo.8.4', 'z_pinch1.exo.8.5', 'z_pinch1.exo.8.6', 'z_pinch1.exo.8.7'])
But would rather like this:
z_pinch1exo8 = ExodusIIReader(FileName=['z_pinch1.exo.8.*'])
or
z_pinch1exo8 = ExodusIIReader(FileName=['z_pinch1.exo."totalFileCount".*'])
Is this possible in Python? What is the format?
If the user wants to window into his data, say take the last 4 files, is this possible?
Thanks,
Alan
_______________________________________________
Powered by www.kitware.com<http://www.kitware.com>
Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
Search the list archives at: http://markmail.org/search/?q=ParaView
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From wascott at sandia.gov Wed Jan 7 12:33:18 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Wed, 7 Jan 2015 17:33:18 +0000
Subject: [Paraview] [EXTERNAL] Re: Parallel reads in ParaView
In-Reply-To: <D0D2AFD7.1F626%kmorel@sandia.gov>
References: <f0413ee391d641659ef5016f63fde6c0@ES05AMSNLNT.srn.sandia.gov>
<CAMaOp+HTkMXOxAaY3K745718_EAogsBuzEYZmZY1Jz0LgPWSew@mail.gmail.com>
<D0D2AFD7.1F626%kmorel@sandia.gov>
Message-ID: <2b8e308e1e3e4d12a00f82cb2386d90a@ES05AMSNLNT.srn.sandia.gov>
Yep, that did it. Only option I didn't try. I will pass this on to my user.
This is also an issue, since if a user wants to only open file 'z_pinch1.exo.8.0', or 'z_pinch1.exo.8.5' which does happen fairly often, they can't. Any ideas how to get that to work? Maybe we need to rethink how we open all files?
Thanks,
Alan
From: Moreland, Kenneth
Sent: Wednesday, January 07, 2015 9:46 AM
To: Andy Bauer; Scott, W Alan
Cc: paraview at paraview.org
Subject: Re: [EXTERNAL] Re: [Paraview] Parallel reads in ParaView
Most filters would have to do something like Andy suggests, but the Exodus reader just so happens to have the ability to find all relevant files if you point to the first one (for historical reasons). So using the following should work:
z_pinch1exo8 = ExodusIIReader(FileName='z_pinch1.exo.8.0')
-Ken
From: Andy Bauer <andy.bauer at kitware.com<mailto:andy.bauer at kitware.com>>
Date: Wednesday, January 7, 2015 at 7:34 AM
To: Walter Scott <wascott at sandia.gov<mailto:wascott at sandia.gov>>
Cc: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: [EXTERNAL] Re: [Paraview] Parallel reads in ParaView
Hi Alan,
I'm thinking it may be easiest to let Python do the heavy lifting on this to figure out the files to read in. You can use glob from the glob module and then sort the files. So that would look like:
=======
import glob
files = glob.glob("z_pinch*")
files.sort() # if the order of the files isn't important you can probably skip this
========
You can use more advanced regex's in the glob() method to get pickier about the desired files, do a bit of playing around with sort() to get non-default sorting and then play with the list to get the files you want from them like the last 4 files.
Cheers,
Andy
On Tue, Jan 6, 2015 at 10:12 PM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov>> wrote:
I have a user that is trying to write a python script that reads in a dataset with a large number of files (say hundreds to thousands of files). The dataset is Exodus. This user wants to read in a large number of these datasets (dozens to hundreds), with each dataset comprised of a different number of individual files than the other datasets. Thus, he doesn't want to read in files like this (example, only 8 files):
z_pinch1exo8 = ExodusIIReader(FileName=['z_pinch1.exo.8.0', 'z_pinch1.exo.8.1', z_pinch1.exo.8.2', 'z_pinch1.exo.8.3', 'z_pinch1.exo.8.4', 'z_pinch1.exo.8.5', 'z_pinch1.exo.8.6', 'z_pinch1.exo.8.7'])
But would rather like this:
z_pinch1exo8 = ExodusIIReader(FileName=['z_pinch1.exo.8.*'])
or
z_pinch1exo8 = ExodusIIReader(FileName=['z_pinch1.exo."totalFileCount".*'])
Is this possible in Python? What is the format?
If the user wants to window into his data, say take the last 4 files, is this possible?
Thanks,
Alan
_______________________________________________
Powered by www.kitware.com<http://www.kitware.com>
Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
Search the list archives at: http://markmail.org/search/?q=ParaView
Follow this link to subscribe/unsubscribe:
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From kmorel at sandia.gov Wed Jan 7 12:48:47 2015
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Wed, 7 Jan 2015 17:48:47 +0000
Subject: [Paraview] [EXTERNAL] Re: Parallel reads in ParaView
In-Reply-To: <2b8e308e1e3e4d12a00f82cb2386d90a@ES05AMSNLNT.srn.sandia.gov>
References: <f0413ee391d641659ef5016f63fde6c0@ES05AMSNLNT.srn.sandia.gov>
<CAMaOp+HTkMXOxAaY3K745718_EAogsBuzEYZmZY1Jz0LgPWSew@mail.gmail.com>
<D0D2AFD7.1F626%kmorel@sandia.gov>
<2b8e308e1e3e4d12a00f82cb2386d90a@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <D0D2BED2.1F650%kmorel@sandia.gov>
Yeah, I can certainly see that as a problem. We could change the behavior to be more like other modern readers where you have to list all the files, but that would break backward compatibility and some other features (such as restart case files <http://www.paraview.org/Wiki/Restarted_Simulation_Readers#Exodus_Time_Series_Case_Files> and who knows what else).
I don't have a good fix.
-Ken
From: <Scott>, Walter Scott <wascott at sandia.gov<mailto:wascott at sandia.gov>>
Date: Wednesday, January 7, 2015 at 10:33 AM
To: Kenneth Moreland <kmorel at sandia.gov<mailto:kmorel at sandia.gov>>, Andy Bauer <andy.bauer at kitware.com<mailto:andy.bauer at kitware.com>>
Cc: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: RE: [EXTERNAL] Re: [Paraview] Parallel reads in ParaView
Yep, that did it. Only option I didn't try. I will pass this on to my user.
This is also an issue, since if a user wants to only open file 'z_pinch1.exo.8.0', or 'z_pinch1.exo.8.5' which does happen fairly often, they can't. Any ideas how to get that to work? Maybe we need to rethink how we open all files?
Thanks,
Alan
From: Moreland, Kenneth
Sent: Wednesday, January 07, 2015 9:46 AM
To: Andy Bauer; Scott, W Alan
Cc: paraview at paraview.org<mailto:paraview at paraview.org>
Subject: Re: [EXTERNAL] Re: [Paraview] Parallel reads in ParaView
Most filters would have to do something like Andy suggests, but the Exodus reader just so happens to have the ability to find all relevant files if you point to the first one (for historical reasons). So using the following should work:
z_pinch1exo8 = ExodusIIReader(FileName='z_pinch1.exo.8.0')
-Ken
From: Andy Bauer <andy.bauer at kitware.com<mailto:andy.bauer at kitware.com>>
Date: Wednesday, January 7, 2015 at 7:34 AM
To: Walter Scott <wascott at sandia.gov<mailto:wascott at sandia.gov>>
Cc: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: [EXTERNAL] Re: [Paraview] Parallel reads in ParaView
Hi Alan,
I'm thinking it may be easiest to let Python do the heavy lifting on this to figure out the files to read in. You can use glob from the glob module and then sort the files. So that would look like:
=======
import glob
files = glob.glob("z_pinch*")
files.sort() # if the order of the files isn't important you can probably skip this
========
You can use more advanced regex's in the glob() method to get pickier about the desired files, do a bit of playing around with sort() to get non-default sorting and then play with the list to get the files you want from them like the last 4 files.
Cheers,
Andy
On Tue, Jan 6, 2015 at 10:12 PM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov>> wrote:
I have a user that is trying to write a python script that reads in a dataset with a large number of files (say hundreds to thousands of files). The dataset is Exodus. This user wants to read in a large number of these datasets (dozens to hundreds), with each dataset comprised of a different number of individual files than the other datasets. Thus, he doesn't want to read in files like this (example, only 8 files):
z_pinch1exo8 = ExodusIIReader(FileName=['z_pinch1.exo.8.0', 'z_pinch1.exo.8.1', z_pinch1.exo.8.2', 'z_pinch1.exo.8.3', 'z_pinch1.exo.8.4', 'z_pinch1.exo.8.5', 'z_pinch1.exo.8.6', 'z_pinch1.exo.8.7'])
But would rather like this:
z_pinch1exo8 = ExodusIIReader(FileName=['z_pinch1.exo.8.*'])
or
z_pinch1exo8 = ExodusIIReader(FileName=['z_pinch1.exo."totalFileCount".*'])
Is this possible in Python? What is the format?
If the user wants to window into his data, say take the last 4 files, is this possible?
Thanks,
Alan
_______________________________________________
Powered by www.kitware.com<http://www.kitware.com>
Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
Search the list archives at: http://markmail.org/search/?q=ParaView
Follow this link to subscribe/unsubscribe:
http://public.kitware.com/mailman/listinfo/paraview
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From ben.boeckel at kitware.com Wed Jan 7 13:41:06 2015
From: ben.boeckel at kitware.com (Ben Boeckel)
Date: Wed, 7 Jan 2015 13:41:06 -0500
Subject: [Paraview] EnSightReader: Change input file
In-Reply-To: <54953CDA.9070206@tu-braunschweig.de>
References: <54621190.8080107@tu-braunschweig.de>
<CADHSJjAbDumoAfK34Uw6X8sgec7s=9chDKx2+5CzCLRiV5+QEA@mail.gmail.com>
<CADwGrVrr+kaNMqgFn3caTnF1npoa=sk7pnvUzcPws3cO43Kgeg@mail.gmail.com>
<54953CDA.9070206@tu-braunschweig.de>
Message-ID: <20150107184106.GA911@megas.kitwarein.com>
On Sat, Dec 20, 2014 at 10:09:46 +0100, Ian Krukow wrote:
> Then I switched to my desktop PC with Windows 7, where I set up the
> building process. When I run the configuration in CMake, as soon as I
> enable python, I get the error
>
> CMake Error at VTK/CMake/ExternalData.cmake:176 (add_test):
> add_test given test NAME "pvpythonPython-TestAnnotateAttributeData"
> which already exists in this directory.
> Call Stack (most recent call first):
> VTK/CMake/vtkTestingMacros.cmake:431 (ExternalData_add_test)
> CMake/ParaViewTestingMacros.cmake:44 (vtk_add_test_python)
> Applications/ParaView/Testing/Python/CMakeLists.txt:82
> (paraview_add_test_pvbatch)
>
> even without the patch. Can you tell me what to do about it?
The issue was fixed here:
https://github.com/Kitware/ParaView/commit/4d65c0684850b50442f7c1b60fb2ebf284931bcc
--Ben
From ben.boeckel at kitware.com Wed Jan 7 13:43:16 2015
From: ben.boeckel at kitware.com (Ben Boeckel)
Date: Wed, 7 Jan 2015 13:43:16 -0500
Subject: [Paraview] Load text file delimited by tab
In-Reply-To: <CADHSJjAX_fGX9hTk=odeFLY1josop1hGNCOBCpt+=hggiK9adg@mail.gmail.com>
References: <C8921E2F87E8024BBD6C59CB07C0F47D28D4B17A@AAI-EXCH-MBX1.campus.unibe.ch>
<CADHSJjAX_fGX9hTk=odeFLY1josop1hGNCOBCpt+=hggiK9adg@mail.gmail.com>
Message-ID: <20150107184316.GB911@megas.kitwarein.com>
On Tue, Nov 11, 2014 at 13:19:42 -0500, Utkarsh Ayachit wrote:
> Interesting! Alas, no, there isn't a direct way for setting this in
> the UI, currently.
A tab could be pasted into the field, I imagine (works here in other
fields).
--Ben
From utkarsh.ayachit at kitware.com Wed Jan 7 14:46:22 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Wed, 7 Jan 2015 14:46:22 -0500
Subject: [Paraview] Gradient filters
In-Reply-To: <648D2290-FC1B-411F-ACE8-1F9671707C12@sandia.gov>
References: <5a9967f5859d4b1e8e83cac41a703222@ES05AMSNLNT.srn.sandia.gov>
<648D2290-FC1B-411F-ACE8-1F9671707C12@sandia.gov>
Message-ID: <CADHSJjCBHaEfM8DK3-hnHX4NuppH7-ESx+xA7yPSzm0retBuvg@mail.gmail.com>
> Rather than fix this
> specific instance, it might be better to have a smarter output window that
> recognizes when a message is repeated and reports only once with an
> indicator of how many times it was raised. Now that I think about it, it
> would be nice if the output window also cleaned up all messages to hide some
> of the diagnostic information that comes with every message (like file
> location). That would make warnings/errors more helpful in general.
Interesting coincidence: over the Christmas break, as a fun project
for the break, I was thinking of working on refactoring ParaView's
output window to borrow ideas from Chrome's console/output window
which allows for nice formatting as well as grouping of repeated
messages etc. I never got around to actually implementing it, however
:). I just had a discussion with Dan. He'll work on putting up a
design page to collect some of the targeted features.
From nikos.beratlis at gmail.com Wed Jan 7 14:55:03 2015
From: nikos.beratlis at gmail.com (Nikolaos Beratlis)
Date: Wed, 7 Jan 2015 14:55:03 -0500
Subject: [Paraview] Help with memory crash?
Message-ID: <CALdMxnzf+9+X38HWzsvX2-Ytxq+uhDkracVznkmyVQ-UK8tdjg@mail.gmail.com>
I am trying to run a script on a cluster with Paraview in parallel. The
cluster architecture is 16cores and 64GB per node. The script reads in two
XMF files, one contains a grid of 2002x100x1000 points along with one
variable. There is a loop to perform two iterations:
try: paraview.simple
except: from paraview.simple import *
paraview.simple._DisableFirstRenderCameraReset()
RenderView1 = GetRenderView()
RenderView1.Background = [1.0, 1.0, 1.0]
view = GetActiveView()
view.ViewSize = [ 800, 500 ]
RenderView1.CenterAxesVisibility = 0
#RenderView1.OrientationAxesVisibility = 0
#Define variables
wdir =
'/lustre/groups/balarasgrp/nikosb/Research/Simulations/golfball/stationary/S120/Re200000/gridC1/run_wm'
#wdir =
'/Users/nikosb/colone/Research/Simulations/golfball/stationary/S120/Re200000/gridC1/run_wm'
#wdir = '/Users/nikosb/Research/Simulations/SPHERE/Re100/gridC1/run'
Qval = 0.1
cfmin = -0.001
cfmax = 0.005
index = [None]*9999
m = 0
for i in range(0, 9):
for j in range(0, 9):
for k in range(0, 9):
for l in range(0, 9):
index[m] = chr(i+48)+chr(j+48)+chr(k+48)+chr(l+48)
m = m+1
for i in range(1,3):
cf_VP_xmf = XDMFReader(
FileName=wdir+'/VPfield/XDMF/cf_VP'+index[i]+'.xmf' )
cf_VP_xmf.Sets = []
cf_VP_xmf.Grids = ['STL Grid']
cf_VP_xmf.PointArrays = ['Cf']
RenderView1 = GetRenderView()
RenderView1.CenterOfRotation = [6.2286853790283203e-06,
2.5033950805664062e-06, 7.1227550506591797e-06]
DataRepresentation1 = Show()
DataRepresentation1.EdgeColor = [0.0, 0.0, 0.50000762951094835]
DataRepresentation1.SelectionPointFieldDataArrayName = 'Cf'
DataRepresentation1.ColorArrayName = ('POINT_DATA', 'Cf')
DataRepresentation1.ScalarOpacityUnitDistance = 0.033928799990483226
DataRepresentation1.ScaleFactor = 0.099998557567596444
a1_Cf_PVLookupTable = GetLookupTableForArray( "Cf", 1,
RGBPoints=[-0.0099065126851201057, 0.23000000000000001,
0.29899999999999999, 0.754, 0.0097341262735426426, 0.86499999999999999,
0.86499999999999999, 0.86499999999999999, 0.029374765232205391,
0.70599999999999996, 0.016, 0.14999999999999999], VectorMode='Magnitude',
NanColor=[0.25, 0.0, 0.0], ColorSpace='Diverging',
ScalarRangeInitialized=1.0 )
a1_Cf_PiecewiseFunction = CreatePiecewiseFunction(
Points=[-0.0099065126851201057, 0.0, 0.5, 0.0, 0.029374765232205391, 1.0,
0.5, 0.0] )
DataRepresentation1.ScalarOpacityFunction = a1_Cf_PiecewiseFunction
DataRepresentation1.LookupTable = a1_Cf_PVLookupTable
a1_Cf_PVLookupTable.ScalarOpacityFunction = a1_Cf_PiecewiseFunction
a1_Cf_PVLookupTable.RGBPoints = [cfmin, 0.23000000000000001,
0.29899999999999999, 0.754, -0.002, 0.86499999999999999,
0.86499999999999999, 0.86499999999999999, cfmax, 0.70599999999999996,
0.016, 0.14999999999999999]
a1_Cf_PVLookupTable.ScalarOpacityFunction = a1_Cf_PiecewiseFunction
a1_Cf_PVLookupTable.LockScalarRange = 1
RenderView1.CameraPosition = [6.2286853790283203e-06,
2.5033950805664062e-06, 3.3460035306026636]
RenderView1.CameraFocalPoint = [6.2286853790283203e-06,
2.5033950805664062e-06, 7.1227550506591797e-06]
RenderView1.CameraClippingRange = [2.3175641399614015, 4.6486514901655163]
RenderView1.CameraParallelScale = 0.86600759519558368
Contour1 = Contour( PointMergeMethod="Uniform Binning" )
Contour1.PointMergeMethod = "Uniform Binning"
Contour1.ContourBy = ['POINTS', 'Cf']
Contour1.Isosurfaces = [0.0097341262735426426]
DataRepresentation2 = Show()
DataRepresentation2.ColorArrayName = ('POINT_DATA', '')
DataRepresentation2.ScaleFactor = 0.099971860647201538
DataRepresentation2.SelectionPointFieldDataArrayName = 'Cf'
DataRepresentation2.EdgeColor = [0.0, 0.0, 0.50000762951094835]
DataRepresentation2.Representation = 'Wireframe'
DataRepresentation2.AmbientColor = [0.0, 0.0, 0.0]
DataRepresentation1.Visibility = 0
RenderView1.CameraClippingRange = [2.7470738944403328, 4.2397684828477349]
DataRepresentation1.Visibility = 1
RenderView1.CameraClippingRange = [2.3175641399614015, 4.6486514901655163]
Q_VP_xmf = XDMFReader( FileName=wdir+'/VPfield/XDMF/Q_VP'+index[i]+'.xmf'
)
Contour1.Isosurfaces = [0.0]
Q_VP_xmf.Sets = []
Q_VP_xmf.Grids = ['Eulerian Grid']
Q_VP_xmf.PointArrays = ['Q']
DataRepresentation3 = Show()
DataRepresentation3.EdgeColor = [0.0, 0.0, 0.50000762951094835]
DataRepresentation3.SelectionPointFieldDataArrayName = 'Q'
DataRepresentation3.ScalarOpacityUnitDistance = 0.0045778956118952439
DataRepresentation3.Representation = 'Outline'
DataRepresentation3.ScaleFactor = 0.25585924386978148
RenderView1.CameraClippingRange = [0.30866115510384229,
6.1311800002592065]
Contour2 = Contour( PointMergeMethod="Uniform Binning" )
Contour2.PointMergeMethod = "Uniform Binning"
Contour2.ContourBy = ['POINTS', 'Q']
Contour2.Isosurfaces = [-348374.28125]
DataRepresentation4 = Show()
DataRepresentation4.ScaleFactor = 0.1348903000354767
DataRepresentation4.SelectionPointFieldDataArrayName = 'Normals'
DataRepresentation4.EdgeColor = [0.0, 0.0, 0.50000762951094835]
Contour2.Isosurfaces = [0.5]
DataRepresentation3.Visibility = 0
RenderView1.CameraClippingRange = [0.46635874330917981,
5.5760844897764175]
RenderView1.CameraViewUp = [-1.0, 0.0, 0.0]
RenderView1.CameraPosition = [-5.0, 0.0, 5.0]
RenderView1.CameraClippingRange = [3.0180305778980254, 7.5069525367021557]
RenderView1.CameraFocalPoint = [0.0, 0.0, 5.0]
RenderView1.CameraParallelScale = 1.565457167140391
RenderView1.CenterOfRotation = [0.0, 0.0, 0.0]
RenderView1.CameraFocalPoint = [0.0, 0.0, 0.5]
RenderView1.CameraClippingRange = [0.86197012554183883,
4.2263653610655147]
RenderView1.CameraPosition = [0.0, -2.5, 0.0]
WriteImage(wdir+'/POSTPRO/IMAGES/Q_cf_VP'+index[i]+'.jpg')
Delete(DataRepresentation4)
Delete(Contour2)
Delete(DataRepresentation3)
Delete(Q_VP_xmf)
Delete(DataRepresentation2)
Delete(Contour1)
Delete(DataRepresentation1)
Delete(cf_VP_xmf)
The script was created by running an interactive Paraview session and
recording the commands. I then modified it slightly to add the loop and
some variables.
I have been able to run the script successfully on 1,2,16 and 32 cores
successfully and it loops twice. However when I try to run on 64 cores I
get the following error message:
[node116:58372] 63 more processes have sent help message
help-mpi-common-cuda.txt / dlopen failed
[node116:58372] Set MCA parameter "orte_base_help_aggregate" to 0 to see
all help / error messages
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
[node125:37180] *** Process received signal ***
[node125:37180] Signal: Aborted (6)
[node125:37180] Signal code: (-6)
[node125:37180] [ 0] /lib64/libpthread.so.0(+0xf710) [0x2aaab28f3710]
[node125:37180] [ 1] /lib64/libc.so.6(gsignal+0x35) [0x2aaab479f625]
[node125:37180] [ 2] /lib64/libc.so.6(abort+0x175) [0x2aaab47a0e05]
[node125:37180] [ 3]
/usr/lib64/libstdc++.so.6(_ZN9__gnu_cxx27__verbose_terminate_handlerEv+0x12d)
[0x2aaab408aa7d]
[node125:37180] [ 4] /usr/lib64/libstdc++.so.6(+0xbcbd6) [0x2aaab4088bd6]
[node125:37180] [ 5] /usr/lib64/libstdc++.so.6(+0xbcc03) [0x2aaab4088c03]
[node125:37180] [ 6] /usr/lib64/libstdc++.so.6(+0xbcd22) [0x2aaab4088d22]
[node125:37180] [ 7] /usr/lib64/libstdc++.so.6(_Znwm+0x7d) [0x2aaab408911d]
[node125:37180] [ 8] /usr/lib64/libstdc++.so.6(_Znam+0x9) [0x2aaab40891d9]
[node125:37180] [ 9]
/c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData10ReadPointsEP12XdmfGeometryPiS2_+0x3a6)
[0x2aaab716310c]
[node125:37180] [10]
/c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData21RequestStructuredGridEP8XdmfGrid+0xfb)
[0x2aaab716292f]
[node125:37180] [11]
/c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData15ReadUniformDataEP8XdmfGrid+0x14c)
[0x2aaab71614ce]
[node125:37180] [12]
/c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData8ReadDataEP8XdmfGrid+0xd1)
[0x2aaab7160c91]
[node125:37180] [13]
/c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData8ReadDataEv+0x4f)
[0x2aaab7160a0f]
[node125:37180] [14]
/c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN13vtkXdmfReader11RequestDataEP14vtkInformationPP20vtkInformationVectorS3_+0x31c)
[0x2aaab716daf0]
[node125:37180] [15]
/c1/apps/paraview/4.1.0/lib/libvtkIOLegacy-pv4.1.so.1(_ZN13vtkDataReader14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x62)
[0x2aaab0b3b9be]
[node125:37180] [16]
/c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN13vtkXdmfReader14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x76)
[0x2aaab716c702]
[node125:37180] [17]
/c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN12vtkExecutive13CallAlgorithmEP14vtkInformationiPP20vtkInformationVectorS3_+0x8d)
[0x2aaab10c63d1]
[node125:37180] [18]
/c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline11ExecuteDataEP14vtkInformationPP20vtkInformationVectorS3_+0x76)
[0x2aaab10c0b1c]
[node125:37180] [19]
/c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN24vtkCompositeDataPipeline11ExecuteDataEP14vtkInformationPP20vtkInformationVectorS3_+0x468)
[0x2aaab10b9950]
[node125:37180] [20]
/c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x522)
[0x2aaab10c0248]
[node125:37180] [21]
/c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0xa6c)
[0x2aaab10e5ace]
[node125:37180] [22]
/c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN24vtkCompositeDataPipeline15ForwardUpstreamEP14vtkInformation+0x2d6)
[0x2aaab10bbb6e]
[node125:37180] [23]
/c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x48a)
[0x2aaab10c01b0]
[node125:37180] [24]
/c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0xa6c)
[0x2aaab10e5ace]
[node125:37180] [25]
/c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline10UpdateDataEi+0x2fb)
[0x2aaab10c0965]
[node125:37180] [26]
/c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline6UpdateEi+0xf8)
[0x2aaab10e5d3e]
[node125:37180] [27]
/c1/apps/paraview/4.1.0/lib/libvtkPVServerImplementationCore-pv4.1.so.1(_ZN16vtkSISourceProxy14UpdatePipelineEidb+0x196)
[0x2aaaac77ef72]
[node125:37180] [28]
/c1/apps/paraview/4.1.0/lib/libvtkPVServerManagerApplication-pv4.1.so.1(_Z23vtkSISourceProxyCommandP26vtkClientServerInterpreterP13vtkObjectBasePKcRK21vtkClientServerStreamRS5_Pv+0x6ee)
[0x2aaaab7f27bd]
[node125:37180] [29]
/c1/apps/paraview/4.1.0/lib/libvtkClientServer-pv4.1.so.1(_ZN26vtkClientServerInterpreter19CallCommandFunctionEPKcP13vtkObjectBaseS1_RK21vtkClientServerStreamRS4_+0x343)
[0x2aaaafb57aa5]
[node125:37180] *** End of error message ***
I am afraid there is an issue with memory leakage or improper memory
allocation and deallocation. At this point I do not know how to proceed to
debug it. Is there an obvious problem in in the script and the way datasets
are deallocated at the end of each iteration?
Regards,
Nikos
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From wascott at sandia.gov Wed Jan 7 15:34:58 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Wed, 7 Jan 2015 20:34:58 +0000
Subject: [Paraview] [EXTERNAL] Re: Trace recorder missing color preset
changes
In-Reply-To: <e2f9662b0b2e44aca2d6db9c631a8b84@ES05AMSNLNT.srn.sandia.gov>
References: <d13e0c0f5d344176a00b484f04c2378b@ES05AMSNLNT.srn.sandia.gov>
<CADHSJjCsQWfXwTfdVcW0A_CyQWMkW+KSAsbQx6=a4eqKzBEMJQ@mail.gmail.com>
<e2f9662b0b2e44aca2d6db9c631a8b84@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <75f17d40903d493b97ac20c7b18aa283@ES05AMSNLNT.srn.sandia.gov>
Ping?
From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Scott, W Alan
Sent: Tuesday, December 23, 2014 10:54 AM
To: Utkarsh Ayachit
Cc: Mauldin, Jeffrey A.; paraview at paraview.org
Subject: Re: [Paraview] [EXTERNAL] Re: Trace recorder missing color preset changes
Correct, the user has a specific XML file / block of code he wants to load. He is working on a car engine, with a few hundred blocks. He is coloring the car engine by material type ? aluminum, steel, rubber, copper, etc.
Alan
From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
Sent: Tuesday, December 23, 2014 8:35 AM
To: Scott, W Alan
Cc: paraview at paraview.org<mailto:paraview at paraview.org>; Mauldin, Jeffrey A.
Subject: [EXTERNAL] Re: [Paraview] Trace recorder missing color preset changes
Alan,
What does your user want to do exactly? Does he have a color XML that he wants to load?
On Mon, Dec 22, 2014 at 9:38 PM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov>> wrote:
There is an issue with the trace recorder missing color preset changes. I wrote up a bug here: http://www.paraview.org/Bug/view.php?id=15116. However, I need the python for a user so that he can manually edit the trace script and change color presets. Does anyone either know the python I need, or where to find it?
Thanks,
Alan
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From e.a.hereth at gmail.com Wed Jan 7 16:03:56 2015
From: e.a.hereth at gmail.com (Ethan Hereth)
Date: Wed, 7 Jan 2015 16:03:56 -0500
Subject: [Paraview] Relative frequencies in Histogram plots
Message-ID: <CACoCd8dask8qNs16Tift=DX+Vh9dVhwXsxxYfXjK_2Lx2LVLmg@mail.gmail.com>
Good afternoon and happy new year!
I have a colleague who would like to be able to plot the relative frequency
of the histogram data instead of absolute bin count. I.e. instead of having
the left axis say there are 100 things in bin one, he'd like for it to say
that 5% of the things are in bin one.
Is this possible?
Thank you!
--
*Ethan Alan Hereth*
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From nikos.beratlis at gmail.com Wed Jan 7 21:17:22 2015
From: nikos.beratlis at gmail.com (Nikolaos Beratlis)
Date: Wed, 7 Jan 2015 21:17:22 -0500
Subject: [Paraview] Help with memory crash?
In-Reply-To: <CALdMxnzf+9+X38HWzsvX2-Ytxq+uhDkracVznkmyVQ-UK8tdjg@mail.gmail.com>
References: <CALdMxnzf+9+X38HWzsvX2-Ytxq+uhDkracVznkmyVQ-UK8tdjg@mail.gmail.com>
Message-ID: <CALdMxnzgu7mQxrrE1Tr7O7MHpuJmyqXn8t3a=gmODv1BuPbFhg@mail.gmail.com>
So I did some more tests by running the script interactively. I used a
smaller grid first, 2002 x 20 x 1000 points and ran it only for 1
iteration. When Paraview loaded the memory usage on the server was 1.04GB.
After doing one iteration the memory usage spiked to 10.42GB and remained
like that when the script finished. What I found out is the Delete
statements make no difference at all, with or without them the memory usage
remained 10.42GB. Performing more iterations in the script actually worsens
this problem, after 4 iterations the memory used increased to 14.32GB. With
a larger grid of 2002 x 100 x 1000 points the memory after one iteration
increased from 10.42GB before the script to 45.25GB after the script. How
can I properly delete all datasets and clear the memory in Paraview?
On Wed, Jan 7, 2015 at 2:55 PM, Nikolaos Beratlis <nikos.beratlis at gmail.com>
wrote:
> I am trying to run a script on a cluster with Paraview in parallel. The
> cluster architecture is 16cores and 64GB per node. The script reads in two
> XMF files, one contains a grid of 2002x100x1000 points along with one
> variable. There is a loop to perform two iterations:
>
> try: paraview.simple
> except: from paraview.simple import *
> paraview.simple._DisableFirstRenderCameraReset()
>
> RenderView1 = GetRenderView()
> RenderView1.Background = [1.0, 1.0, 1.0]
> view = GetActiveView()
> view.ViewSize = [ 800, 500 ]
>
> RenderView1.CenterAxesVisibility = 0
> #RenderView1.OrientationAxesVisibility = 0
>
> #Define variables
> wdir =
> '/lustre/groups/balarasgrp/nikosb/Research/Simulations/golfball/stationary/S120/Re200000/gridC1/run_wm'
> #wdir =
> '/Users/nikosb/colone/Research/Simulations/golfball/stationary/S120/Re200000/gridC1/run_wm'
> #wdir = '/Users/nikosb/Research/Simulations/SPHERE/Re100/gridC1/run'
> Qval = 0.1
> cfmin = -0.001
> cfmax = 0.005
>
> index = [None]*9999
>
> m = 0
> for i in range(0, 9):
> for j in range(0, 9):
> for k in range(0, 9):
> for l in range(0, 9):
> index[m] = chr(i+48)+chr(j+48)+chr(k+48)+chr(l+48)
> m = m+1
>
>
> for i in range(1,3):
>
> cf_VP_xmf = XDMFReader(
> FileName=wdir+'/VPfield/XDMF/cf_VP'+index[i]+'.xmf' )
>
> cf_VP_xmf.Sets = []
> cf_VP_xmf.Grids = ['STL Grid']
> cf_VP_xmf.PointArrays = ['Cf']
>
> RenderView1 = GetRenderView()
> RenderView1.CenterOfRotation = [6.2286853790283203e-06,
> 2.5033950805664062e-06, 7.1227550506591797e-06]
>
> DataRepresentation1 = Show()
> DataRepresentation1.EdgeColor = [0.0, 0.0, 0.50000762951094835]
> DataRepresentation1.SelectionPointFieldDataArrayName = 'Cf'
> DataRepresentation1.ColorArrayName = ('POINT_DATA', 'Cf')
> DataRepresentation1.ScalarOpacityUnitDistance = 0.033928799990483226
> DataRepresentation1.ScaleFactor = 0.099998557567596444
>
> a1_Cf_PVLookupTable = GetLookupTableForArray( "Cf", 1,
> RGBPoints=[-0.0099065126851201057, 0.23000000000000001,
> 0.29899999999999999, 0.754, 0.0097341262735426426, 0.86499999999999999,
> 0.86499999999999999, 0.86499999999999999, 0.029374765232205391,
> 0.70599999999999996, 0.016, 0.14999999999999999], VectorMode='Magnitude',
> NanColor=[0.25, 0.0, 0.0], ColorSpace='Diverging',
> ScalarRangeInitialized=1.0 )
> a1_Cf_PiecewiseFunction = CreatePiecewiseFunction(
> Points=[-0.0099065126851201057, 0.0, 0.5, 0.0, 0.029374765232205391, 1.0,
> 0.5, 0.0] )
>
> DataRepresentation1.ScalarOpacityFunction = a1_Cf_PiecewiseFunction
> DataRepresentation1.LookupTable = a1_Cf_PVLookupTable
>
> a1_Cf_PVLookupTable.ScalarOpacityFunction = a1_Cf_PiecewiseFunction
>
> a1_Cf_PVLookupTable.RGBPoints = [cfmin, 0.23000000000000001,
> 0.29899999999999999, 0.754, -0.002, 0.86499999999999999,
> 0.86499999999999999, 0.86499999999999999, cfmax, 0.70599999999999996,
> 0.016, 0.14999999999999999]
> a1_Cf_PVLookupTable.ScalarOpacityFunction = a1_Cf_PiecewiseFunction
> a1_Cf_PVLookupTable.LockScalarRange = 1
>
> RenderView1.CameraPosition = [6.2286853790283203e-06,
> 2.5033950805664062e-06, 3.3460035306026636]
> RenderView1.CameraFocalPoint = [6.2286853790283203e-06,
> 2.5033950805664062e-06, 7.1227550506591797e-06]
> RenderView1.CameraClippingRange = [2.3175641399614015,
> 4.6486514901655163]
> RenderView1.CameraParallelScale = 0.86600759519558368
>
> Contour1 = Contour( PointMergeMethod="Uniform Binning" )
>
> Contour1.PointMergeMethod = "Uniform Binning"
> Contour1.ContourBy = ['POINTS', 'Cf']
> Contour1.Isosurfaces = [0.0097341262735426426]
>
> DataRepresentation2 = Show()
> DataRepresentation2.ColorArrayName = ('POINT_DATA', '')
> DataRepresentation2.ScaleFactor = 0.099971860647201538
> DataRepresentation2.SelectionPointFieldDataArrayName = 'Cf'
> DataRepresentation2.EdgeColor = [0.0, 0.0, 0.50000762951094835]
>
> DataRepresentation2.Representation = 'Wireframe'
> DataRepresentation2.AmbientColor = [0.0, 0.0, 0.0]
>
> DataRepresentation1.Visibility = 0
>
> RenderView1.CameraClippingRange = [2.7470738944403328,
> 4.2397684828477349]
>
> DataRepresentation1.Visibility = 1
>
> RenderView1.CameraClippingRange = [2.3175641399614015,
> 4.6486514901655163]
>
> Q_VP_xmf = XDMFReader(
> FileName=wdir+'/VPfield/XDMF/Q_VP'+index[i]+'.xmf' )
>
> Contour1.Isosurfaces = [0.0]
>
> Q_VP_xmf.Sets = []
> Q_VP_xmf.Grids = ['Eulerian Grid']
> Q_VP_xmf.PointArrays = ['Q']
>
> DataRepresentation3 = Show()
> DataRepresentation3.EdgeColor = [0.0, 0.0, 0.50000762951094835]
> DataRepresentation3.SelectionPointFieldDataArrayName = 'Q'
> DataRepresentation3.ScalarOpacityUnitDistance = 0.0045778956118952439
> DataRepresentation3.Representation = 'Outline'
> DataRepresentation3.ScaleFactor = 0.25585924386978148
>
> RenderView1.CameraClippingRange = [0.30866115510384229,
> 6.1311800002592065]
>
> Contour2 = Contour( PointMergeMethod="Uniform Binning" )
>
> Contour2.PointMergeMethod = "Uniform Binning"
> Contour2.ContourBy = ['POINTS', 'Q']
> Contour2.Isosurfaces = [-348374.28125]
>
> DataRepresentation4 = Show()
> DataRepresentation4.ScaleFactor = 0.1348903000354767
> DataRepresentation4.SelectionPointFieldDataArrayName = 'Normals'
> DataRepresentation4.EdgeColor = [0.0, 0.0, 0.50000762951094835]
>
> Contour2.Isosurfaces = [0.5]
>
> DataRepresentation3.Visibility = 0
>
> RenderView1.CameraClippingRange = [0.46635874330917981,
> 5.5760844897764175]
>
> RenderView1.CameraViewUp = [-1.0, 0.0, 0.0]
> RenderView1.CameraPosition = [-5.0, 0.0, 5.0]
> RenderView1.CameraClippingRange = [3.0180305778980254,
> 7.5069525367021557]
> RenderView1.CameraFocalPoint = [0.0, 0.0, 5.0]
> RenderView1.CameraParallelScale = 1.565457167140391
> RenderView1.CenterOfRotation = [0.0, 0.0, 0.0]
>
> RenderView1.CameraFocalPoint = [0.0, 0.0, 0.5]
> RenderView1.CameraClippingRange = [0.86197012554183883,
> 4.2263653610655147]
> RenderView1.CameraPosition = [0.0, -2.5, 0.0]
>
> WriteImage(wdir+'/POSTPRO/IMAGES/Q_cf_VP'+index[i]+'.jpg')
>
> Delete(DataRepresentation4)
> Delete(Contour2)
> Delete(DataRepresentation3)
> Delete(Q_VP_xmf)
>
> Delete(DataRepresentation2)
> Delete(Contour1)
> Delete(DataRepresentation1)
> Delete(cf_VP_xmf)
>
> The script was created by running an interactive Paraview session and
> recording the commands. I then modified it slightly to add the loop and
> some variables.
>
> I have been able to run the script successfully on 1,2,16 and 32 cores
> successfully and it loops twice. However when I try to run on 64 cores I
> get the following error message:
>
> [node116:58372] 63 more processes have sent help message
> help-mpi-common-cuda.txt / dlopen failed
> [node116:58372] Set MCA parameter "orte_base_help_aggregate" to 0 to see
> all help / error messages
> terminate called after throwing an instance of 'std::bad_alloc'
> what(): std::bad_alloc
> [node125:37180] *** Process received signal ***
> [node125:37180] Signal: Aborted (6)
> [node125:37180] Signal code: (-6)
> [node125:37180] [ 0] /lib64/libpthread.so.0(+0xf710) [0x2aaab28f3710]
> [node125:37180] [ 1] /lib64/libc.so.6(gsignal+0x35) [0x2aaab479f625]
> [node125:37180] [ 2] /lib64/libc.so.6(abort+0x175) [0x2aaab47a0e05]
> [node125:37180] [ 3]
> /usr/lib64/libstdc++.so.6(_ZN9__gnu_cxx27__verbose_terminate_handlerEv+0x12d)
> [0x2aaab408aa7d]
> [node125:37180] [ 4] /usr/lib64/libstdc++.so.6(+0xbcbd6) [0x2aaab4088bd6]
> [node125:37180] [ 5] /usr/lib64/libstdc++.so.6(+0xbcc03) [0x2aaab4088c03]
> [node125:37180] [ 6] /usr/lib64/libstdc++.so.6(+0xbcd22) [0x2aaab4088d22]
> [node125:37180] [ 7] /usr/lib64/libstdc++.so.6(_Znwm+0x7d) [0x2aaab408911d]
> [node125:37180] [ 8] /usr/lib64/libstdc++.so.6(_Znam+0x9) [0x2aaab40891d9]
> [node125:37180] [ 9]
> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData10ReadPointsEP12XdmfGeometryPiS2_+0x3a6)
> [0x2aaab716310c]
> [node125:37180] [10]
> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData21RequestStructuredGridEP8XdmfGrid+0xfb)
> [0x2aaab716292f]
> [node125:37180] [11]
> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData15ReadUniformDataEP8XdmfGrid+0x14c)
> [0x2aaab71614ce]
> [node125:37180] [12]
> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData8ReadDataEP8XdmfGrid+0xd1)
> [0x2aaab7160c91]
> [node125:37180] [13]
> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData8ReadDataEv+0x4f)
> [0x2aaab7160a0f]
> [node125:37180] [14]
> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN13vtkXdmfReader11RequestDataEP14vtkInformationPP20vtkInformationVectorS3_+0x31c)
> [0x2aaab716daf0]
> [node125:37180] [15]
> /c1/apps/paraview/4.1.0/lib/libvtkIOLegacy-pv4.1.so.1(_ZN13vtkDataReader14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x62)
> [0x2aaab0b3b9be]
> [node125:37180] [16]
> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN13vtkXdmfReader14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x76)
> [0x2aaab716c702]
> [node125:37180] [17]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN12vtkExecutive13CallAlgorithmEP14vtkInformationiPP20vtkInformationVectorS3_+0x8d)
> [0x2aaab10c63d1]
> [node125:37180] [18]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline11ExecuteDataEP14vtkInformationPP20vtkInformationVectorS3_+0x76)
> [0x2aaab10c0b1c]
> [node125:37180] [19]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN24vtkCompositeDataPipeline11ExecuteDataEP14vtkInformationPP20vtkInformationVectorS3_+0x468)
> [0x2aaab10b9950]
> [node125:37180] [20]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x522)
> [0x2aaab10c0248]
> [node125:37180] [21]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0xa6c)
> [0x2aaab10e5ace]
> [node125:37180] [22]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN24vtkCompositeDataPipeline15ForwardUpstreamEP14vtkInformation+0x2d6)
> [0x2aaab10bbb6e]
> [node125:37180] [23]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x48a)
> [0x2aaab10c01b0]
> [node125:37180] [24]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0xa6c)
> [0x2aaab10e5ace]
> [node125:37180] [25]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline10UpdateDataEi+0x2fb)
> [0x2aaab10c0965]
> [node125:37180] [26]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline6UpdateEi+0xf8)
> [0x2aaab10e5d3e]
> [node125:37180] [27]
> /c1/apps/paraview/4.1.0/lib/libvtkPVServerImplementationCore-pv4.1.so.1(_ZN16vtkSISourceProxy14UpdatePipelineEidb+0x196)
> [0x2aaaac77ef72]
> [node125:37180] [28]
> /c1/apps/paraview/4.1.0/lib/libvtkPVServerManagerApplication-pv4.1.so.1(_Z23vtkSISourceProxyCommandP26vtkClientServerInterpreterP13vtkObjectBasePKcRK21vtkClientServerStreamRS5_Pv+0x6ee)
> [0x2aaaab7f27bd]
> [node125:37180] [29]
> /c1/apps/paraview/4.1.0/lib/libvtkClientServer-pv4.1.so.1(_ZN26vtkClientServerInterpreter19CallCommandFunctionEPKcP13vtkObjectBaseS1_RK21vtkClientServerStreamRS4_+0x343)
> [0x2aaaafb57aa5]
> [node125:37180] *** End of error message ***
>
> I am afraid there is an issue with memory leakage or improper memory
> allocation and deallocation. At this point I do not know how to proceed to
> debug it. Is there an obvious problem in in the script and the way datasets
> are deallocated at the end of each iteration?
>
> Regards,
>
> Nikos
>
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From nikos.beratlis at gmail.com Thu Jan 8 12:57:14 2015
From: nikos.beratlis at gmail.com (Nikolaos Beratlis)
Date: Thu, 8 Jan 2015 12:57:14 -0500
Subject: [Paraview] Help with memory crash?
In-Reply-To: <CALdMxnzgu7mQxrrE1Tr7O7MHpuJmyqXn8t3a=gmODv1BuPbFhg@mail.gmail.com>
References: <CALdMxnzf+9+X38HWzsvX2-Ytxq+uhDkracVznkmyVQ-UK8tdjg@mail.gmail.com>
<CALdMxnzgu7mQxrrE1Tr7O7MHpuJmyqXn8t3a=gmODv1BuPbFhg@mail.gmail.com>
Message-ID: <CALdMxnyj7Wf2e2YBoZ_X1Dm1ugwe-V_RZ+J3vGU6FexE5FjP_g@mail.gmail.com>
After reading about memory leaks I modified the script at the end by adding
"del" after "Delete":
Delete(DataRepresentation4)
del DataRepresentation4
Delete(Contour2)
del Contour2
Delete(DataRepresentation3)
del DataRepresentation3
Delete(Q_VP_xmf)
del Q_VP_xmf
Delete(DataRepresentation2)
del DataRepresentation2
Delete(Contour1)
del Contour1
Delete(DataRepresentation1)
del DataRepresentation1
Delete(cf_VP_xmf)
del cf_VP_xmf
That should fully delete the objects from the memory and it helped a little
but I still have memory leaks. Before the script memory usage in the Memory
Inspector is 1.4Gb and after one iteration it increases to 4Gb, compared to
10Gb without the del statements. After 4 iterations the memory usage
increases to 8Gb. Any ideas on how to track and eliminate completely the
memory leaks? I am forgetting to delete an object from the script?
On Wed, Jan 7, 2015 at 9:17 PM, Nikolaos Beratlis <nikos.beratlis at gmail.com>
wrote:
> So I did some more tests by running the script interactively. I used a
> smaller grid first, 2002 x 20 x 1000 points and ran it only for 1
> iteration. When Paraview loaded the memory usage on the server was 1.04GB.
> After doing one iteration the memory usage spiked to 10.42GB and remained
> like that when the script finished. What I found out is the Delete
> statements make no difference at all, with or without them the memory usage
> remained 10.42GB. Performing more iterations in the script actually worsens
> this problem, after 4 iterations the memory used increased to 14.32GB. With
> a larger grid of 2002 x 100 x 1000 points the memory after one iteration
> increased from 10.42GB before the script to 45.25GB after the script. How
> can I properly delete all datasets and clear the memory in Paraview?
>
>
>
> On Wed, Jan 7, 2015 at 2:55 PM, Nikolaos Beratlis <
> nikos.beratlis at gmail.com> wrote:
>
>> I am trying to run a script on a cluster with Paraview in parallel. The
>> cluster architecture is 16cores and 64GB per node. The script reads in two
>> XMF files, one contains a grid of 2002x100x1000 points along with one
>> variable. There is a loop to perform two iterations:
>>
>> try: paraview.simple
>> except: from paraview.simple import *
>> paraview.simple._DisableFirstRenderCameraReset()
>>
>> RenderView1 = GetRenderView()
>> RenderView1.Background = [1.0, 1.0, 1.0]
>> view = GetActiveView()
>> view.ViewSize = [ 800, 500 ]
>>
>> RenderView1.CenterAxesVisibility = 0
>> #RenderView1.OrientationAxesVisibility = 0
>>
>> #Define variables
>> wdir =
>> '/lustre/groups/balarasgrp/nikosb/Research/Simulations/golfball/stationary/S120/Re200000/gridC1/run_wm'
>> #wdir =
>> '/Users/nikosb/colone/Research/Simulations/golfball/stationary/S120/Re200000/gridC1/run_wm'
>> #wdir = '/Users/nikosb/Research/Simulations/SPHERE/Re100/gridC1/run'
>> Qval = 0.1
>> cfmin = -0.001
>> cfmax = 0.005
>>
>> index = [None]*9999
>>
>> m = 0
>> for i in range(0, 9):
>> for j in range(0, 9):
>> for k in range(0, 9):
>> for l in range(0, 9):
>> index[m] = chr(i+48)+chr(j+48)+chr(k+48)+chr(l+48)
>> m = m+1
>>
>>
>> for i in range(1,3):
>>
>> cf_VP_xmf = XDMFReader(
>> FileName=wdir+'/VPfield/XDMF/cf_VP'+index[i]+'.xmf' )
>>
>> cf_VP_xmf.Sets = []
>> cf_VP_xmf.Grids = ['STL Grid']
>> cf_VP_xmf.PointArrays = ['Cf']
>>
>> RenderView1 = GetRenderView()
>> RenderView1.CenterOfRotation = [6.2286853790283203e-06,
>> 2.5033950805664062e-06, 7.1227550506591797e-06]
>>
>> DataRepresentation1 = Show()
>> DataRepresentation1.EdgeColor = [0.0, 0.0, 0.50000762951094835]
>> DataRepresentation1.SelectionPointFieldDataArrayName = 'Cf'
>> DataRepresentation1.ColorArrayName = ('POINT_DATA', 'Cf')
>> DataRepresentation1.ScalarOpacityUnitDistance = 0.033928799990483226
>> DataRepresentation1.ScaleFactor = 0.099998557567596444
>>
>> a1_Cf_PVLookupTable = GetLookupTableForArray( "Cf", 1,
>> RGBPoints=[-0.0099065126851201057, 0.23000000000000001,
>> 0.29899999999999999, 0.754, 0.0097341262735426426, 0.86499999999999999,
>> 0.86499999999999999, 0.86499999999999999, 0.029374765232205391,
>> 0.70599999999999996, 0.016, 0.14999999999999999], VectorMode='Magnitude',
>> NanColor=[0.25, 0.0, 0.0], ColorSpace='Diverging',
>> ScalarRangeInitialized=1.0 )
>> a1_Cf_PiecewiseFunction = CreatePiecewiseFunction(
>> Points=[-0.0099065126851201057, 0.0, 0.5, 0.0, 0.029374765232205391, 1.0,
>> 0.5, 0.0] )
>>
>> DataRepresentation1.ScalarOpacityFunction = a1_Cf_PiecewiseFunction
>> DataRepresentation1.LookupTable = a1_Cf_PVLookupTable
>>
>> a1_Cf_PVLookupTable.ScalarOpacityFunction = a1_Cf_PiecewiseFunction
>>
>> a1_Cf_PVLookupTable.RGBPoints = [cfmin, 0.23000000000000001,
>> 0.29899999999999999, 0.754, -0.002, 0.86499999999999999,
>> 0.86499999999999999, 0.86499999999999999, cfmax, 0.70599999999999996,
>> 0.016, 0.14999999999999999]
>> a1_Cf_PVLookupTable.ScalarOpacityFunction = a1_Cf_PiecewiseFunction
>> a1_Cf_PVLookupTable.LockScalarRange = 1
>>
>> RenderView1.CameraPosition = [6.2286853790283203e-06,
>> 2.5033950805664062e-06, 3.3460035306026636]
>> RenderView1.CameraFocalPoint = [6.2286853790283203e-06,
>> 2.5033950805664062e-06, 7.1227550506591797e-06]
>> RenderView1.CameraClippingRange = [2.3175641399614015,
>> 4.6486514901655163]
>> RenderView1.CameraParallelScale = 0.86600759519558368
>>
>> Contour1 = Contour( PointMergeMethod="Uniform Binning" )
>>
>> Contour1.PointMergeMethod = "Uniform Binning"
>> Contour1.ContourBy = ['POINTS', 'Cf']
>> Contour1.Isosurfaces = [0.0097341262735426426]
>>
>> DataRepresentation2 = Show()
>> DataRepresentation2.ColorArrayName = ('POINT_DATA', '')
>> DataRepresentation2.ScaleFactor = 0.099971860647201538
>> DataRepresentation2.SelectionPointFieldDataArrayName = 'Cf'
>> DataRepresentation2.EdgeColor = [0.0, 0.0, 0.50000762951094835]
>>
>> DataRepresentation2.Representation = 'Wireframe'
>> DataRepresentation2.AmbientColor = [0.0, 0.0, 0.0]
>>
>> DataRepresentation1.Visibility = 0
>>
>> RenderView1.CameraClippingRange = [2.7470738944403328,
>> 4.2397684828477349]
>>
>> DataRepresentation1.Visibility = 1
>>
>> RenderView1.CameraClippingRange = [2.3175641399614015,
>> 4.6486514901655163]
>>
>> Q_VP_xmf = XDMFReader(
>> FileName=wdir+'/VPfield/XDMF/Q_VP'+index[i]+'.xmf' )
>>
>> Contour1.Isosurfaces = [0.0]
>>
>> Q_VP_xmf.Sets = []
>> Q_VP_xmf.Grids = ['Eulerian Grid']
>> Q_VP_xmf.PointArrays = ['Q']
>>
>> DataRepresentation3 = Show()
>> DataRepresentation3.EdgeColor = [0.0, 0.0, 0.50000762951094835]
>> DataRepresentation3.SelectionPointFieldDataArrayName = 'Q'
>> DataRepresentation3.ScalarOpacityUnitDistance = 0.0045778956118952439
>> DataRepresentation3.Representation = 'Outline'
>> DataRepresentation3.ScaleFactor = 0.25585924386978148
>>
>> RenderView1.CameraClippingRange = [0.30866115510384229,
>> 6.1311800002592065]
>>
>> Contour2 = Contour( PointMergeMethod="Uniform Binning" )
>>
>> Contour2.PointMergeMethod = "Uniform Binning"
>> Contour2.ContourBy = ['POINTS', 'Q']
>> Contour2.Isosurfaces = [-348374.28125]
>>
>> DataRepresentation4 = Show()
>> DataRepresentation4.ScaleFactor = 0.1348903000354767
>> DataRepresentation4.SelectionPointFieldDataArrayName = 'Normals'
>> DataRepresentation4.EdgeColor = [0.0, 0.0, 0.50000762951094835]
>>
>> Contour2.Isosurfaces = [0.5]
>>
>> DataRepresentation3.Visibility = 0
>>
>> RenderView1.CameraClippingRange = [0.46635874330917981,
>> 5.5760844897764175]
>>
>> RenderView1.CameraViewUp = [-1.0, 0.0, 0.0]
>> RenderView1.CameraPosition = [-5.0, 0.0, 5.0]
>> RenderView1.CameraClippingRange = [3.0180305778980254,
>> 7.5069525367021557]
>> RenderView1.CameraFocalPoint = [0.0, 0.0, 5.0]
>> RenderView1.CameraParallelScale = 1.565457167140391
>> RenderView1.CenterOfRotation = [0.0, 0.0, 0.0]
>>
>> RenderView1.CameraFocalPoint = [0.0, 0.0, 0.5]
>> RenderView1.CameraClippingRange = [0.86197012554183883,
>> 4.2263653610655147]
>> RenderView1.CameraPosition = [0.0, -2.5, 0.0]
>>
>> WriteImage(wdir+'/POSTPRO/IMAGES/Q_cf_VP'+index[i]+'.jpg')
>>
>> Delete(DataRepresentation4)
>> Delete(Contour2)
>> Delete(DataRepresentation3)
>> Delete(Q_VP_xmf)
>>
>> Delete(DataRepresentation2)
>> Delete(Contour1)
>> Delete(DataRepresentation1)
>> Delete(cf_VP_xmf)
>>
>> The script was created by running an interactive Paraview session and
>> recording the commands. I then modified it slightly to add the loop and
>> some variables.
>>
>> I have been able to run the script successfully on 1,2,16 and 32 cores
>> successfully and it loops twice. However when I try to run on 64 cores I
>> get the following error message:
>>
>> [node116:58372] 63 more processes have sent help message
>> help-mpi-common-cuda.txt / dlopen failed
>> [node116:58372] Set MCA parameter "orte_base_help_aggregate" to 0 to see
>> all help / error messages
>> terminate called after throwing an instance of 'std::bad_alloc'
>> what(): std::bad_alloc
>> [node125:37180] *** Process received signal ***
>> [node125:37180] Signal: Aborted (6)
>> [node125:37180] Signal code: (-6)
>> [node125:37180] [ 0] /lib64/libpthread.so.0(+0xf710) [0x2aaab28f3710]
>> [node125:37180] [ 1] /lib64/libc.so.6(gsignal+0x35) [0x2aaab479f625]
>> [node125:37180] [ 2] /lib64/libc.so.6(abort+0x175) [0x2aaab47a0e05]
>> [node125:37180] [ 3]
>> /usr/lib64/libstdc++.so.6(_ZN9__gnu_cxx27__verbose_terminate_handlerEv+0x12d)
>> [0x2aaab408aa7d]
>> [node125:37180] [ 4] /usr/lib64/libstdc++.so.6(+0xbcbd6) [0x2aaab4088bd6]
>> [node125:37180] [ 5] /usr/lib64/libstdc++.so.6(+0xbcc03) [0x2aaab4088c03]
>> [node125:37180] [ 6] /usr/lib64/libstdc++.so.6(+0xbcd22) [0x2aaab4088d22]
>> [node125:37180] [ 7] /usr/lib64/libstdc++.so.6(_Znwm+0x7d)
>> [0x2aaab408911d]
>> [node125:37180] [ 8] /usr/lib64/libstdc++.so.6(_Znam+0x9) [0x2aaab40891d9]
>> [node125:37180] [ 9]
>> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData10ReadPointsEP12XdmfGeometryPiS2_+0x3a6)
>> [0x2aaab716310c]
>> [node125:37180] [10]
>> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData21RequestStructuredGridEP8XdmfGrid+0xfb)
>> [0x2aaab716292f]
>> [node125:37180] [11]
>> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData15ReadUniformDataEP8XdmfGrid+0x14c)
>> [0x2aaab71614ce]
>> [node125:37180] [12]
>> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData8ReadDataEP8XdmfGrid+0xd1)
>> [0x2aaab7160c91]
>> [node125:37180] [13]
>> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData8ReadDataEv+0x4f)
>> [0x2aaab7160a0f]
>> [node125:37180] [14]
>> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN13vtkXdmfReader11RequestDataEP14vtkInformationPP20vtkInformationVectorS3_+0x31c)
>> [0x2aaab716daf0]
>> [node125:37180] [15]
>> /c1/apps/paraview/4.1.0/lib/libvtkIOLegacy-pv4.1.so.1(_ZN13vtkDataReader14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x62)
>> [0x2aaab0b3b9be]
>> [node125:37180] [16]
>> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN13vtkXdmfReader14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x76)
>> [0x2aaab716c702]
>> [node125:37180] [17]
>> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN12vtkExecutive13CallAlgorithmEP14vtkInformationiPP20vtkInformationVectorS3_+0x8d)
>> [0x2aaab10c63d1]
>> [node125:37180] [18]
>> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline11ExecuteDataEP14vtkInformationPP20vtkInformationVectorS3_+0x76)
>> [0x2aaab10c0b1c]
>> [node125:37180] [19]
>> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN24vtkCompositeDataPipeline11ExecuteDataEP14vtkInformationPP20vtkInformationVectorS3_+0x468)
>> [0x2aaab10b9950]
>> [node125:37180] [20]
>> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x522)
>> [0x2aaab10c0248]
>> [node125:37180] [21]
>> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0xa6c)
>> [0x2aaab10e5ace]
>> [node125:37180] [22]
>> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN24vtkCompositeDataPipeline15ForwardUpstreamEP14vtkInformation+0x2d6)
>> [0x2aaab10bbb6e]
>> [node125:37180] [23]
>> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x48a)
>> [0x2aaab10c01b0]
>> [node125:37180] [24]
>> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0xa6c)
>> [0x2aaab10e5ace]
>> [node125:37180] [25]
>> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline10UpdateDataEi+0x2fb)
>> [0x2aaab10c0965]
>> [node125:37180] [26]
>> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline6UpdateEi+0xf8)
>> [0x2aaab10e5d3e]
>> [node125:37180] [27]
>> /c1/apps/paraview/4.1.0/lib/libvtkPVServerImplementationCore-pv4.1.so.1(_ZN16vtkSISourceProxy14UpdatePipelineEidb+0x196)
>> [0x2aaaac77ef72]
>> [node125:37180] [28]
>> /c1/apps/paraview/4.1.0/lib/libvtkPVServerManagerApplication-pv4.1.so.1(_Z23vtkSISourceProxyCommandP26vtkClientServerInterpreterP13vtkObjectBasePKcRK21vtkClientServerStreamRS5_Pv+0x6ee)
>> [0x2aaaab7f27bd]
>> [node125:37180] [29]
>> /c1/apps/paraview/4.1.0/lib/libvtkClientServer-pv4.1.so.1(_ZN26vtkClientServerInterpreter19CallCommandFunctionEPKcP13vtkObjectBaseS1_RK21vtkClientServerStreamRS4_+0x343)
>> [0x2aaaafb57aa5]
>> [node125:37180] *** End of error message ***
>>
>> I am afraid there is an issue with memory leakage or improper memory
>> allocation and deallocation. At this point I do not know how to proceed to
>> debug it. Is there an obvious problem in in the script and the way datasets
>> are deallocated at the end of each iteration?
>>
>> Regards,
>>
>> Nikos
>>
>
>
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From teojgor at gmail.com Thu Jan 8 16:57:55 2015
From: teojgor at gmail.com (Teo Ioannis)
Date: Thu, 8 Jan 2015 23:57:55 +0200
Subject: [Paraview] Help with 'Plot Selection Over Time' Filter
Message-ID: <CAOX0pDeLMW9fEC1Mzb1t-7GHENXaySom5q7d_cBZsgeX4ZA99w@mail.gmail.com>
I am having the following problem with paraview. I have a .pvd which refers
to 6000-8000 .vtu files one for each time step. Each .vtu file contains
information for a finite element mesh consisting of 40000-50000 nodes in 3
dimensions and contains vector values for displacement , velocity and
acceleration. I load the .pvd file andi nteract with the model or watch the
animation and everything is fine. The problem starts when I select a
certain node and choose 'plot selection over time' filter. The moment I
press 'Apply' in the pipeline browser, paraview becomes unresponsive and I
have to wait for about 5 minutes for the chart to appear. My pc has 16gb of
ram and an i7 4970k cpu so I don't think that the problem is lack of
resources . Am I doing something wrong? If show can you give me a hint
where to look for a faster solution (a python script maybe) or is this kind
of performance normal for my case?
Thank you very much.
Manitaras Theofilos
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From wascott at sandia.gov Thu Jan 8 17:16:08 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Thu, 8 Jan 2015 22:16:08 +0000
Subject: [Paraview] [EXTERNAL] Help with 'Plot Selection Over Time'
Filter
In-Reply-To: <CAOX0pDeLMW9fEC1Mzb1t-7GHENXaySom5q7d_cBZsgeX4ZA99w@mail.gmail.com>
References: <CAOX0pDeLMW9fEC1Mzb1t-7GHENXaySom5q7d_cBZsgeX4ZA99w@mail.gmail.com>
Message-ID: <f7ffc4e08024483ab144c1f0058431ba@ES05AMSNLNT.srn.sandia.gov>
Teo,
Just guessing here, but your wait time is very likely the number of files. Plot selection over time will have to open, read, process, and close each of those files. Try just ?play? for all of the timesteps ? I bet it takes numerous minutes also. We often run problems (usually fewer timesteps, usually 10 to 1000 times bigger datasets) that take hours to run (either creating movies or plot selection over time) on some big iron clusters.
Just to make sure you aren?t running out of memory, try opening the memory inspector. View/ Memory Inspector. Or, open the Task Manager and look at free memory.
Alan
From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Teo Ioannis
Sent: Thursday, January 08, 2015 2:58 PM
To: paraview
Subject: [EXTERNAL] [Paraview] Help with 'Plot Selection Over Time' Filter
I am having the following problem with paraview. I have a .pvd which refers to 6000-8000 .vtu files one for each time step. Each .vtu file contains information for a finite element mesh consisting of 40000-50000 nodes in 3 dimensions and contains vector values for displacement , velocity and acceleration. I load the .pvd file andi nteract with the model or watch the animation and everything is fine. The problem starts when I select a certain node and choose 'plot selection over time' filter. The moment I press 'Apply' in the pipeline browser, paraview becomes unresponsive and I have to wait for about 5 minutes for the chart to appear. My pc has 16gb of ram and an i7 4970k cpu so I don't think that the problem is lack of resources . Am I doing something wrong? If show can you give me a hint where to look for a faster solution (a python script maybe) or is this kind of performance normal for my case?
Thank you very much.
Manitaras Theofilos
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From richard.grenon at onera.fr Fri Jan 9 09:16:51 2015
From: richard.grenon at onera.fr (Richard Grenon)
Date: Fri, 09 Jan 2015 15:16:51 +0100
Subject: [Paraview] PV 420 unable to read state file from PV 410
In-Reply-To: <542BB2F6.40209@onera.fr>
References: <542A9896.7020201@onera.fr> <542AAEC7.7040405@onera.fr>
<CADHSJjDdkdGTQ94TkUtoTn53B=196z7kJjS=Dp_pBm_2=_pwSw@mail.gmail.com>
<542BB2F6.40209@onera.fr>
Message-ID: <54AFE2D3.4050506@onera.fr>
Hello,
Same problem with PV 4.3.0 RC1 (tested on Linux 64 bits binaries)
Best regards.
Richard
Le 01/10/2014 09:53, Richard Grenon a ?crit :
> Hello Utkarsh.
>
> I attach an archive tar.gz file that contains two short structured
> datasets and two pvsm state files:
>
> * dataset1.tp = ASCII Tecplot file that contains an IxJ structured
> surface.
> * dataset2.tp = ASCII Tecplot file that contains an IxJ structured
> surface having a common boundary with the first one.
> * merge.pvsm: reproduces the bad plot with missing part of surface
> after MergeBlocks.
> * merge420.pvsm : no missing part after MergeBlocks, but error message.
>
> "merge.pvsm" and "merge420.pvsm" contain the same simple pipeline, but
> components were added in a different order.
>
> Richard
>
--
Richard GRENON
ONERA
Departement d'Aerodynamique Appliquee - DAAP/ACI
8 rue des Vertugadins
92190 MEUDON - FRANCE
phone : +33 1 46 73 42 17
fax : +33 1 46 73 41 46
mailto:Richard.Grenon at onera.fr
http://www.onera.fr
From burlen.loring at gmail.com Fri Jan 9 10:37:12 2015
From: burlen.loring at gmail.com (Burlen Loring)
Date: Fri, 09 Jan 2015 07:37:12 -0800
Subject: [Paraview] Help with memory crash?
In-Reply-To: <CALdMxnyj7Wf2e2YBoZ_X1Dm1ugwe-V_RZ+J3vGU6FexE5FjP_g@mail.gmail.com>
References: <CALdMxnzf+9+X38HWzsvX2-Ytxq+uhDkracVznkmyVQ-UK8tdjg@mail.gmail.com>
<CALdMxnzgu7mQxrrE1Tr7O7MHpuJmyqXn8t3a=gmODv1BuPbFhg@mail.gmail.com>
<CALdMxnyj7Wf2e2YBoZ_X1Dm1ugwe-V_RZ+J3vGU6FexE5FjP_g@mail.gmail.com>
Message-ID: <54AFF5A8.70304@gmail.com>
Hi Nikolaos,
One thing that I would suggest is to restructure your script so that you
do not create new objects inside your loop. You can usually construct
your rendering pipeline first then loop over the files(times, arrays,
etc) modifying the existing pipeline objects and then calling Render
followed by WriteImage. When you write your script that way you avoid
the possibility of creating leaks. If you are convinced that there is a
leak in ParaView we could advise on locating it, however I hesitate to
give that advise prematurely. It's more likely that the issues are
resulting from the way your script is structured.
Burlen
On 01/08/2015 09:57 AM, Nikolaos Beratlis wrote:
> After reading about memory leaks I modified the script at the end by
> adding "del" after "Delete":
>
> Delete(DataRepresentation4)
> del DataRepresentation4
> Delete(Contour2)
> del Contour2
> Delete(DataRepresentation3)
> del DataRepresentation3
> Delete(Q_VP_xmf)
> del Q_VP_xmf
> Delete(DataRepresentation2)
> del DataRepresentation2
> Delete(Contour1)
> del Contour1
> Delete(DataRepresentation1)
> del DataRepresentation1
> Delete(cf_VP_xmf)
> del cf_VP_xmf
>
> That should fully delete the objects from the memory and it helped a
> little but I still have memory leaks. Before the script memory usage
> in the Memory Inspector is 1.4Gb and after one iteration it increases
> to 4Gb, compared to 10Gb without the del statements. After 4
> iterations the memory usage increases to 8Gb. Any ideas on how to
> track and eliminate completely the memory leaks? I am forgetting to
> delete an object from the script?
>
>
>
> On Wed, Jan 7, 2015 at 9:17 PM, Nikolaos Beratlis
> <nikos.beratlis at gmail.com <mailto:nikos.beratlis at gmail.com>> wrote:
>
> So I did some more tests by running the script interactively. I
> used a smaller grid first, 2002 x 20 x 1000 points and ran it only
> for 1 iteration. When Paraview loaded the memory usage on the
> server was 1.04GB. After doing one iteration the memory usage
> spiked to 10.42GB and remained like that when the script finished.
> What I found out is the Delete statements make no difference at
> all, with or without them the memory usage remained 10.42GB.
> Performing more iterations in the script actually worsens this
> problem, after 4 iterations the memory used increased to 14.32GB.
> With a larger grid of 2002 x 100 x 1000 points the memory after
> one iteration increased from 10.42GB before the script to 45.25GB
> after the script. How can I properly delete all datasets and clear
> the memory in Paraview?
>
>
>
> On Wed, Jan 7, 2015 at 2:55 PM, Nikolaos Beratlis
> <nikos.beratlis at gmail.com <mailto:nikos.beratlis at gmail.com>> wrote:
>
> I am trying to run a script on a cluster with Paraview in
> parallel. The cluster architecture is 16cores and 64GB per
> node. The script reads in two XMF files, one contains a grid
> of 2002x100x1000 points along with one variable. There is a
> loop to perform two iterations:
>
> try: paraview.simple
> except: from paraview.simple import *
> paraview.simple._DisableFirstRenderCameraReset()
>
> RenderView1 = GetRenderView()
> RenderView1.Background = [1.0, 1.0, 1.0]
> view = GetActiveView()
> view.ViewSize = [ 800, 500 ]
>
> RenderView1.CenterAxesVisibility = 0
> #RenderView1.OrientationAxesVisibility = 0
>
> #Define variables
> wdir =
> '/lustre/groups/balarasgrp/nikosb/Research/Simulations/golfball/stationary/S120/Re200000/gridC1/run_wm'
> #wdir =
> '/Users/nikosb/colone/Research/Simulations/golfball/stationary/S120/Re200000/gridC1/run_wm'
> #wdir =
> '/Users/nikosb/Research/Simulations/SPHERE/Re100/gridC1/run'
> Qval = 0.1
> cfmin = -0.001
> cfmax = 0.005
>
> index = [None]*9999
>
> m = 0
> for i in range(0, 9):
> for j in range(0, 9):
> for k in range(0, 9):
> for l in range(0, 9):
> index[m] = chr(i+48)+chr(j+48)+chr(k+48)+chr(l+48)
> m = m+1
>
>
> for i in range(1,3):
>
> cf_VP_xmf = XDMFReader(
> FileName=wdir+'/VPfield/XDMF/cf_VP'+index[i]+'.xmf' )
>
> cf_VP_xmf.Sets = []
> cf_VP_xmf.Grids = ['STL Grid']
> cf_VP_xmf.PointArrays = ['Cf']
>
> RenderView1 = GetRenderView()
> RenderView1.CenterOfRotation = [6.2286853790283203e-06,
> 2.5033950805664062e-06, 7.1227550506591797e-06]
>
> DataRepresentation1 = Show()
> DataRepresentation1.EdgeColor = [0.0, 0.0, 0.50000762951094835]
> DataRepresentation1.SelectionPointFieldDataArrayName = 'Cf'
> DataRepresentation1.ColorArrayName = ('POINT_DATA', 'Cf')
> DataRepresentation1.ScalarOpacityUnitDistance =
> 0.033928799990483226
> DataRepresentation1.ScaleFactor = 0.099998557567596444
>
> a1_Cf_PVLookupTable = GetLookupTableForArray( "Cf", 1,
> RGBPoints=[-0.0099065126851201057, 0.23000000000000001,
> 0.29899999999999999, 0.754, 0.0097341262735426426,
> 0.86499999999999999, 0.86499999999999999, 0.86499999999999999,
> 0.029374765232205391, 0.70599999999999996, 0.016,
> 0.14999999999999999], VectorMode='Magnitude', NanColor=[0.25,
> 0.0, 0.0], ColorSpace='Diverging', ScalarRangeInitialized=1.0 )
> a1_Cf_PiecewiseFunction = CreatePiecewiseFunction(
> Points=[-0.0099065126851201057, 0.0, 0.5, 0.0,
> 0.029374765232205391, 1.0, 0.5, 0.0] )
>
> DataRepresentation1.ScalarOpacityFunction =
> a1_Cf_PiecewiseFunction
> DataRepresentation1.LookupTable = a1_Cf_PVLookupTable
>
> a1_Cf_PVLookupTable.ScalarOpacityFunction =
> a1_Cf_PiecewiseFunction
>
> a1_Cf_PVLookupTable.RGBPoints = [cfmin, 0.23000000000000001,
> 0.29899999999999999, 0.754, -0.002, 0.86499999999999999,
> 0.86499999999999999, 0.86499999999999999, cfmax,
> 0.70599999999999996, 0.016, 0.14999999999999999]
> a1_Cf_PVLookupTable.ScalarOpacityFunction =
> a1_Cf_PiecewiseFunction
> a1_Cf_PVLookupTable.LockScalarRange = 1
>
> RenderView1.CameraPosition = [6.2286853790283203e-06,
> 2.5033950805664062e-06, 3.3460035306026636]
> RenderView1.CameraFocalPoint = [6.2286853790283203e-06,
> 2.5033950805664062e-06, 7.1227550506591797e-06]
> RenderView1.CameraClippingRange = [2.3175641399614015,
> 4.6486514901655163]
> RenderView1.CameraParallelScale = 0.86600759519558368
>
> Contour1 = Contour( PointMergeMethod="Uniform Binning" )
>
> Contour1.PointMergeMethod = "Uniform Binning"
> Contour1.ContourBy = ['POINTS', 'Cf']
> Contour1.Isosurfaces = [0.0097341262735426426]
>
> DataRepresentation2 = Show()
> DataRepresentation2.ColorArrayName = ('POINT_DATA', '')
> DataRepresentation2.ScaleFactor = 0.099971860647201538
> DataRepresentation2.SelectionPointFieldDataArrayName = 'Cf'
> DataRepresentation2.EdgeColor = [0.0, 0.0, 0.50000762951094835]
>
> DataRepresentation2.Representation = 'Wireframe'
> DataRepresentation2.AmbientColor = [0.0, 0.0, 0.0]
>
> DataRepresentation1.Visibility = 0
>
> RenderView1.CameraClippingRange = [2.7470738944403328,
> 4.2397684828477349]
>
> DataRepresentation1.Visibility = 1
>
> RenderView1.CameraClippingRange = [2.3175641399614015,
> 4.6486514901655163]
>
> Q_VP_xmf = XDMFReader(
> FileName=wdir+'/VPfield/XDMF/Q_VP'+index[i]+'.xmf' )
>
> Contour1.Isosurfaces = [0.0]
>
> Q_VP_xmf.Sets = []
> Q_VP_xmf.Grids = ['Eulerian Grid']
> Q_VP_xmf.PointArrays = ['Q']
>
> DataRepresentation3 = Show()
> DataRepresentation3.EdgeColor = [0.0, 0.0, 0.50000762951094835]
> DataRepresentation3.SelectionPointFieldDataArrayName = 'Q'
> DataRepresentation3.ScalarOpacityUnitDistance =
> 0.0045778956118952439
> DataRepresentation3.Representation = 'Outline'
> DataRepresentation3.ScaleFactor = 0.25585924386978148
>
> RenderView1.CameraClippingRange = [0.30866115510384229,
> 6.1311800002592065]
>
> Contour2 = Contour( PointMergeMethod="Uniform Binning" )
>
> Contour2.PointMergeMethod = "Uniform Binning"
> Contour2.ContourBy = ['POINTS', 'Q']
> Contour2.Isosurfaces = [-348374.28125]
>
> DataRepresentation4 = Show()
> DataRepresentation4.ScaleFactor = 0.1348903000354767
> DataRepresentation4.SelectionPointFieldDataArrayName = 'Normals'
> DataRepresentation4.EdgeColor = [0.0, 0.0, 0.50000762951094835]
>
> Contour2.Isosurfaces = [0.5]
>
> DataRepresentation3.Visibility = 0
>
> RenderView1.CameraClippingRange = [0.46635874330917981,
> 5.5760844897764175]
>
> RenderView1.CameraViewUp = [-1.0, 0.0, 0.0]
> RenderView1.CameraPosition = [-5.0, 0.0, 5.0]
> RenderView1.CameraClippingRange = [3.0180305778980254,
> 7.5069525367021557]
> RenderView1.CameraFocalPoint = [0.0, 0.0, 5.0]
> RenderView1.CameraParallelScale = 1.565457167140391
> RenderView1.CenterOfRotation = [0.0, 0.0, 0.0]
>
> RenderView1.CameraFocalPoint = [0.0, 0.0, 0.5]
> RenderView1.CameraClippingRange = [0.86197012554183883,
> 4.2263653610655147]
> RenderView1.CameraPosition = [0.0, -2.5, 0.0]
>
> WriteImage(wdir+'/POSTPRO/IMAGES/Q_cf_VP'+index[i]+'.jpg')
>
> Delete(DataRepresentation4)
> Delete(Contour2)
> Delete(DataRepresentation3)
> Delete(Q_VP_xmf)
>
> Delete(DataRepresentation2)
> Delete(Contour1)
> Delete(DataRepresentation1)
> Delete(cf_VP_xmf)
>
> The script was created by running an interactive Paraview
> session and recording the commands. I then modified it
> slightly to add the loop and some variables.
>
> I have been able to run the script successfully on 1,2,16 and
> 32 cores successfully and it loops twice. However when I try
> to run on 64 cores I get the following error message:
>
> [node116:58372] 63 more processes have sent help message
> help-mpi-common-cuda.txt / dlopen failed
> [node116:58372] Set MCA parameter "orte_base_help_aggregate"
> to 0 to see all help / error messages
> terminate called after throwing an instance of 'std::bad_alloc'
> what(): std::bad_alloc
> [node125:37180] *** Process received signal ***
> [node125:37180] Signal: Aborted (6)
> [node125:37180] Signal code: (-6)
> [node125:37180] [ 0] /lib64/libpthread.so.0(+0xf710)
> [0x2aaab28f3710]
> [node125:37180] [ 1] /lib64/libc.so.6(gsignal+0x35)
> [0x2aaab479f625]
> [node125:37180] [ 2] /lib64/libc.so.6(abort+0x175)
> [0x2aaab47a0e05]
> [node125:37180] [ 3]
> /usr/lib64/libstdc++.so.6(_ZN9__gnu_cxx27__verbose_terminate_handlerEv+0x12d)
> [0x2aaab408aa7d]
> [node125:37180] [ 4] /usr/lib64/libstdc++.so.6(+0xbcbd6)
> [0x2aaab4088bd6]
> [node125:37180] [ 5] /usr/lib64/libstdc++.so.6(+0xbcc03)
> [0x2aaab4088c03]
> [node125:37180] [ 6] /usr/lib64/libstdc++.so.6(+0xbcd22)
> [0x2aaab4088d22]
> [node125:37180] [ 7] /usr/lib64/libstdc++.so.6(_Znwm+0x7d)
> [0x2aaab408911d]
> [node125:37180] [ 8] /usr/lib64/libstdc++.so.6(_Znam+0x9)
> [0x2aaab40891d9]
> [node125:37180] [ 9]
> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData10ReadPointsEP12XdmfGeometryPiS2_+0x3a6)
> [0x2aaab716310c]
> [node125:37180] [10]
> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData21RequestStructuredGridEP8XdmfGrid+0xfb)
> [0x2aaab716292f]
> [node125:37180] [11]
> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData15ReadUniformDataEP8XdmfGrid+0x14c)
> [0x2aaab71614ce]
> [node125:37180] [12]
> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData8ReadDataEP8XdmfGrid+0xd1)
> [0x2aaab7160c91]
> [node125:37180] [13]
> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN16vtkXdmfHeavyData8ReadDataEv+0x4f)
> [0x2aaab7160a0f]
> [node125:37180] [14]
> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN13vtkXdmfReader11RequestDataEP14vtkInformationPP20vtkInformationVectorS3_+0x31c)
> [0x2aaab716daf0]
> [node125:37180] [15]
> /c1/apps/paraview/4.1.0/lib/libvtkIOLegacy-pv4.1.so.1(_ZN13vtkDataReader14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x62)
> [0x2aaab0b3b9be]
> [node125:37180] [16]
> /c1/apps/paraview/4.1.0/lib/libvtkIOXdmf2-pv4.1.so.1(_ZN13vtkXdmfReader14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x76)
> [0x2aaab716c702]
> [node125:37180] [17]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN12vtkExecutive13CallAlgorithmEP14vtkInformationiPP20vtkInformationVectorS3_+0x8d)
> [0x2aaab10c63d1]
> [node125:37180] [18]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline11ExecuteDataEP14vtkInformationPP20vtkInformationVectorS3_+0x76)
> [0x2aaab10c0b1c]
> [node125:37180] [19]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN24vtkCompositeDataPipeline11ExecuteDataEP14vtkInformationPP20vtkInformationVectorS3_+0x468)
> [0x2aaab10b9950]
> [node125:37180] [20]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x522)
> [0x2aaab10c0248]
> [node125:37180] [21]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0xa6c)
> [0x2aaab10e5ace]
> [node125:37180] [22]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN24vtkCompositeDataPipeline15ForwardUpstreamEP14vtkInformation+0x2d6)
> [0x2aaab10bbb6e]
> [node125:37180] [23]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x48a)
> [0x2aaab10c01b0]
> [node125:37180] [24]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0xa6c)
> [0x2aaab10e5ace]
> [node125:37180] [25]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline10UpdateDataEi+0x2fb)
> [0x2aaab10c0965]
> [node125:37180] [26]
> /c1/apps/paraview/4.1.0/lib/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline6UpdateEi+0xf8)
> [0x2aaab10e5d3e]
> [node125:37180] [27]
> /c1/apps/paraview/4.1.0/lib/libvtkPVServerImplementationCore-pv4.1.so.1(_ZN16vtkSISourceProxy14UpdatePipelineEidb+0x196)
> [0x2aaaac77ef72]
> [node125:37180] [28]
> /c1/apps/paraview/4.1.0/lib/libvtkPVServerManagerApplication-pv4.1.so.1(_Z23vtkSISourceProxyCommandP26vtkClientServerInterpreterP13vtkObjectBasePKcRK21vtkClientServerStreamRS5_Pv+0x6ee)
> [0x2aaaab7f27bd]
> [node125:37180] [29]
> /c1/apps/paraview/4.1.0/lib/libvtkClientServer-pv4.1.so.1(_ZN26vtkClientServerInterpreter19CallCommandFunctionEPKcP13vtkObjectBaseS1_RK21vtkClientServerStreamRS4_+0x343)
> [0x2aaaafb57aa5]
> [node125:37180] *** End of error message ***
>
> I am afraid there is an issue with memory leakage or improper
> memory allocation and deallocation. At this point I do not
> know how to proceed to debug it. Is there an obvious problem
> in in the script and the way datasets are deallocated at the
> end of each iteration?
>
> Regards,
>
> Nikos
>
>
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
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From utkarsh.ayachit at kitware.com Fri Jan 9 10:54:12 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Fri, 9 Jan 2015 10:54:12 -0500
Subject: [Paraview] PV 420 unable to read state file from PV 410
In-Reply-To: <54AFE2D3.4050506@onera.fr>
References: <542A9896.7020201@onera.fr> <542AAEC7.7040405@onera.fr>
<CADHSJjDdkdGTQ94TkUtoTn53B=196z7kJjS=Dp_pBm_2=_pwSw@mail.gmail.com>
<542BB2F6.40209@onera.fr> <54AFE2D3.4050506@onera.fr>
Message-ID: <CADHSJjCpiM=WFDNYgFWdPs7aWYQJOmR=1dn7mwmNw0SheU6s6Q@mail.gmail.com>
There have been changes merged in git/master since RC1. It should be
fixed in the next RC.
On Fri, Jan 9, 2015 at 9:16 AM, Richard Grenon <richard.grenon at onera.fr> wrote:
> Hello,
>
> Same problem with PV 4.3.0 RC1 (tested on Linux 64 bits binaries)
>
> Best regards.
>
> Richard
>
>
> Le 01/10/2014 09:53, Richard Grenon a ?crit :
>>
>> Hello Utkarsh.
>>
>> I attach an archive tar.gz file that contains two short structured
>> datasets and two pvsm state files:
>>
>> * dataset1.tp = ASCII Tecplot file that contains an IxJ structured
>> surface.
>> * dataset2.tp = ASCII Tecplot file that contains an IxJ structured surface
>> having a common boundary with the first one.
>> * merge.pvsm: reproduces the bad plot with missing part of surface after
>> MergeBlocks.
>> * merge420.pvsm : no missing part after MergeBlocks, but error message.
>>
>> "merge.pvsm" and "merge420.pvsm" contain the same simple pipeline, but
>> components were added in a different order.
>>
>> Richard
>>
>
>
> --
> Richard GRENON
> ONERA
> Departement d'Aerodynamique Appliquee - DAAP/ACI
> 8 rue des Vertugadins
> 92190 MEUDON - FRANCE
> phone : +33 1 46 73 42 17
> fax : +33 1 46 73 41 46
> mailto:Richard.Grenon at onera.fr
> http://www.onera.fr
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
From jeffrey.c.becker at nasa.gov Fri Jan 9 12:59:57 2015
From: jeffrey.c.becker at nasa.gov (Jeff Becker)
Date: Fri, 9 Jan 2015 09:59:57 -0800
Subject: [Paraview] paraview cmake can't find proper qt
Message-ID: <54B0171D.3010809@nasa.gov>
Hi. My initial run of ccmake complained that my distro's qt was too old,
so I downloaded and built/installed a supported version in
/usr/local/Trolltech/Qt-4.8.6. Thus I set:
//Where can the qmake-qt4 library be found
QT_QMAKE_EXECUTABLE:FILEPATH=/usr/local/Trolltech/Qt-4.8.6/bin/qmake
However, even though ccmake completes (allowing the g key to be
activated), the qt libraries/executables listed in CMakeCache.txt are
all from the distro's versions (in /usr/lib64/qt4). E.g.,
//Path to a library.
QT_CUSTOMWIDGETPLUGIN_PLUGIN_RELEASE:FILEPATH=/usr/lib64/qt4/plugins/designer/libcustomwidgetplugin.so
//Path to a program.
QT_DBUSCPP2XML_EXECUTABLE:FILEPATH=/usr/lib64/qt4/bin/qdbuscpp2xml
Is there a QTHOME or similar variable I need to set to get the right
libraries/executables? Thanks.
-jeff
From burlen.loring at gmail.com Fri Jan 9 14:10:05 2015
From: burlen.loring at gmail.com (Burlen Loring)
Date: Fri, 09 Jan 2015 11:10:05 -0800
Subject: [Paraview] paraview cmake can't find proper qt
In-Reply-To: <54B0171D.3010809@nasa.gov>
References: <54B0171D.3010809@nasa.gov>
Message-ID: <54B0278D.3020404@gmail.com>
Hi Jeff,
Here are the vars that I set:
prepend-path PATH /work/apps/qt-4.8.2/bin
prepend-path MANPATH :/work/apps/qt-4.8.2/man
prepend-path LD_LIBRARY_PATH /work/apps/qt-4.8.2/lib
prepend-path LD_RUN_PATH /work/apps/qt-4.8.2/lib
after sourcing this, typing "which qmake" in the shell where you're
doing your build should print the path to your qt. then cmake should
find your qt.
the above is an excerpt from a module file
<http://modules.sourceforge.net/> which provides a convenient way to
manage multiple installs.
Burlen
On 01/09/2015 09:59 AM, Jeff Becker wrote:
> Hi. My initial run of ccmake complained that my distro's qt was too
> old, so I downloaded and built/installed a supported version in
> /usr/local/Trolltech/Qt-4.8.6. Thus I set:
>
> //Where can the qmake-qt4 library be found
> QT_QMAKE_EXECUTABLE:FILEPATH=/usr/local/Trolltech/Qt-4.8.6/bin/qmake
>
> However, even though ccmake completes (allowing the g key to be
> activated), the qt libraries/executables listed in CMakeCache.txt are
> all from the distro's versions (in /usr/lib64/qt4). E.g.,
>
> //Path to a library.
> QT_CUSTOMWIDGETPLUGIN_PLUGIN_RELEASE:FILEPATH=/usr/lib64/qt4/plugins/designer/libcustomwidgetplugin.so
>
>
> //Path to a program.
> QT_DBUSCPP2XML_EXECUTABLE:FILEPATH=/usr/lib64/qt4/bin/qdbuscpp2xml
>
> Is there a QTHOME or similar variable I need to set to get the right
> libraries/executables? Thanks.
>
> -jeff
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
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From ismarc7 at hotmail.com Fri Jan 9 13:52:23 2015
From: ismarc7 at hotmail.com (Liam)
Date: Fri, 9 Jan 2015 18:52:23 +0000 (UTC)
Subject: [Paraview] Python paraview.simple: Zoom To Data?
References: <CAK6Z60cjzMx+juFksXBuAt7S4L6m2qCiJ-F9+wfSctC8acmceQ@mail.gmail.com> <CAMetC=TP79TELr-FinMrZ=vO2FDyKXmc3g0VJbhK0oMCOSXcHA@mail.gmail.com>
<CAK6Z60f2vdyKnTwMeGosBsN+NCFMetkuSaiv5=5Gj7DWQ7C3zA@mail.gmail.com>
<4F6224A4.9060701@lbl.gov>
Message-ID: <loom.20150109T194901-160@post.gmane.org>
Hey guys,
Just one more question. How do you define:
far = config.camFac
I cannot find in the code neither config nor camFac variable, so anybody
could explain me how to compute far variable?
This code has helped me so much.
Yhanks in advance,
Liam
From jeffrey.c.becker at nasa.gov Fri Jan 9 14:30:22 2015
From: jeffrey.c.becker at nasa.gov (Jeff Becker)
Date: Fri, 9 Jan 2015 11:30:22 -0800
Subject: [Paraview] paraview cmake can't find proper qt
In-Reply-To: <54B0278D.3020404@gmail.com>
References: <54B0171D.3010809@nasa.gov> <54B0278D.3020404@gmail.com>
Message-ID: <54B02C4E.9050902@nasa.gov>
Thanks Burlen. That helped!
On 01/09/2015 11:10 AM, Burlen Loring wrote:
> Hi Jeff,
>
> Here are the vars that I set:
>
> prepend-path PATH /work/apps/qt-4.8.2/bin
> prepend-path MANPATH :/work/apps/qt-4.8.2/man
> prepend-path LD_LIBRARY_PATH /work/apps/qt-4.8.2/lib
> prepend-path LD_RUN_PATH /work/apps/qt-4.8.2/lib
>
> after sourcing this, typing "which qmake" in the shell where you're
> doing your build should print the path to your qt. then cmake should
> find your qt.
>
> the above is an excerpt from a module file
> <http://modules.sourceforge.net/> which provides a convenient way to
> manage multiple installs.
>
> Burlen
>
> On 01/09/2015 09:59 AM, Jeff Becker wrote:
>> Hi. My initial run of ccmake complained that my distro's qt was too
>> old, so I downloaded and built/installed a supported version in
>> /usr/local/Trolltech/Qt-4.8.6. Thus I set:
>>
>> //Where can the qmake-qt4 library be found
>> QT_QMAKE_EXECUTABLE:FILEPATH=/usr/local/Trolltech/Qt-4.8.6/bin/qmake
>>
>> However, even though ccmake completes (allowing the g key to be
>> activated), the qt libraries/executables listed in CMakeCache.txt are
>> all from the distro's versions (in /usr/lib64/qt4). E.g.,
>>
>> //Path to a library.
>> QT_CUSTOMWIDGETPLUGIN_PLUGIN_RELEASE:FILEPATH=/usr/lib64/qt4/plugins/designer/libcustomwidgetplugin.so
>>
>>
>> //Path to a program.
>> QT_DBUSCPP2XML_EXECUTABLE:FILEPATH=/usr/lib64/qt4/bin/qdbuscpp2xml
>>
>> Is there a QTHOME or similar variable I need to set to get the right
>> libraries/executables? Thanks.
>>
>> -jeff
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>
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From utkarsh.ayachit at kitware.com Fri Jan 9 14:57:31 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Fri, 9 Jan 2015 14:57:31 -0500
Subject: [Paraview] [EXTERNAL] Re: Trace recorder missing color preset
changes
In-Reply-To: <75f17d40903d493b97ac20c7b18aa283@ES05AMSNLNT.srn.sandia.gov>
References: <d13e0c0f5d344176a00b484f04c2378b@ES05AMSNLNT.srn.sandia.gov>
<CADHSJjCsQWfXwTfdVcW0A_CyQWMkW+KSAsbQx6=a4eqKzBEMJQ@mail.gmail.com>
<e2f9662b0b2e44aca2d6db9c631a8b84@ES05AMSNLNT.srn.sandia.gov>
<75f17d40903d493b97ac20c7b18aa283@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <CADHSJjAA11aj15VchFHFG5kNRTws7LpwwddwSRvELVn+DQS90A@mail.gmail.com>
Alan,
Here;s an example to load a color map XML
lut = GetColorTransferFunction("RTData")
with open("/tmp/Blot.xml", "r") as f:
data = f.read()
lut.ApplyColorMap(data)
On Wed, Jan 7, 2015 at 3:34 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> Ping?
>
>
>
>
>
>
>
> *From:* ParaView [mailto:paraview-bounces at paraview.org] *On Behalf Of *Scott,
> W Alan
> *Sent:* Tuesday, December 23, 2014 10:54 AM
> *To:* Utkarsh Ayachit
> *Cc:* Mauldin, Jeffrey A.; paraview at paraview.org
> *Subject:* Re: [Paraview] [EXTERNAL] Re: Trace recorder missing color
> preset changes
>
>
>
> Correct, the user has a specific XML file / block of code he wants to
> load. He is working on a car engine, with a few hundred blocks. He is
> coloring the car engine by material type ? aluminum, steel, rubber, copper,
> etc.
>
>
>
> Alan
>
>
>
> *From:* Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com
> <utkarsh.ayachit at kitware.com>]
> *Sent:* Tuesday, December 23, 2014 8:35 AM
> *To:* Scott, W Alan
> *Cc:* paraview at paraview.org; Mauldin, Jeffrey A.
> *Subject:* [EXTERNAL] Re: [Paraview] Trace recorder missing color preset
> changes
>
>
>
> Alan,
>
>
>
> What does your user want to do exactly? Does he have a color XML that he
> wants to load?
>
>
>
> On Mon, Dec 22, 2014 at 9:38 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>
> There is an issue with the trace recorder missing color preset changes. I
> wrote up a bug here: http://www.paraview.org/Bug/view.php?id=15116.
> However, I need the python for a user so that he can manually edit the
> trace script and change color presets. Does anyone either know the python
> I need, or where to find it?
>
>
>
> Thanks,
>
>
>
> Alan
>
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
>
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From wascott at sandia.gov Fri Jan 9 14:58:55 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Fri, 9 Jan 2015 19:58:55 +0000
Subject: [Paraview] [EXTERNAL] Re: Trace recorder missing color preset
changes
In-Reply-To: <CADHSJjAA11aj15VchFHFG5kNRTws7LpwwddwSRvELVn+DQS90A@mail.gmail.com>
References: <d13e0c0f5d344176a00b484f04c2378b@ES05AMSNLNT.srn.sandia.gov>
<CADHSJjCsQWfXwTfdVcW0A_CyQWMkW+KSAsbQx6=a4eqKzBEMJQ@mail.gmail.com>
<e2f9662b0b2e44aca2d6db9c631a8b84@ES05AMSNLNT.srn.sandia.gov>
<75f17d40903d493b97ac20c7b18aa283@ES05AMSNLNT.srn.sandia.gov>
<CADHSJjAA11aj15VchFHFG5kNRTws7LpwwddwSRvELVn+DQS90A@mail.gmail.com>
Message-ID: <757b767f7753432492b721cfaa81a2d5@ES05AMSNLNT.srn.sandia.gov>
Thanks as always!
Alan
From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
Sent: Friday, January 09, 2015 12:58 PM
To: Scott, W Alan
Cc: Mauldin, Jeffrey A.; paraview at paraview.org
Subject: Re: [Paraview] [EXTERNAL] Re: Trace recorder missing color preset changes
Alan,
Here;s an example to load a color map XML
lut = GetColorTransferFunction("RTData")
with open("/tmp/Blot.xml", "r") as f:
data = f.read()
lut.ApplyColorMap(data)
On Wed, Jan 7, 2015 at 3:34 PM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov>> wrote:
Ping?
From: ParaView [mailto:paraview-bounces at paraview.org<mailto:paraview-bounces at paraview.org>] On Behalf Of Scott, W Alan
Sent: Tuesday, December 23, 2014 10:54 AM
To: Utkarsh Ayachit
Cc: Mauldin, Jeffrey A.; paraview at paraview.org<mailto:paraview at paraview.org>
Subject: Re: [Paraview] [EXTERNAL] Re: Trace recorder missing color preset changes
Correct, the user has a specific XML file / block of code he wants to load. He is working on a car engine, with a few hundred blocks. He is coloring the car engine by material type ? aluminum, steel, rubber, copper, etc.
Alan
From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
Sent: Tuesday, December 23, 2014 8:35 AM
To: Scott, W Alan
Cc: paraview at paraview.org<mailto:paraview at paraview.org>; Mauldin, Jeffrey A.
Subject: [EXTERNAL] Re: [Paraview] Trace recorder missing color preset changes
Alan,
What does your user want to do exactly? Does he have a color XML that he wants to load?
On Mon, Dec 22, 2014 at 9:38 PM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov>> wrote:
There is an issue with the trace recorder missing color preset changes. I wrote up a bug here: http://www.paraview.org/Bug/view.php?id=15116. However, I need the python for a user so that he can manually edit the trace script and change color presets. Does anyone either know the python I need, or where to find it?
Thanks,
Alan
_______________________________________________
Powered by www.kitware.com<http://www.kitware.com>
Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
Follow this link to subscribe/unsubscribe:
http://public.kitware.com/mailman/listinfo/paraview
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From jeffrey.c.becker at nasa.gov Fri Jan 9 15:46:01 2015
From: jeffrey.c.becker at nasa.gov (Jeff Becker)
Date: Fri, 9 Jan 2015 12:46:01 -0800
Subject: [Paraview] problem building ParaView Examples
Message-ID: <54B03E09.2060507@nasa.gov>
Almost there - make output below. Any ideas? Thanks.
-jeff
Scanning dependencies of target ParaViewExamples
[ 80%] Build examples as a separate project
Not searching for unused variables given on the command line.
Not searching for unused variables given on the command line.
Internal cmake changing into directory:
/u/wk/jcbecker/ParaView-build/Examples/All
======== CMake output ======
The C compiler identification is GNU 4.4.7
The CXX compiler identification is GNU 4.4.7
Check for working C compiler: /usr/bin/cc
Configuring
Check for working C compiler: /usr/bin/cc -- works
Detecting C compiler ABI info
Configuring
Detecting C compiler ABI info - done
Check for working CXX compiler: /usr/bin/c++
Configuring
Check for working CXX compiler: /usr/bin/c++ -- works
Detecting CXX compiler ABI info
Configuring
Detecting CXX compiler ABI info - done
Looking for Q_WS_X11
Configuring
Looking for Q_WS_X11 - found
Looking for Q_WS_WIN
Configuring
Looking for Q_WS_WIN - not found
Looking for Q_WS_QWS
Configuring
Looking for Q_WS_QWS - not found
Looking for Q_WS_MAC
Configuring
Looking for Q_WS_MAC - not found
Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version "4.8.6")
Configuring
Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version "4.8.6")
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring done
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating done
Build files have been written to: /u/wk/jcbecker/ParaView-build/Examples/All
Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version "4.8.6")
Configuring
Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version "4.8.6")
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring
Configuring done
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating
Generating done
Build files have been written to: /u/wk/jcbecker/ParaView-build/Examples/All
======== End CMake output ======
Change Dir: /u/wk/jcbecker/ParaView-build/Examples/All
Run Build Command:/usr/bin/gmake
gmake[3]: Entering directory `/u/wk/jcbecker/ParaView-build/Examples/All'
gmake[4]: Entering directory `/u/wk/jcbecker/ParaView-build/Examples/All'
gmake[5]: Entering directory `/u/wk/jcbecker/ParaView-build/Examples/All'
[ 1%] Generating Documentation HTMLs from xmls
Processing wiki sources
Processing wiki filters
Processing wiki writers
Processing wiki readers
[ 1%] Compiling Qt help project SMMyElevation.qhp
Building up file structure...
Insert custom filters...
Insert help data for filter section (1 of 1)...
Insert files...
Warning: The file
/u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.css does
not exist! Skipping it.
Warning: The file
/u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.png does
not exist! Skipping it.
Warning: The file
/u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.jpg does
not exist! Skipping it.
Insert contents...
Insert indices...
Documentation successfully generated.
[ 2%] Generating SMMyElevation_doc.h
-- Generate module: SMMyElevation
gmake[5]: *** No rule to make target
`/u/wk/jcbecker/ParaView-build/bin/vtkWrapClientServer-pv4.3', needed by
`Plugins/Filter/vtkMyElevationFilterClientServer.cxx'. Stop.
gmake[5]: Leaving directory `/u/wk/jcbecker/ParaView-build/Examples/All'
gmake[4]: *** [Plugins/Filter/CMakeFiles/SMMyElevation.dir/all] Error 2
gmake[4]: Leaving directory `/u/wk/jcbecker/ParaView-build/Examples/All'
gmake[3]: *** [all] Error 2
gmake[3]: Leaving directory `/u/wk/jcbecker/ParaView-build/Examples/All'
make[2]: *** [ParaViewExamples.done] Error 1
make[1]: *** [CMakeFiles/ParaViewExamples.dir/all] Error 2
make: *** [all] Error 2
From wascott at sandia.gov Fri Jan 9 16:05:07 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Fri, 9 Jan 2015 21:05:07 +0000
Subject: [Paraview] [EXTERNAL] paraview cmake can't find proper qt
In-Reply-To: <54B0171D.3010809@nasa.gov>
References: <54B0171D.3010809@nasa.gov>
Message-ID: <9036dcc3a38844fda1128993b334bbcc@ES05AMSNLNT.srn.sandia.gov>
Jeff,
I probably hit Qt with too big of a hammer, but try the following (Python, but you get the idea).
I believe that the most important single line below is setting the MOC executable.
Alan
'-DQT_INCLUDE_DIR:PATH='+qtInstallDir+'/include '+\
'-DQT_MOC_EXECUTABLE:FILEPATH='+qtInstallDir+'/bin/moc ' +\
'-DQT_QMAKE_EXECUTABLE:FILEPATH='+qtInstallDir+'/bin/qmake ' +\
'-DQT_UIC_EXECUTABLE:FILEPATH='+qtInstallDir+'/bin/uic '
# During build, we are having issues linking to Qt - specifically the
# libQtXml.so library. Let's add the Qt library path to LD_LIBRARY_PATH.
path = os.environ.get('LD_LIBRARY_PATH')
os.environ['LD_LIBRARY_PATH']=qtInstallDir+'/lib/:'+path
-----Original Message-----
From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Jeff Becker
Sent: Friday, January 09, 2015 11:00 AM
To: paraview at paraview.org
Subject: [EXTERNAL] [Paraview] paraview cmake can't find proper qt
Hi. My initial run of ccmake complained that my distro's qt was too old, so I downloaded and built/installed a supported version in /usr/local/Trolltech/Qt-4.8.6. Thus I set:
//Where can the qmake-qt4 library be found QT_QMAKE_EXECUTABLE:FILEPATH=/usr/local/Trolltech/Qt-4.8.6/bin/qmake
However, even though ccmake completes (allowing the g key to be activated), the qt libraries/executables listed in CMakeCache.txt are all from the distro's versions (in /usr/lib64/qt4). E.g.,
//Path to a library.
QT_CUSTOMWIDGETPLUGIN_PLUGIN_RELEASE:FILEPATH=/usr/lib64/qt4/plugins/designer/libcustomwidgetplugin.so
//Path to a program.
QT_DBUSCPP2XML_EXECUTABLE:FILEPATH=/usr/lib64/qt4/bin/qdbuscpp2xml
Is there a QTHOME or similar variable I need to set to get the right libraries/executables? Thanks.
-jeff
_______________________________________________
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From omid.mahabadi at geomechanica.com Fri Jan 9 16:22:33 2015
From: omid.mahabadi at geomechanica.com (Omid Mahabadi)
Date: Fri, 09 Jan 2015 16:22:33 -0500
Subject: [Paraview] Programmable filter,
looping over time steps and reimporting inputs
In-Reply-To: <CADHSJjCb9myU4MVqXheNurLWn3-V-MrGSFhtjZs6ZX1JXGQMsw@mail.gmail.com>
References: <5490AE69.3030506@geomechanica.com>
<CADHSJjCb9myU4MVqXheNurLWn3-V-MrGSFhtjZs6ZX1JXGQMsw@mail.gmail.com>
Message-ID: <54B04699.3010404@geomechanica.com>
Thanks Utkarsh for your reply. I've gone through the blog a few times
already but I still don't understand the whole procedure. I even tried
to just run the example in the blog in a Programmable Source but it
doesn't work ('No module named numpy_interface'). Part of the issue
could be that I still don't fully understand the RequestInformation,
RequestUpdateExtent, and RequestData bits of the filter.
The input data that I'm working on in the pipeline (vtk unstructured
grid) already have different time steps. How can I update the values of
the inputs for the different time steps?
Thank you,
Omid
On 14-12-16 05:26 PM, Utkarsh Ayachit wrote:
> Check this blog: http://www.kitware.com/blog/home/post/783
> It should give you information on what you need to put in the Scripts
> for various passes of the filter.
>
> Utkarsh
>
>
> On Tue, Dec 16, 2014 at 5:12 PM, Omid Mahabadi
> <omid.mahabadi at geomechanica.com
> <mailto:omid.mahabadi at geomechanica.com>> wrote:
>
> Hi,
> I'm writing a python script for the Programmable Filter of
> ParaView to do some analysis on my simulation results. The
> simulations results are transient and hence the analysis has to be
> done over time steps (perhaps similar to integrate over time
> filter). All bits of my script are working fine. However, after
> spending a considerable amount of time on fiddling with the
> script, googling, reading mailing lists and the VTK documentation,
> I haven't found a way to "loop over time steps AND update the
> input" from within the script. I can loop over time steps using:
>
> from vtk import vtkStreamingDemandDrivenPipeline
> for time in
> outInfo.Get(vtkStreamingDemandDrivenPipeline.TIME_STEPS()):
> #Perform some analysis, for instance subtracting value_v
> for this time from value_v at time zero...
>
> However, the input data is still from the time step where I first
> applied the script. Of course, when I animate the results, the
> inputs will be updated, but I will need to achieve the same
> results from within my script in the Programmable Filter dialogue.
>
> How can I update the inputs from within my for loop or how can I
> modify the for loop or my script to achieve that? Can Programmable
> Filter handle my situation? If not, what is the alternative?
>
> Many thanks,
> Omid
>
> _______________________________________________
> Powered by www.kitware.com <http://www.kitware.com>
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
--
Omid Mahabadi, Ph.D.
Geomechanica, Inc.
http://www.geomechanica.com/
Tel : +1-647-478-9767
Cell: +1-416-824-2408
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From wascott at sandia.gov Fri Jan 9 23:49:26 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Sat, 10 Jan 2015 04:49:26 +0000
Subject: [Paraview] [EXTERNAL] Relative frequencies in Histogram plots
In-Reply-To: <CACoCd8dask8qNs16Tift=DX+Vh9dVhwXsxxYfXjK_2Lx2LVLmg@mail.gmail.com>
References: <CACoCd8dask8qNs16Tift=DX+Vh9dVhwXsxxYfXjK_2Lx2LVLmg@mail.gmail.com>
Message-ID: <027a9de2e6fc427cae87ea34752a94e4@ES05AMSNLNT.srn.sandia.gov>
Ethan,
Pretty sure you didn?t get a reply. The simple answer is that it probably won?t work. Mind writing up a feature request? This is a pretty good idea.
Alan
From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Ethan Hereth
Sent: Wednesday, January 07, 2015 2:04 PM
To: paraview at paraview.org
Subject: [EXTERNAL] [Paraview] Relative frequencies in Histogram plots
Good afternoon and happy new year!
I have a colleague who would like to be able to plot the relative frequency of the histogram data instead of absolute bin count. I.e. instead of having the left axis say there are 100 things in bin one, he'd like for it to say that 5% of the things are in bin one.
Is this possible?
Thank you!
--
Ethan Alan Hereth
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From utkarsh.ayachit at kitware.com Sat Jan 10 19:39:15 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Sat, 10 Jan 2015 19:39:15 -0500
Subject: [Paraview] problem building ParaView Examples
In-Reply-To: <54B03E09.2060507@nasa.gov>
References: <54B03E09.2060507@nasa.gov>
Message-ID: <CADHSJjBmOMcLn9SbRTqSZNs83GhmnGGmg-L6zgk-=6BvUfHj-Q@mail.gmail.com>
Not sure what's the issue. I tested out in my build and seems to work as
expected. Mind attaching your CMakeCache.txt file? Did you by any chance
turn on PARAVIEW_USE_UNIFIED_BINDINGS cmake flag?
Utkarsh
On Fri, Jan 9, 2015 at 3:46 PM, Jeff Becker <jeffrey.c.becker at nasa.gov>
wrote:
> Almost there - make output below. Any ideas? Thanks.
>
> -jeff
>
> Scanning dependencies of target ParaViewExamples
> [ 80%] Build examples as a separate project
> Not searching for unused variables given on the command line.
> Not searching for unused variables given on the command line.
> Internal cmake changing into directory: /u/wk/jcbecker/ParaView-build/
> Examples/All
> ======== CMake output ======
> The C compiler identification is GNU 4.4.7
> The CXX compiler identification is GNU 4.4.7
> Check for working C compiler: /usr/bin/cc
> Configuring
> Check for working C compiler: /usr/bin/cc -- works
> Detecting C compiler ABI info
> Configuring
> Detecting C compiler ABI info - done
> Check for working CXX compiler: /usr/bin/c++
> Configuring
> Check for working CXX compiler: /usr/bin/c++ -- works
> Detecting CXX compiler ABI info
> Configuring
> Detecting CXX compiler ABI info - done
> Looking for Q_WS_X11
> Configuring
> Looking for Q_WS_X11 - found
> Looking for Q_WS_WIN
> Configuring
> Looking for Q_WS_WIN - not found
> Looking for Q_WS_QWS
> Configuring
> Looking for Q_WS_QWS - not found
> Looking for Q_WS_MAC
> Configuring
> Looking for Q_WS_MAC - not found
> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version "4.8.6")
> Configuring
> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version "4.8.6")
> Configuring
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> Configuring
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> Configuring done
> Generating
> Generating
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> Generating done
> Build files have been written to: /u/wk/jcbecker/ParaView-build/
> Examples/All
> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version "4.8.6")
> Configuring
> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version "4.8.6")
> Configuring
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> Configuring done
> Generating
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> Generating done
> Build files have been written to: /u/wk/jcbecker/ParaView-build/
> Examples/All
> ======== End CMake output ======
> Change Dir: /u/wk/jcbecker/ParaView-build/Examples/All
>
> Run Build Command:/usr/bin/gmake
> gmake[3]: Entering directory `/u/wk/jcbecker/ParaView-build/Examples/All'
> gmake[4]: Entering directory `/u/wk/jcbecker/ParaView-build/Examples/All'
> gmake[5]: Entering directory `/u/wk/jcbecker/ParaView-build/Examples/All'
> [ 1%] Generating Documentation HTMLs from xmls
> Processing wiki sources
> Processing wiki filters
> Processing wiki writers
> Processing wiki readers
> [ 1%] Compiling Qt help project SMMyElevation.qhp
> Building up file structure...
> Insert custom filters...
> Insert help data for filter section (1 of 1)...
> Insert files...
> Warning: The file /u/wk/jcbecker/ParaView-build/
> Examples/All/Plugins/Filter/doc/*.css does not exist! Skipping it.
> Warning: The file /u/wk/jcbecker/ParaView-build/
> Examples/All/Plugins/Filter/doc/*.png does not exist! Skipping it.
> Warning: The file /u/wk/jcbecker/ParaView-build/
> Examples/All/Plugins/Filter/doc/*.jpg does not exist! Skipping it.
> Insert contents...
> Insert indices...
> Documentation successfully generated.
> [ 2%] Generating SMMyElevation_doc.h
> -- Generate module: SMMyElevation
> gmake[5]: *** No rule to make target `/u/wk/jcbecker/ParaView-
> build/bin/vtkWrapClientServer-pv4.3', needed by `Plugins/Filter/
> vtkMyElevationFilterClientServer.cxx'. Stop.
> gmake[5]: Leaving directory `/u/wk/jcbecker/ParaView-build/Examples/All'
> gmake[4]: *** [Plugins/Filter/CMakeFiles/SMMyElevation.dir/all] Error 2
> gmake[4]: Leaving directory `/u/wk/jcbecker/ParaView-build/Examples/All'
> gmake[3]: *** [all] Error 2
> gmake[3]: Leaving directory `/u/wk/jcbecker/ParaView-build/Examples/All'
> make[2]: *** [ParaViewExamples.done] Error 1
> make[1]: *** [CMakeFiles/ParaViewExamples.dir/all] Error 2
> make: *** [all] Error 2
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/
> opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From burlen.loring at gmail.com Sun Jan 11 14:48:29 2015
From: burlen.loring at gmail.com (Burlen Loring)
Date: Sun, 11 Jan 2015 11:48:29 -0800
Subject: [Paraview] Python paraview.simple: Zoom To Data?
In-Reply-To: <loom.20150109T194901-160@post.gmane.org>
References: <CAK6Z60cjzMx+juFksXBuAt7S4L6m2qCiJ-F9+wfSctC8acmceQ@mail.gmail.com> <CAMetC=TP79TELr-FinMrZ=vO2FDyKXmc3g0VJbhK0oMCOSXcHA@mail.gmail.com>
<CAK6Z60f2vdyKnTwMeGosBsN+NCFMetkuSaiv5=5Gj7DWQ7C3zA@mail.gmail.com>
<4F6224A4.9060701@lbl.gov> <loom.20150109T194901-160@post.gmane.org>
Message-ID: <54B2D38D.1040604@gmail.com>
Hi Liam,
> On 1/9/2015 10:52 AM, Liam wrote:
>> Just one more question. How do you define: far = config.camFac
your question is a follow up to the script about automatically
positioning the camera when viewing 2d axis aligned image data from thread
> http://comments.gmane.org/gmane.comp.science.paraview.user/15091
in that post config.camFac was a variable for used for fine tuning the
camera position. It could be 1.0 to go with default, less than 1.0 to
move camera closer or greater than 1.0 to move the camera away.
Since I originally posted the script I had made improvements to it which
I'll paste below. To remind of the context of the script below: I have
2d axis aligned image data in the object named bovr. the script below
automatically positions the camera and sizes the view according to the
aspect ratio of the data. "config_camZoom" is a fine tuning parameter,
and is documented here
<http://www.vtk.org/doc/nightly/html/classvtkCamera.html#a64512cc87555856a84f6c7d00abe0da9>.
1.0 is the value to start with.
hope this helps
Burlen
# run the pipeline here to get the bounds
rep = Show(bovr)
rep.Representation = 'Outline'
Render()
bounds = bovr.GetDataInformation().GetBounds()
bounds_dx = fabs(bounds[1] - bounds[0])
bounds_dy = fabs(bounds[3] - bounds[2])
bounds_dz = fabs(bounds[5] - bounds[4])
bounds_cx = (bounds[0] + bounds[1])/2.0
bounds_cy = (bounds[2] + bounds[3])/2.0
bounds_cz = (bounds[4] + bounds[5])/2.0
if (bounds_dx == 0):
# yz
dimMode = 2
aspect = bounds_dz/bounds_dy
elif (bounds_dy == 0):
# xz
dimMode = 1
aspect = bounds_dz/bounds_dx
elif (bounds_dz == 0):
#xy
dimMode = 0
aspect = bounds_dy/bounds_dx
else:
#3d
dimMode = 3
aspect = 1.0 # TODO
# position the camera
camFar=1.0
if (dimMode == 0):
# xy
camUp = [0.0, 1.0, 0.0]
camDir = 2
pos = max(bounds_dx, bounds_dy)
camPos = [bounds_cx, bounds_cy, -pos*camFar]
camFoc = [bounds_cx, bounds_cy, bounds_cz]
elif (dimMode == 1):
# xz
camUp = [0.0, 0.0, 1.0]
camDir = 1
pos = max(bounds_dx, bounds_dz)
camPos = [bounds_cx, -pos*camFar, bounds_cz]
camFoc = [bounds_cx, bounds_cy, bounds_cz]
elif (dimMode == 2):
# yz
camUp = [0.0, 0.0, 1.0]
camDir = 0
pos = max(bounds_dy, bounds_dz)
camPos = [ pos*camFar, bounds_cy, bounds_cz]
camFoc = [bounds_cx, bounds_cy, bounds_cz]
else:
# 3d
print '3d cam position is yet TODO'
# configure the view
width = 1024
height = int(width*aspect)
view = GetRenderView()
view.CameraViewUp = camUp
view.CameraPosition = camPos
view.CameraFocalPoint = camFoc
view.UseOffscreenRenderingForScreenshots = 0
view.CenterAxesVisibility = 0
view.OrientationAxesVisibility = 0
view.ViewSize = [width, height]
Render()
view.ResetCamera()
# for fine tuning
config_camZoom = 1.0
cam = GetActiveCamera()
cam.Zoom(config_camZoom)
On 1/9/2015 10:52 AM, Liam wrote:
> Hey guys,
>
> Just one more question. How do you define:
>
> far = config.camFac
>
> I cannot find in the code neither config nor camFac variable, so anybody
> could explain me how to compute far variable?
>
> This code has helped me so much.
>
> Yhanks in advance,
>
> Liam
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
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From grothausmann.roman at mh-hannover.de Mon Jan 12 05:56:33 2015
From: grothausmann.roman at mh-hannover.de (Dr. Roman Grothausmann)
Date: Mon, 12 Jan 2015 11:56:33 +0100
Subject: [Paraview] making vtkGaussianSplatter multi-threaded
Message-ID: <54B3A861.6060805@mh-hannover.de>
Dear mailing list members,
Since I already started to create and use a modified version of
vtkGaussianSplatter I now wonder if it were possible to make vtkGaussianSplatter
run multi-threaded. I'd expect that this is possible if getting and setting
pixel values is thread-safe. In vtkGaussianSplatter pixel values are stored in a
vtkDoubleArray and read with GetValue and written with SetTuple. There is no
info in the docs whether SetTuple (in the way used) is thread-safe. Although
GetValue seems to exist, I cannot find any hint in the docs that vtkDoubleArray
offers this function, however a thread-safe version of GetTuple exists.
So is there any reason vtkGaussianSplatter cannot be made multi-threaded with VTK6?
I found vtkGaussianScalarSplatter in the MADAI Workbench
(https://github.com/MADAI/MADAIWorkbench/tree/71086409933f5c7dbb4ad56e1cd79939325ee7cd/Plugins/GaussianScalarSplatter)
which seems to be based on vtkGaussianSplatter and originally was multi-threaded
(https://github.com/MADAI/MADAIWorkbench/commit/8a6d9eba7a1cddeac38a9af03ef6c3dd197308d7).
As far as I understand the code, the output of that filter is different to that
of vtkGaussianSplatter, as setting the model bounds is disabled and the function
SetScalar is gone and replaced by vtkGaussianScalarSplatter_erf.
Are there any other derivatives of vtkGaussianSplatter that are multi-threaded
that I could use instead?
Thanks for any help or hints.
Roman
--
Dr. Roman Grothausmann
Tomographie und Digitale Bildverarbeitung
Tomography and Digital Image Analysis
Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
Medizinische Hochschule Hannover
Carl-Neuberg-Str. 1
D-30625 Hannover
Tel. +49 511 532-9574
From david.gobbi at gmail.com Mon Jan 12 08:55:33 2015
From: david.gobbi at gmail.com (David Gobbi)
Date: Mon, 12 Jan 2015 06:55:33 -0700
Subject: [Paraview] making vtkGaussianSplatter multi-threaded
In-Reply-To: <54B3A861.6060805@mh-hannover.de>
References: <54B3A861.6060805@mh-hannover.de>
Message-ID: <CANwS1=E4=JG97Zix4S-_ngY5hpLh0V81-JS=+9gT28Fqh3nVfA@mail.gmail.com>
On Mon, Jan 12, 2015 at 3:56 AM, Dr. Roman Grothausmann <
grothausmann.roman at mh-hannover.de> wrote:
> Dear mailing list members,
>
> Since I already started to create and use a modified version of
> vtkGaussianSplatter I now wonder if it were possible to make
> vtkGaussianSplatter run multi-threaded. I'd expect that this is possible if
> getting and setting pixel values is thread-safe. In vtkGaussianSplatter
> pixel values are stored in a vtkDoubleArray and read with GetValue and
> written with SetTuple. There is no info in the docs whether SetTuple (in
> the way used) is thread-safe. Although GetValue seems to exist, I cannot
> find any hint in the docs that vtkDoubleArray offers this function, however
> a thread-safe version of GetTuple exists.
> So is there any reason vtkGaussianSplatter cannot be made multi-threaded
> with VTK6?
>
The SetTuple/GetTuple methods don't lock the array, so they equivalent to
(but slower than) raw memory reads and writes. And writing memory is not
thread safe if threads can write to the same memory address or (depending
on alignment) to adjacent addresses.
For vtkGaussianSplatter, any performance gains that could be had by
multi-threading would depend on the threads all being able to write at the
same time, therefore any sort of "lock" would kill the performance by
essentially serializing the writes. Hence, in order for
vtkGaussianSplatter to be properly multi-threaded, each thread must write
to its own block of output memory. After the splatting is done these must
be composited together.
I wrote a multi-threaded splatting filter once (for ultrasound
reconstruction), and in that case I divided my input points such that each
thread would write to different (but adjacent) memory regions within the
output. It performed well but wasn't completely thread-safe, because it
was possible for memory collisions to occur on the border between the
regions.
In summary: properly multi-threading vtkGaussianSplatter would be a
moderately difficult task. I haven't heard of anyone who has done it yet.
- David
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From jfavre at cscs.ch Mon Jan 12 09:18:37 2015
From: jfavre at cscs.ch (Favre Jean)
Date: Mon, 12 Jan 2015 14:18:37 +0000
Subject: [Paraview] reading time series of PLY files
Message-ID: <0EB9B6375711A04B820E6B6F5CCA9F682AEC5A3D@MBX111.d.ethz.ch>
Hello List
I cannot find information about reading a collection of binary time-dependent PLY files. My files are numbered with leading zeroes and *.ply extension
the GUI shows me "filename-00*" but ParaView does not recognize the series as a time collection. It only shows the first file.
Converting to STL files enables time animation. Can the same not be enabled for PLY files?
TIA
-----------------
Jean
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From grothausmann.roman at mh-hannover.de Mon Jan 12 09:58:47 2015
From: grothausmann.roman at mh-hannover.de (Dr. Roman Grothausmann)
Date: Mon, 12 Jan 2015 15:58:47 +0100
Subject: [Paraview] making vtkGaussianSplatter multi-threaded
In-Reply-To: <CANwS1=E4=JG97Zix4S-_ngY5hpLh0V81-JS=+9gT28Fqh3nVfA@mail.gmail.com>
References: <54B3A861.6060805@mh-hannover.de>
<CANwS1=E4=JG97Zix4S-_ngY5hpLh0V81-JS=+9gT28Fqh3nVfA@mail.gmail.com>
Message-ID: <54B3E127.70000@mh-hannover.de>
Dear David,
Many thanks for Your reply and explanations.
On 12/01/15 14:55, David Gobbi wrote:
> On Mon, Jan 12, 2015 at 3:56 AM, Dr. Roman Grothausmann
> serializing the writes. Hence, in order for vtkGaussianSplatter to be properly
> multi-threaded, each thread must write to its own block of output memory. After
> the splatting is done these must be composited together.
So a simple way to make vtkGaussianSplatter multi-threaded would be to partition
the input points into n groups and run vtkGaussianSplatter on each group,
resulting in n fully sized outputs, which have to be combine together
afterwards. The problem is that this will need n times the memory.
> I wrote a multi-threaded splatting filter once (for ultrasound reconstruction),
> and in that case I divided my input points such that each thread would write to
> different (but adjacent) memory regions within the output. It performed well
> but wasn't completely thread-safe, because it was possible for memory collisions
> to occur on the border between the regions.
Would it help and be possible to only lock access in these border regions?
Many thanks again.
Roman
--
Dr. Roman Grothausmann
Tomographie und Digitale Bildverarbeitung
Tomography and Digital Image Analysis
Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
Medizinische Hochschule Hannover
Carl-Neuberg-Str. 1
D-30625 Hannover
Tel. +49 511 532-9574
From grothausmann.roman at mh-hannover.de Mon Jan 12 12:36:11 2015
From: grothausmann.roman at mh-hannover.de (Dr. Roman Grothausmann)
Date: Mon, 12 Jan 2015 18:36:11 +0100
Subject: [Paraview] realizing partial updates of filter-pipeline within a
paraview plugin
Message-ID: <54B4060B.20009@mh-hannover.de>
Dear mailing list members,
If a single paraview plugin consists of multiple connected vtk-fiters (like a
mini-pipeline) and Apply is clicked again after some of its parameters have been
changed in the Properties panel.
Is it possible to only cause updates to specific filters in this pipeline, i.e.
those for which e.g. a parameter was changed in the GUI?
Thanks for any help or hints.
Roman
--
Dr. Roman Grothausmann
Tomographie und Digitale Bildverarbeitung
Tomography and Digital Image Analysis
Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
Medizinische Hochschule Hannover
Carl-Neuberg-Str. 1
D-30625 Hannover
Tel. +49 511 532-9574
From jeffrey.c.becker at nasa.gov Mon Jan 12 13:47:16 2015
From: jeffrey.c.becker at nasa.gov (Jeff Becker)
Date: Mon, 12 Jan 2015 10:47:16 -0800
Subject: [Paraview] problem building ParaView Examples
In-Reply-To: <CADHSJjBmOMcLn9SbRTqSZNs83GhmnGGmg-L6zgk-=6BvUfHj-Q@mail.gmail.com>
References: <54B03E09.2060507@nasa.gov>
<CADHSJjBmOMcLn9SbRTqSZNs83GhmnGGmg-L6zgk-=6BvUfHj-Q@mail.gmail.com>
Message-ID: <54B416B4.8020208@nasa.gov>
On 01/10/2015 04:39 PM, Utkarsh Ayachit wrote:
> Not sure what's the issue. I tested out in my build and seems to work
> as expected. Mind attaching your CMakeCache.txt file? Did you by any
> chance turn on PARAVIEW_USE_UNIFIED_BINDINGS cmake flag?
Yes. I turned that off, and now it builds fine. Thanks.
-jeff
>
> Utkarsh
>
> On Fri, Jan 9, 2015 at 3:46 PM, Jeff Becker <jeffrey.c.becker at nasa.gov
> <mailto:jeffrey.c.becker at nasa.gov>> wrote:
>
> Almost there - make output below. Any ideas? Thanks.
>
> -jeff
>
> Scanning dependencies of target ParaViewExamples
> [ 80%] Build examples as a separate project
> Not searching for unused variables given on the command line.
> Not searching for unused variables given on the command line.
> Internal cmake changing into directory:
> /u/wk/jcbecker/ParaView-build/Examples/All
> ======== CMake output ======
> The C compiler identification is GNU 4.4.7
> The CXX compiler identification is GNU 4.4.7
> Check for working C compiler: /usr/bin/cc
> Configuring
> Check for working C compiler: /usr/bin/cc -- works
> Detecting C compiler ABI info
> Configuring
> Detecting C compiler ABI info - done
> Check for working CXX compiler: /usr/bin/c++
> Configuring
> Check for working CXX compiler: /usr/bin/c++ -- works
> Detecting CXX compiler ABI info
> Configuring
> Detecting CXX compiler ABI info - done
> Looking for Q_WS_X11
> Configuring
> Looking for Q_WS_X11 - found
> Looking for Q_WS_WIN
> Configuring
> Looking for Q_WS_WIN - not found
> Looking for Q_WS_QWS
> Configuring
> Looking for Q_WS_QWS - not found
> Looking for Q_WS_MAC
> Configuring
> Looking for Q_WS_MAC - not found
> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
> "4.8.6")
> Configuring
> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
> "4.8.6")
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring done
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating done
> Build files have been written to:
> /u/wk/jcbecker/ParaView-build/Examples/All
> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
> "4.8.6")
> Configuring
> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
> "4.8.6")
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
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> Configuring
> Configuring
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> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring done
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating done
> Build files have been written to:
> /u/wk/jcbecker/ParaView-build/Examples/All
> ======== End CMake output ======
> Change Dir: /u/wk/jcbecker/ParaView-build/Examples/All
>
> Run Build Command:/usr/bin/gmake
> gmake[3]: Entering directory
> `/u/wk/jcbecker/ParaView-build/Examples/All'
> gmake[4]: Entering directory
> `/u/wk/jcbecker/ParaView-build/Examples/All'
> gmake[5]: Entering directory
> `/u/wk/jcbecker/ParaView-build/Examples/All'
> [ 1%] Generating Documentation HTMLs from xmls
> Processing wiki sources
> Processing wiki filters
> Processing wiki writers
> Processing wiki readers
> [ 1%] Compiling Qt help project SMMyElevation.qhp
> Building up file structure...
> Insert custom filters...
> Insert help data for filter section (1 of 1)...
> Insert files...
> Warning: The file
> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.css does
> not exist! Skipping it.
> Warning: The file
> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.png does
> not exist! Skipping it.
> Warning: The file
> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.jpg does
> not exist! Skipping it.
> Insert contents...
> Insert indices...
> Documentation successfully generated.
> [ 2%] Generating SMMyElevation_doc.h
> -- Generate module: SMMyElevation
> gmake[5]: *** No rule to make target
> `/u/wk/jcbecker/ParaView-build/bin/vtkWrapClientServer-pv4.3',
> needed by `Plugins/Filter/vtkMyElevationFilterClientServer.cxx'. Stop.
> gmake[5]: Leaving directory
> `/u/wk/jcbecker/ParaView-build/Examples/All'
> gmake[4]: *** [Plugins/Filter/CMakeFiles/SMMyElevation.dir/all]
> Error 2
> gmake[4]: Leaving directory
> `/u/wk/jcbecker/ParaView-build/Examples/All'
> gmake[3]: *** [all] Error 2
> gmake[3]: Leaving directory
> `/u/wk/jcbecker/ParaView-build/Examples/All'
> make[2]: *** [ParaViewExamples.done] Error 1
> make[1]: *** [CMakeFiles/ParaViewExamples.dir/all] Error 2
> make: *** [all] Error 2
>
> _______________________________________________
> Powered by www.kitware.com <http://www.kitware.com>
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From jeffrey.c.becker at nasa.gov Mon Jan 12 14:37:04 2015
From: jeffrey.c.becker at nasa.gov (Jeff Becker)
Date: Mon, 12 Jan 2015 11:37:04 -0800
Subject: [Paraview] problem building ParaView Examples
In-Reply-To: <54B416B4.8020208@nasa.gov>
References: <54B03E09.2060507@nasa.gov>
<CADHSJjBmOMcLn9SbRTqSZNs83GhmnGGmg-L6zgk-=6BvUfHj-Q@mail.gmail.com>
<54B416B4.8020208@nasa.gov>
Message-ID: <54B42260.4040501@nasa.gov>
On 01/12/2015 10:47 AM, Jeff Becker wrote:
> On 01/10/2015 04:39 PM, Utkarsh Ayachit wrote:
>> Not sure what's the issue. I tested out in my build and seems to work
>> as expected. Mind attaching your CMakeCache.txt file? Did you by any
>> chance turn on PARAVIEW_USE_UNIFIED_BINDINGS cmake flag?
>
> Yes. I turned that off, and now it builds fine. Thanks.
I tried 'make test' and got:
97% tests passed, 47 tests failed out of 1499
Failed tests listed below. Do I need to worry about these, and if so,
how to fix?
Thanks.
-jeff
The following tests FAILED:
1 - pv.TestDevelopmentInstall (Failed)
73 - vtkPVVTKExtensionsDefault-HeaderTest (Failed)
688 - vtkIONetCDFPython-NetCDFCF2DBounds (Failed)
779 - vtkPVServerManagerDefaultPython-MultiView (Failed)
786 - vtkPVServerManagerDefaultPython-SymmetricMultiView (Failed)
1026 - vtkRenderingVolumeCxx-TestGPUVolumeRayCastMapperWindowLevel
(Failed)
1103 - pv.FileSeries (Failed)
1104 - pv.HistogramSelection (Failed)
1119 - pv.FindDataDialog (Failed)
1136 - pv.AnimatePipelineTime (Failed)
1140 - pv.CameraLink (Failed)
1142 - pv.CheckableHeader (Failed)
1165 - pv.FFTOverTime (Failed)
1178 - pv.NormalGlyphs (Failed)
1186 - pv.PlotOverTimeAutoApply (Failed)
1211 - pv.TemporalInterpolator (Failed)
1218 - pv.UndoRedo2 (Failed)
1230 - pv.SelectionLabels (Failed)
1234 - pv.TraceSupplementalProxiesFully (Failed)
1252 - pvcs.CameraLink (Failed)
1254 - pvcs.CheckableHeader (Failed)
1275 - pvcs.FFTOverTime (Failed)
1279 - pvcs.ImageVolumeRendering (Failed)
1293 - pvcs.PlotOverTimeAutoApply (Failed)
1301 - pvcs.PropertyLink (Failed)
1317 - pvcs.TensorGlyph (Failed)
1318 - pvcs.TemporalInterpolator (Failed)
1325 - pvcs.UndoRedo2 (Failed)
1340 - pvcs.TraceSupplementalProxiesFully (Failed)
1346 - pvcs.HistogramSelection (Failed)
1351 - pvcs.NonlinearSubdivisionDisplay (Failed)
1360 - pvcs.FindDataDialog (Failed)
1376 - pvcrs.CameraLink (Failed)
1378 - pvcrs.CheckableHeader (Failed)
1384 - pvcrs.ComparativeVisPanel (Failed)
1415 - pvcrs.PropertyLink (Failed)
1418 - pvcrs.RepresentationSelector (Failed)
1420 - pvcrs.SaveCSV (Failed)
1422 - pvcrs.SimpleInteraction (Failed)
1424 - pvcrs.SliceAlongPolyline (Failed)
1426 - pvcrs.SpreadSheet2 (Failed)
1430 - pvcrs.TabbedViews (Failed)
1432 - pvcrs.TemporalInterpolator (Failed)
1439 - pvcrs.UndoRedo2 (Failed)
1453 - pvcrs.TraceSupplementalProxiesFully (Failed)
1458 - pvcrs.HistogramSelection (Failed)
1469 - pvcrs.FindDataDialog (Failed)
Errors while running CTest
make: *** [test] Error 8
>
> -jeff
>
>>
>> Utkarsh
>>
>> On Fri, Jan 9, 2015 at 3:46 PM, Jeff Becker
>> <jeffrey.c.becker at nasa.gov <mailto:jeffrey.c.becker at nasa.gov>> wrote:
>>
>> Almost there - make output below. Any ideas? Thanks.
>>
>> -jeff
>>
>> Scanning dependencies of target ParaViewExamples
>> [ 80%] Build examples as a separate project
>> Not searching for unused variables given on the command line.
>> Not searching for unused variables given on the command line.
>> Internal cmake changing into directory:
>> /u/wk/jcbecker/ParaView-build/Examples/All
>> ======== CMake output ======
>> The C compiler identification is GNU 4.4.7
>> The CXX compiler identification is GNU 4.4.7
>> Check for working C compiler: /usr/bin/cc
>> Configuring
>> Check for working C compiler: /usr/bin/cc -- works
>> Detecting C compiler ABI info
>> Configuring
>> Detecting C compiler ABI info - done
>> Check for working CXX compiler: /usr/bin/c++
>> Configuring
>> Check for working CXX compiler: /usr/bin/c++ -- works
>> Detecting CXX compiler ABI info
>> Configuring
>> Detecting CXX compiler ABI info - done
>> Looking for Q_WS_X11
>> Configuring
>> Looking for Q_WS_X11 - found
>> Looking for Q_WS_WIN
>> Configuring
>> Looking for Q_WS_WIN - not found
>> Looking for Q_WS_QWS
>> Configuring
>> Looking for Q_WS_QWS - not found
>> Looking for Q_WS_MAC
>> Configuring
>> Looking for Q_WS_MAC - not found
>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>> "4.8.6")
>> Configuring
>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>> "4.8.6")
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring done
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating done
>> Build files have been written to:
>> /u/wk/jcbecker/ParaView-build/Examples/All
>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>> "4.8.6")
>> Configuring
>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>> "4.8.6")
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
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>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring done
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating done
>> Build files have been written to:
>> /u/wk/jcbecker/ParaView-build/Examples/All
>> ======== End CMake output ======
>> Change Dir: /u/wk/jcbecker/ParaView-build/Examples/All
>>
>> Run Build Command:/usr/bin/gmake
>> gmake[3]: Entering directory
>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>> gmake[4]: Entering directory
>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>> gmake[5]: Entering directory
>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>> [ 1%] Generating Documentation HTMLs from xmls
>> Processing wiki sources
>> Processing wiki filters
>> Processing wiki writers
>> Processing wiki readers
>> [ 1%] Compiling Qt help project SMMyElevation.qhp
>> Building up file structure...
>> Insert custom filters...
>> Insert help data for filter section (1 of 1)...
>> Insert files...
>> Warning: The file
>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.css
>> does not exist! Skipping it.
>> Warning: The file
>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.png
>> does not exist! Skipping it.
>> Warning: The file
>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.jpg
>> does not exist! Skipping it.
>> Insert contents...
>> Insert indices...
>> Documentation successfully generated.
>> [ 2%] Generating SMMyElevation_doc.h
>> -- Generate module: SMMyElevation
>> gmake[5]: *** No rule to make target
>> `/u/wk/jcbecker/ParaView-build/bin/vtkWrapClientServer-pv4.3',
>> needed by `Plugins/Filter/vtkMyElevationFilterClientServer.cxx'.
>> Stop.
>> gmake[5]: Leaving directory
>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>> gmake[4]: *** [Plugins/Filter/CMakeFiles/SMMyElevation.dir/all]
>> Error 2
>> gmake[4]: Leaving directory
>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>> gmake[3]: *** [all] Error 2
>> gmake[3]: Leaving directory
>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>> make[2]: *** [ParaViewExamples.done] Error 1
>> make[1]: *** [CMakeFiles/ParaViewExamples.dir/all] Error 2
>> make: *** [all] Error 2
>>
>> _______________________________________________
>> Powered by www.kitware.com <http://www.kitware.com>
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>
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From utkarsh.ayachit at kitware.com Mon Jan 12 14:39:04 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Mon, 12 Jan 2015 11:39:04 -0800
Subject: [Paraview] problem building ParaView Examples
In-Reply-To: <54B42260.4040501@nasa.gov>
References: <54B03E09.2060507@nasa.gov>
<CADHSJjBmOMcLn9SbRTqSZNs83GhmnGGmg-L6zgk-=6BvUfHj-Q@mail.gmail.com>
<54B416B4.8020208@nasa.gov> <54B42260.4040501@nasa.gov>
Message-ID: <CADHSJjC1g_ybTTYf0euHYP+DbsWcQNVFUPnwAFAL4sVavg+a1g@mail.gmail.com>
Mind doing a "ctest -D Experimental"? That'll submit the test results
to the ParaView dashboard [1] and will provide use more information as
to why those tests failed.
[1] https://open.cdash.org/index.php?project=ParaView
On Mon, Jan 12, 2015 at 11:37 AM, Jeff Becker <jeffrey.c.becker at nasa.gov> wrote:
> On 01/12/2015 10:47 AM, Jeff Becker wrote:
>
> On 01/10/2015 04:39 PM, Utkarsh Ayachit wrote:
>
> Not sure what's the issue. I tested out in my build and seems to work as
> expected. Mind attaching your CMakeCache.txt file? Did you by any chance
> turn on PARAVIEW_USE_UNIFIED_BINDINGS cmake flag?
>
>
> Yes. I turned that off, and now it builds fine. Thanks.
>
>
> I tried 'make test' and got:
>
> 97% tests passed, 47 tests failed out of 1499
>
> Failed tests listed below. Do I need to worry about these, and if so, how to
> fix?
>
> Thanks.
>
> -jeff
>
> The following tests FAILED:
> 1 - pv.TestDevelopmentInstall (Failed)
> 73 - vtkPVVTKExtensionsDefault-HeaderTest (Failed)
> 688 - vtkIONetCDFPython-NetCDFCF2DBounds (Failed)
> 779 - vtkPVServerManagerDefaultPython-MultiView (Failed)
> 786 - vtkPVServerManagerDefaultPython-SymmetricMultiView (Failed)
> 1026 - vtkRenderingVolumeCxx-TestGPUVolumeRayCastMapperWindowLevel
> (Failed)
> 1103 - pv.FileSeries (Failed)
> 1104 - pv.HistogramSelection (Failed)
> 1119 - pv.FindDataDialog (Failed)
> 1136 - pv.AnimatePipelineTime (Failed)
> 1140 - pv.CameraLink (Failed)
> 1142 - pv.CheckableHeader (Failed)
> 1165 - pv.FFTOverTime (Failed)
> 1178 - pv.NormalGlyphs (Failed)
> 1186 - pv.PlotOverTimeAutoApply (Failed)
> 1211 - pv.TemporalInterpolator (Failed)
> 1218 - pv.UndoRedo2 (Failed)
> 1230 - pv.SelectionLabels (Failed)
> 1234 - pv.TraceSupplementalProxiesFully (Failed)
> 1252 - pvcs.CameraLink (Failed)
> 1254 - pvcs.CheckableHeader (Failed)
> 1275 - pvcs.FFTOverTime (Failed)
> 1279 - pvcs.ImageVolumeRendering (Failed)
> 1293 - pvcs.PlotOverTimeAutoApply (Failed)
> 1301 - pvcs.PropertyLink (Failed)
> 1317 - pvcs.TensorGlyph (Failed)
> 1318 - pvcs.TemporalInterpolator (Failed)
> 1325 - pvcs.UndoRedo2 (Failed)
> 1340 - pvcs.TraceSupplementalProxiesFully (Failed)
> 1346 - pvcs.HistogramSelection (Failed)
> 1351 - pvcs.NonlinearSubdivisionDisplay (Failed)
> 1360 - pvcs.FindDataDialog (Failed)
> 1376 - pvcrs.CameraLink (Failed)
> 1378 - pvcrs.CheckableHeader (Failed)
> 1384 - pvcrs.ComparativeVisPanel (Failed)
> 1415 - pvcrs.PropertyLink (Failed)
> 1418 - pvcrs.RepresentationSelector (Failed)
> 1420 - pvcrs.SaveCSV (Failed)
> 1422 - pvcrs.SimpleInteraction (Failed)
> 1424 - pvcrs.SliceAlongPolyline (Failed)
> 1426 - pvcrs.SpreadSheet2 (Failed)
> 1430 - pvcrs.TabbedViews (Failed)
> 1432 - pvcrs.TemporalInterpolator (Failed)
> 1439 - pvcrs.UndoRedo2 (Failed)
> 1453 - pvcrs.TraceSupplementalProxiesFully (Failed)
> 1458 - pvcrs.HistogramSelection (Failed)
> 1469 - pvcrs.FindDataDialog (Failed)
> Errors while running CTest
> make: *** [test] Error 8
>
>
>
>
> -jeff
>
>
> Utkarsh
>
> On Fri, Jan 9, 2015 at 3:46 PM, Jeff Becker <jeffrey.c.becker at nasa.gov>
> wrote:
>>
>> Almost there - make output below. Any ideas? Thanks.
>>
>> -jeff
>>
>> Scanning dependencies of target ParaViewExamples
>> [ 80%] Build examples as a separate project
>> Not searching for unused variables given on the command line.
>> Not searching for unused variables given on the command line.
>> Internal cmake changing into directory:
>> /u/wk/jcbecker/ParaView-build/Examples/All
>> ======== CMake output ======
>> The C compiler identification is GNU 4.4.7
>> The CXX compiler identification is GNU 4.4.7
>> Check for working C compiler: /usr/bin/cc
>> Configuring
>> Check for working C compiler: /usr/bin/cc -- works
>> Detecting C compiler ABI info
>> Configuring
>> Detecting C compiler ABI info - done
>> Check for working CXX compiler: /usr/bin/c++
>> Configuring
>> Check for working CXX compiler: /usr/bin/c++ -- works
>> Detecting CXX compiler ABI info
>> Configuring
>> Detecting CXX compiler ABI info - done
>> Looking for Q_WS_X11
>> Configuring
>> Looking for Q_WS_X11 - found
>> Looking for Q_WS_WIN
>> Configuring
>> Looking for Q_WS_WIN - not found
>> Looking for Q_WS_QWS
>> Configuring
>> Looking for Q_WS_QWS - not found
>> Looking for Q_WS_MAC
>> Configuring
>> Looking for Q_WS_MAC - not found
>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version "4.8.6")
>> Configuring
>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version "4.8.6")
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring done
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating done
>> Build files have been written to:
>> /u/wk/jcbecker/ParaView-build/Examples/All
>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version "4.8.6")
>> Configuring
>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version "4.8.6")
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring done
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating
>> Generating done
>> Build files have been written to:
>> /u/wk/jcbecker/ParaView-build/Examples/All
>> ======== End CMake output ======
>> Change Dir: /u/wk/jcbecker/ParaView-build/Examples/All
>>
>> Run Build Command:/usr/bin/gmake
>> gmake[3]: Entering directory `/u/wk/jcbecker/ParaView-build/Examples/All'
>> gmake[4]: Entering directory `/u/wk/jcbecker/ParaView-build/Examples/All'
>> gmake[5]: Entering directory `/u/wk/jcbecker/ParaView-build/Examples/All'
>> [ 1%] Generating Documentation HTMLs from xmls
>> Processing wiki sources
>> Processing wiki filters
>> Processing wiki writers
>> Processing wiki readers
>> [ 1%] Compiling Qt help project SMMyElevation.qhp
>> Building up file structure...
>> Insert custom filters...
>> Insert help data for filter section (1 of 1)...
>> Insert files...
>> Warning: The file
>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.css does not
>> exist! Skipping it.
>> Warning: The file
>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.png does not
>> exist! Skipping it.
>> Warning: The file
>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.jpg does not
>> exist! Skipping it.
>> Insert contents...
>> Insert indices...
>> Documentation successfully generated.
>> [ 2%] Generating SMMyElevation_doc.h
>> -- Generate module: SMMyElevation
>> gmake[5]: *** No rule to make target
>> `/u/wk/jcbecker/ParaView-build/bin/vtkWrapClientServer-pv4.3', needed by
>> `Plugins/Filter/vtkMyElevationFilterClientServer.cxx'. Stop.
>> gmake[5]: Leaving directory `/u/wk/jcbecker/ParaView-build/Examples/All'
>> gmake[4]: *** [Plugins/Filter/CMakeFiles/SMMyElevation.dir/all] Error 2
>> gmake[4]: Leaving directory `/u/wk/jcbecker/ParaView-build/Examples/All'
>> gmake[3]: *** [all] Error 2
>> gmake[3]: Leaving directory `/u/wk/jcbecker/ParaView-build/Examples/All'
>> make[2]: *** [ParaViewExamples.done] Error 1
>> make[1]: *** [CMakeFiles/ParaViewExamples.dir/all] Error 2
>> make: *** [all] Error 2
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>
>
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
From jeffrey.c.becker at nasa.gov Mon Jan 12 16:28:51 2015
From: jeffrey.c.becker at nasa.gov (Jeff Becker)
Date: Mon, 12 Jan 2015 13:28:51 -0800
Subject: [Paraview] problem building ParaView Examples
In-Reply-To: <CADHSJjC1g_ybTTYf0euHYP+DbsWcQNVFUPnwAFAL4sVavg+a1g@mail.gmail.com>
References: <54B03E09.2060507@nasa.gov> <CADHSJjBmOMcLn9SbRTqSZNs83GhmnGGmg-L6zgk-=6BvUfHj-Q@mail.gmail.com> <54B416B4.8020208@nasa.gov> <54B42260.4040501@nasa.gov>
<CADHSJjC1g_ybTTYf0euHYP+DbsWcQNVFUPnwAFAL4sVavg+a1g@mail.gmail.com>
Message-ID: <54B43C93.2040001@nasa.gov>
On 01/12/2015 11:39 AM, Utkarsh Ayachit wrote:
> Mind doing a "ctest -D Experimental"? That'll submit the test results
> to the ParaView dashboard [1] and will provide use more information as
> to why those tests failed.
Done. 996 tests failed (see website below). Thanks.
-jeff
>
> [1] https://open.cdash.org/index.php?project=ParaView
>
> On Mon, Jan 12, 2015 at 11:37 AM, Jeff Becker <jeffrey.c.becker at nasa.gov> wrote:
>> On 01/12/2015 10:47 AM, Jeff Becker wrote:
>>
>> On 01/10/2015 04:39 PM, Utkarsh Ayachit wrote:
>>
>> Not sure what's the issue. I tested out in my build and seems to work as
>> expected. Mind attaching your CMakeCache.txt file? Did you by any chance
>> turn on PARAVIEW_USE_UNIFIED_BINDINGS cmake flag?
>>
>>
>> Yes. I turned that off, and now it builds fine. Thanks.
>>
>>
>> I tried 'make test' and got:
>>
>> 97% tests passed, 47 tests failed out of 1499
>>
>> Failed tests listed below. Do I need to worry about these, and if so, how to
>> fix?
>>
>> Thanks.
>>
>> -jeff
>>
>> The following tests FAILED:
>> 1 - pv.TestDevelopmentInstall (Failed)
>> 73 - vtkPVVTKExtensionsDefault-HeaderTest (Failed)
>> 688 - vtkIONetCDFPython-NetCDFCF2DBounds (Failed)
>> 779 - vtkPVServerManagerDefaultPython-MultiView (Failed)
>> 786 - vtkPVServerManagerDefaultPython-SymmetricMultiView (Failed)
>> 1026 - vtkRenderingVolumeCxx-TestGPUVolumeRayCastMapperWindowLevel
>> (Failed)
>> 1103 - pv.FileSeries (Failed)
>> 1104 - pv.HistogramSelection (Failed)
>> 1119 - pv.FindDataDialog (Failed)
>> 1136 - pv.AnimatePipelineTime (Failed)
>> 1140 - pv.CameraLink (Failed)
>> 1142 - pv.CheckableHeader (Failed)
>> 1165 - pv.FFTOverTime (Failed)
>> 1178 - pv.NormalGlyphs (Failed)
>> 1186 - pv.PlotOverTimeAutoApply (Failed)
>> 1211 - pv.TemporalInterpolator (Failed)
>> 1218 - pv.UndoRedo2 (Failed)
>> 1230 - pv.SelectionLabels (Failed)
>> 1234 - pv.TraceSupplementalProxiesFully (Failed)
>> 1252 - pvcs.CameraLink (Failed)
>> 1254 - pvcs.CheckableHeader (Failed)
>> 1275 - pvcs.FFTOverTime (Failed)
>> 1279 - pvcs.ImageVolumeRendering (Failed)
>> 1293 - pvcs.PlotOverTimeAutoApply (Failed)
>> 1301 - pvcs.PropertyLink (Failed)
>> 1317 - pvcs.TensorGlyph (Failed)
>> 1318 - pvcs.TemporalInterpolator (Failed)
>> 1325 - pvcs.UndoRedo2 (Failed)
>> 1340 - pvcs.TraceSupplementalProxiesFully (Failed)
>> 1346 - pvcs.HistogramSelection (Failed)
>> 1351 - pvcs.NonlinearSubdivisionDisplay (Failed)
>> 1360 - pvcs.FindDataDialog (Failed)
>> 1376 - pvcrs.CameraLink (Failed)
>> 1378 - pvcrs.CheckableHeader (Failed)
>> 1384 - pvcrs.ComparativeVisPanel (Failed)
>> 1415 - pvcrs.PropertyLink (Failed)
>> 1418 - pvcrs.RepresentationSelector (Failed)
>> 1420 - pvcrs.SaveCSV (Failed)
>> 1422 - pvcrs.SimpleInteraction (Failed)
>> 1424 - pvcrs.SliceAlongPolyline (Failed)
>> 1426 - pvcrs.SpreadSheet2 (Failed)
>> 1430 - pvcrs.TabbedViews (Failed)
>> 1432 - pvcrs.TemporalInterpolator (Failed)
>> 1439 - pvcrs.UndoRedo2 (Failed)
>> 1453 - pvcrs.TraceSupplementalProxiesFully (Failed)
>> 1458 - pvcrs.HistogramSelection (Failed)
>> 1469 - pvcrs.FindDataDialog (Failed)
>> Errors while running CTest
>> make: *** [test] Error 8
>>
>>
>>
>>
>> -jeff
>>
>>
>> Utkarsh
>>
>> On Fri, Jan 9, 2015 at 3:46 PM, Jeff Becker <jeffrey.c.becker at nasa.gov>
>> wrote:
>>> Almost there - make output below. Any ideas? Thanks.
>>>
>>> -jeff
>>>
>>> Scanning dependencies of target ParaViewExamples
>>> [ 80%] Build examples as a separate project
>>> Not searching for unused variables given on the command line.
>>> Not searching for unused variables given on the command line.
>>> Internal cmake changing into directory:
>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>> ======== CMake output ======
>>> The C compiler identification is GNU 4.4.7
>>> The CXX compiler identification is GNU 4.4.7
>>> Check for working C compiler: /usr/bin/cc
>>> Configuring
>>> Check for working C compiler: /usr/bin/cc -- works
>>> Detecting C compiler ABI info
>>> Configuring
>>> Detecting C compiler ABI info - done
>>> Check for working CXX compiler: /usr/bin/c++
>>> Configuring
>>> Check for working CXX compiler: /usr/bin/c++ -- works
>>> Detecting CXX compiler ABI info
>>> Configuring
>>> Detecting CXX compiler ABI info - done
>>> Looking for Q_WS_X11
>>> Configuring
>>> Looking for Q_WS_X11 - found
>>> Looking for Q_WS_WIN
>>> Configuring
>>> Looking for Q_WS_WIN - not found
>>> Looking for Q_WS_QWS
>>> Configuring
>>> Looking for Q_WS_QWS - not found
>>> Looking for Q_WS_MAC
>>> Configuring
>>> Looking for Q_WS_MAC - not found
>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version "4.8.6")
>>> Configuring
>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version "4.8.6")
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring done
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating done
>>> Build files have been written to:
>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version "4.8.6")
>>> Configuring
>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version "4.8.6")
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring done
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating done
>>> Build files have been written to:
>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>> ======== End CMake output ======
>>> Change Dir: /u/wk/jcbecker/ParaView-build/Examples/All
>>>
>>> Run Build Command:/usr/bin/gmake
>>> gmake[3]: Entering directory `/u/wk/jcbecker/ParaView-build/Examples/All'
>>> gmake[4]: Entering directory `/u/wk/jcbecker/ParaView-build/Examples/All'
>>> gmake[5]: Entering directory `/u/wk/jcbecker/ParaView-build/Examples/All'
>>> [ 1%] Generating Documentation HTMLs from xmls
>>> Processing wiki sources
>>> Processing wiki filters
>>> Processing wiki writers
>>> Processing wiki readers
>>> [ 1%] Compiling Qt help project SMMyElevation.qhp
>>> Building up file structure...
>>> Insert custom filters...
>>> Insert help data for filter section (1 of 1)...
>>> Insert files...
>>> Warning: The file
>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.css does not
>>> exist! Skipping it.
>>> Warning: The file
>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.png does not
>>> exist! Skipping it.
>>> Warning: The file
>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.jpg does not
>>> exist! Skipping it.
>>> Insert contents...
>>> Insert indices...
>>> Documentation successfully generated.
>>> [ 2%] Generating SMMyElevation_doc.h
>>> -- Generate module: SMMyElevation
>>> gmake[5]: *** No rule to make target
>>> `/u/wk/jcbecker/ParaView-build/bin/vtkWrapClientServer-pv4.3', needed by
>>> `Plugins/Filter/vtkMyElevationFilterClientServer.cxx'. Stop.
>>> gmake[5]: Leaving directory `/u/wk/jcbecker/ParaView-build/Examples/All'
>>> gmake[4]: *** [Plugins/Filter/CMakeFiles/SMMyElevation.dir/all] Error 2
>>> gmake[4]: Leaving directory `/u/wk/jcbecker/ParaView-build/Examples/All'
>>> gmake[3]: *** [all] Error 2
>>> gmake[3]: Leaving directory `/u/wk/jcbecker/ParaView-build/Examples/All'
>>> make[2]: *** [ParaViewExamples.done] Error 1
>>> make[1]: *** [CMakeFiles/ParaViewExamples.dir/all] Error 2
>>> make: *** [all] Error 2
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
From utkarsh.ayachit at kitware.com Mon Jan 12 16:38:28 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Mon, 12 Jan 2015 13:38:28 -0800
Subject: [Paraview] problem building ParaView Examples
In-Reply-To: <54B43C93.2040001@nasa.gov>
References: <54B03E09.2060507@nasa.gov>
<CADHSJjBmOMcLn9SbRTqSZNs83GhmnGGmg-L6zgk-=6BvUfHj-Q@mail.gmail.com>
<54B416B4.8020208@nasa.gov> <54B42260.4040501@nasa.gov>
<CADHSJjC1g_ybTTYf0euHYP+DbsWcQNVFUPnwAFAL4sVavg+a1g@mail.gmail.com>
<54B43C93.2040001@nasa.gov>
Message-ID: <CADHSJjA7E2iDA2x7a9+q52EHG4=MQy4-bfG_92dSBvdTTT=igw@mail.gmail.com>
That's more from before! :). Anything funky about the X configuration?
Looks like the framebuffer grabs end up capturing ghost images.
Utkarsh
On Mon, Jan 12, 2015 at 1:28 PM, Jeff Becker <jeffrey.c.becker at nasa.gov> wrote:
> On 01/12/2015 11:39 AM, Utkarsh Ayachit wrote:
>>
>> Mind doing a "ctest -D Experimental"? That'll submit the test results
>> to the ParaView dashboard [1] and will provide use more information as
>> to why those tests failed.
>
>
> Done. 996 tests failed (see website below). Thanks.
>
> -jeff
>
>>
>> [1] https://open.cdash.org/index.php?project=ParaView
>>
>> On Mon, Jan 12, 2015 at 11:37 AM, Jeff Becker <jeffrey.c.becker at nasa.gov>
>> wrote:
>>>
>>> On 01/12/2015 10:47 AM, Jeff Becker wrote:
>>>
>>> On 01/10/2015 04:39 PM, Utkarsh Ayachit wrote:
>>>
>>> Not sure what's the issue. I tested out in my build and seems to work as
>>> expected. Mind attaching your CMakeCache.txt file? Did you by any chance
>>> turn on PARAVIEW_USE_UNIFIED_BINDINGS cmake flag?
>>>
>>>
>>> Yes. I turned that off, and now it builds fine. Thanks.
>>>
>>>
>>> I tried 'make test' and got:
>>>
>>> 97% tests passed, 47 tests failed out of 1499
>>>
>>> Failed tests listed below. Do I need to worry about these, and if so, how
>>> to
>>> fix?
>>>
>>> Thanks.
>>>
>>> -jeff
>>>
>>> The following tests FAILED:
>>> 1 - pv.TestDevelopmentInstall (Failed)
>>> 73 - vtkPVVTKExtensionsDefault-HeaderTest (Failed)
>>> 688 - vtkIONetCDFPython-NetCDFCF2DBounds (Failed)
>>> 779 - vtkPVServerManagerDefaultPython-MultiView (Failed)
>>> 786 - vtkPVServerManagerDefaultPython-SymmetricMultiView (Failed)
>>> 1026 - vtkRenderingVolumeCxx-TestGPUVolumeRayCastMapperWindowLevel
>>> (Failed)
>>> 1103 - pv.FileSeries (Failed)
>>> 1104 - pv.HistogramSelection (Failed)
>>> 1119 - pv.FindDataDialog (Failed)
>>> 1136 - pv.AnimatePipelineTime (Failed)
>>> 1140 - pv.CameraLink (Failed)
>>> 1142 - pv.CheckableHeader (Failed)
>>> 1165 - pv.FFTOverTime (Failed)
>>> 1178 - pv.NormalGlyphs (Failed)
>>> 1186 - pv.PlotOverTimeAutoApply (Failed)
>>> 1211 - pv.TemporalInterpolator (Failed)
>>> 1218 - pv.UndoRedo2 (Failed)
>>> 1230 - pv.SelectionLabels (Failed)
>>> 1234 - pv.TraceSupplementalProxiesFully (Failed)
>>> 1252 - pvcs.CameraLink (Failed)
>>> 1254 - pvcs.CheckableHeader (Failed)
>>> 1275 - pvcs.FFTOverTime (Failed)
>>> 1279 - pvcs.ImageVolumeRendering (Failed)
>>> 1293 - pvcs.PlotOverTimeAutoApply (Failed)
>>> 1301 - pvcs.PropertyLink (Failed)
>>> 1317 - pvcs.TensorGlyph (Failed)
>>> 1318 - pvcs.TemporalInterpolator (Failed)
>>> 1325 - pvcs.UndoRedo2 (Failed)
>>> 1340 - pvcs.TraceSupplementalProxiesFully (Failed)
>>> 1346 - pvcs.HistogramSelection (Failed)
>>> 1351 - pvcs.NonlinearSubdivisionDisplay (Failed)
>>> 1360 - pvcs.FindDataDialog (Failed)
>>> 1376 - pvcrs.CameraLink (Failed)
>>> 1378 - pvcrs.CheckableHeader (Failed)
>>> 1384 - pvcrs.ComparativeVisPanel (Failed)
>>> 1415 - pvcrs.PropertyLink (Failed)
>>> 1418 - pvcrs.RepresentationSelector (Failed)
>>> 1420 - pvcrs.SaveCSV (Failed)
>>> 1422 - pvcrs.SimpleInteraction (Failed)
>>> 1424 - pvcrs.SliceAlongPolyline (Failed)
>>> 1426 - pvcrs.SpreadSheet2 (Failed)
>>> 1430 - pvcrs.TabbedViews (Failed)
>>> 1432 - pvcrs.TemporalInterpolator (Failed)
>>> 1439 - pvcrs.UndoRedo2 (Failed)
>>> 1453 - pvcrs.TraceSupplementalProxiesFully (Failed)
>>> 1458 - pvcrs.HistogramSelection (Failed)
>>> 1469 - pvcrs.FindDataDialog (Failed)
>>> Errors while running CTest
>>> make: *** [test] Error 8
>>>
>>>
>>>
>>>
>>> -jeff
>>>
>>>
>>> Utkarsh
>>>
>>> On Fri, Jan 9, 2015 at 3:46 PM, Jeff Becker <jeffrey.c.becker at nasa.gov>
>>> wrote:
>>>>
>>>> Almost there - make output below. Any ideas? Thanks.
>>>>
>>>> -jeff
>>>>
>>>> Scanning dependencies of target ParaViewExamples
>>>> [ 80%] Build examples as a separate project
>>>> Not searching for unused variables given on the command line.
>>>> Not searching for unused variables given on the command line.
>>>> Internal cmake changing into directory:
>>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>> ======== CMake output ======
>>>> The C compiler identification is GNU 4.4.7
>>>> The CXX compiler identification is GNU 4.4.7
>>>> Check for working C compiler: /usr/bin/cc
>>>> Configuring
>>>> Check for working C compiler: /usr/bin/cc -- works
>>>> Detecting C compiler ABI info
>>>> Configuring
>>>> Detecting C compiler ABI info - done
>>>> Check for working CXX compiler: /usr/bin/c++
>>>> Configuring
>>>> Check for working CXX compiler: /usr/bin/c++ -- works
>>>> Detecting CXX compiler ABI info
>>>> Configuring
>>>> Detecting CXX compiler ABI info - done
>>>> Looking for Q_WS_X11
>>>> Configuring
>>>> Looking for Q_WS_X11 - found
>>>> Looking for Q_WS_WIN
>>>> Configuring
>>>> Looking for Q_WS_WIN - not found
>>>> Looking for Q_WS_QWS
>>>> Configuring
>>>> Looking for Q_WS_QWS - not found
>>>> Looking for Q_WS_MAC
>>>> Configuring
>>>> Looking for Q_WS_MAC - not found
>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>> "4.8.6")
>>>> Configuring
>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>> "4.8.6")
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring done
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating done
>>>> Build files have been written to:
>>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>> "4.8.6")
>>>> Configuring
>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>> "4.8.6")
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring done
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating done
>>>> Build files have been written to:
>>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>> ======== End CMake output ======
>>>> Change Dir: /u/wk/jcbecker/ParaView-build/Examples/All
>>>>
>>>> Run Build Command:/usr/bin/gmake
>>>> gmake[3]: Entering directory
>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>> gmake[4]: Entering directory
>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>> gmake[5]: Entering directory
>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>> [ 1%] Generating Documentation HTMLs from xmls
>>>> Processing wiki sources
>>>> Processing wiki filters
>>>> Processing wiki writers
>>>> Processing wiki readers
>>>> [ 1%] Compiling Qt help project SMMyElevation.qhp
>>>> Building up file structure...
>>>> Insert custom filters...
>>>> Insert help data for filter section (1 of 1)...
>>>> Insert files...
>>>> Warning: The file
>>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.css does
>>>> not
>>>> exist! Skipping it.
>>>> Warning: The file
>>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.png does
>>>> not
>>>> exist! Skipping it.
>>>> Warning: The file
>>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.jpg does
>>>> not
>>>> exist! Skipping it.
>>>> Insert contents...
>>>> Insert indices...
>>>> Documentation successfully generated.
>>>> [ 2%] Generating SMMyElevation_doc.h
>>>> -- Generate module: SMMyElevation
>>>> gmake[5]: *** No rule to make target
>>>> `/u/wk/jcbecker/ParaView-build/bin/vtkWrapClientServer-pv4.3', needed by
>>>> `Plugins/Filter/vtkMyElevationFilterClientServer.cxx'. Stop.
>>>> gmake[5]: Leaving directory `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>> gmake[4]: *** [Plugins/Filter/CMakeFiles/SMMyElevation.dir/all] Error 2
>>>> gmake[4]: Leaving directory `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>> gmake[3]: *** [all] Error 2
>>>> gmake[3]: Leaving directory `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>> make[2]: *** [ParaViewExamples.done] Error 1
>>>> make[1]: *** [CMakeFiles/ParaViewExamples.dir/all] Error 2
>>>> make: *** [all] Error 2
>>>>
>>>> _______________________________________________
>>>> Powered by www.kitware.com
>>>>
>>>> Visit other Kitware open-source projects at
>>>> http://www.kitware.com/opensource/opensource.html
>>>>
>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>> http://paraview.org/Wiki/ParaView
>>>>
>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>
>>>> Follow this link to subscribe/unsubscribe:
>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>>>
>>>
>>>
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>
From david.thompson at kitware.com Mon Jan 12 16:41:39 2015
From: david.thompson at kitware.com (David Thompson)
Date: Mon, 12 Jan 2015 16:41:39 -0500
Subject: [Paraview] ANN: ParaView 4.3.0-RC1 now available for download
In-Reply-To: <CADHSJjDM1sJzJceDKjNyc7itMe6PyLPotnfaToxq2A_vGBntMA@mail.gmail.com>
References: <CADHSJjDM1sJzJceDKjNyc7itMe6PyLPotnfaToxq2A_vGBntMA@mail.gmail.com>
Message-ID: <186F8606-C75E-4BBD-80C0-647142D1940F@kitware.com>
Hi Utkarsh,
> To get the year started, we have the ParaView 4.3.0, Release Candidate 1 binaries available for download [1]. ...
Will it be possible to build branded ParaView applications from an *installed* version of ParaView 4.3 instead of requiring a build directory? I haven't been able to find a bug in the tracker for this.
Thanks,
David
From jeffrey.c.becker at nasa.gov Mon Jan 12 16:46:49 2015
From: jeffrey.c.becker at nasa.gov (Jeff Becker)
Date: Mon, 12 Jan 2015 13:46:49 -0800
Subject: [Paraview] problem building ParaView Examples
In-Reply-To: <CADHSJjA7E2iDA2x7a9+q52EHG4=MQy4-bfG_92dSBvdTTT=igw@mail.gmail.com>
References: <54B03E09.2060507@nasa.gov> <CADHSJjBmOMcLn9SbRTqSZNs83GhmnGGmg-L6zgk-=6BvUfHj-Q@mail.gmail.com> <54B416B4.8020208@nasa.gov> <54B42260.4040501@nasa.gov> <CADHSJjC1g_ybTTYf0euHYP+DbsWcQNVFUPnwAFAL4sVavg+a1g@mail.gmail.com> <54B43C93.2040001@nasa.gov>
<CADHSJjA7E2iDA2x7a9+q52EHG4=MQy4-bfG_92dSBvdTTT=igw@mail.gmail.com>
Message-ID: <54B440C9.1050708@nasa.gov>
On 01/12/2015 01:38 PM, Utkarsh Ayachit wrote:
> That's more from before! :).
I assume you meant more "than" before?
> Anything funky about the X configuration?
What should I look for?
> Looks like the framebuffer grabs end up capturing ghost images.
-jeff
>
> Utkarsh
>
> On Mon, Jan 12, 2015 at 1:28 PM, Jeff Becker <jeffrey.c.becker at nasa.gov> wrote:
>> On 01/12/2015 11:39 AM, Utkarsh Ayachit wrote:
>>> Mind doing a "ctest -D Experimental"? That'll submit the test results
>>> to the ParaView dashboard [1] and will provide use more information as
>>> to why those tests failed.
>>
>> Done. 996 tests failed (see website below). Thanks.
>>
>> -jeff
>>
>>> [1] https://open.cdash.org/index.php?project=ParaView
>>>
>>> On Mon, Jan 12, 2015 at 11:37 AM, Jeff Becker <jeffrey.c.becker at nasa.gov>
>>> wrote:
>>>> On 01/12/2015 10:47 AM, Jeff Becker wrote:
>>>>
>>>> On 01/10/2015 04:39 PM, Utkarsh Ayachit wrote:
>>>>
>>>> Not sure what's the issue. I tested out in my build and seems to work as
>>>> expected. Mind attaching your CMakeCache.txt file? Did you by any chance
>>>> turn on PARAVIEW_USE_UNIFIED_BINDINGS cmake flag?
>>>>
>>>>
>>>> Yes. I turned that off, and now it builds fine. Thanks.
>>>>
>>>>
>>>> I tried 'make test' and got:
>>>>
>>>> 97% tests passed, 47 tests failed out of 1499
>>>>
>>>> Failed tests listed below. Do I need to worry about these, and if so, how
>>>> to
>>>> fix?
>>>>
>>>> Thanks.
>>>>
>>>> -jeff
>>>>
>>>> The following tests FAILED:
>>>> 1 - pv.TestDevelopmentInstall (Failed)
>>>> 73 - vtkPVVTKExtensionsDefault-HeaderTest (Failed)
>>>> 688 - vtkIONetCDFPython-NetCDFCF2DBounds (Failed)
>>>> 779 - vtkPVServerManagerDefaultPython-MultiView (Failed)
>>>> 786 - vtkPVServerManagerDefaultPython-SymmetricMultiView (Failed)
>>>> 1026 - vtkRenderingVolumeCxx-TestGPUVolumeRayCastMapperWindowLevel
>>>> (Failed)
>>>> 1103 - pv.FileSeries (Failed)
>>>> 1104 - pv.HistogramSelection (Failed)
>>>> 1119 - pv.FindDataDialog (Failed)
>>>> 1136 - pv.AnimatePipelineTime (Failed)
>>>> 1140 - pv.CameraLink (Failed)
>>>> 1142 - pv.CheckableHeader (Failed)
>>>> 1165 - pv.FFTOverTime (Failed)
>>>> 1178 - pv.NormalGlyphs (Failed)
>>>> 1186 - pv.PlotOverTimeAutoApply (Failed)
>>>> 1211 - pv.TemporalInterpolator (Failed)
>>>> 1218 - pv.UndoRedo2 (Failed)
>>>> 1230 - pv.SelectionLabels (Failed)
>>>> 1234 - pv.TraceSupplementalProxiesFully (Failed)
>>>> 1252 - pvcs.CameraLink (Failed)
>>>> 1254 - pvcs.CheckableHeader (Failed)
>>>> 1275 - pvcs.FFTOverTime (Failed)
>>>> 1279 - pvcs.ImageVolumeRendering (Failed)
>>>> 1293 - pvcs.PlotOverTimeAutoApply (Failed)
>>>> 1301 - pvcs.PropertyLink (Failed)
>>>> 1317 - pvcs.TensorGlyph (Failed)
>>>> 1318 - pvcs.TemporalInterpolator (Failed)
>>>> 1325 - pvcs.UndoRedo2 (Failed)
>>>> 1340 - pvcs.TraceSupplementalProxiesFully (Failed)
>>>> 1346 - pvcs.HistogramSelection (Failed)
>>>> 1351 - pvcs.NonlinearSubdivisionDisplay (Failed)
>>>> 1360 - pvcs.FindDataDialog (Failed)
>>>> 1376 - pvcrs.CameraLink (Failed)
>>>> 1378 - pvcrs.CheckableHeader (Failed)
>>>> 1384 - pvcrs.ComparativeVisPanel (Failed)
>>>> 1415 - pvcrs.PropertyLink (Failed)
>>>> 1418 - pvcrs.RepresentationSelector (Failed)
>>>> 1420 - pvcrs.SaveCSV (Failed)
>>>> 1422 - pvcrs.SimpleInteraction (Failed)
>>>> 1424 - pvcrs.SliceAlongPolyline (Failed)
>>>> 1426 - pvcrs.SpreadSheet2 (Failed)
>>>> 1430 - pvcrs.TabbedViews (Failed)
>>>> 1432 - pvcrs.TemporalInterpolator (Failed)
>>>> 1439 - pvcrs.UndoRedo2 (Failed)
>>>> 1453 - pvcrs.TraceSupplementalProxiesFully (Failed)
>>>> 1458 - pvcrs.HistogramSelection (Failed)
>>>> 1469 - pvcrs.FindDataDialog (Failed)
>>>> Errors while running CTest
>>>> make: *** [test] Error 8
>>>>
>>>>
>>>>
>>>>
>>>> -jeff
>>>>
>>>>
>>>> Utkarsh
>>>>
>>>> On Fri, Jan 9, 2015 at 3:46 PM, Jeff Becker <jeffrey.c.becker at nasa.gov>
>>>> wrote:
>>>>> Almost there - make output below. Any ideas? Thanks.
>>>>>
>>>>> -jeff
>>>>>
>>>>> Scanning dependencies of target ParaViewExamples
>>>>> [ 80%] Build examples as a separate project
>>>>> Not searching for unused variables given on the command line.
>>>>> Not searching for unused variables given on the command line.
>>>>> Internal cmake changing into directory:
>>>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>>> ======== CMake output ======
>>>>> The C compiler identification is GNU 4.4.7
>>>>> The CXX compiler identification is GNU 4.4.7
>>>>> Check for working C compiler: /usr/bin/cc
>>>>> Configuring
>>>>> Check for working C compiler: /usr/bin/cc -- works
>>>>> Detecting C compiler ABI info
>>>>> Configuring
>>>>> Detecting C compiler ABI info - done
>>>>> Check for working CXX compiler: /usr/bin/c++
>>>>> Configuring
>>>>> Check for working CXX compiler: /usr/bin/c++ -- works
>>>>> Detecting CXX compiler ABI info
>>>>> Configuring
>>>>> Detecting CXX compiler ABI info - done
>>>>> Looking for Q_WS_X11
>>>>> Configuring
>>>>> Looking for Q_WS_X11 - found
>>>>> Looking for Q_WS_WIN
>>>>> Configuring
>>>>> Looking for Q_WS_WIN - not found
>>>>> Looking for Q_WS_QWS
>>>>> Configuring
>>>>> Looking for Q_WS_QWS - not found
>>>>> Looking for Q_WS_MAC
>>>>> Configuring
>>>>> Looking for Q_WS_MAC - not found
>>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>>> "4.8.6")
>>>>> Configuring
>>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>>> "4.8.6")
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring done
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating done
>>>>> Build files have been written to:
>>>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>>> "4.8.6")
>>>>> Configuring
>>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>>> "4.8.6")
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring
>>>>> Configuring done
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating
>>>>> Generating done
>>>>> Build files have been written to:
>>>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>>> ======== End CMake output ======
>>>>> Change Dir: /u/wk/jcbecker/ParaView-build/Examples/All
>>>>>
>>>>> Run Build Command:/usr/bin/gmake
>>>>> gmake[3]: Entering directory
>>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>> gmake[4]: Entering directory
>>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>> gmake[5]: Entering directory
>>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>> [ 1%] Generating Documentation HTMLs from xmls
>>>>> Processing wiki sources
>>>>> Processing wiki filters
>>>>> Processing wiki writers
>>>>> Processing wiki readers
>>>>> [ 1%] Compiling Qt help project SMMyElevation.qhp
>>>>> Building up file structure...
>>>>> Insert custom filters...
>>>>> Insert help data for filter section (1 of 1)...
>>>>> Insert files...
>>>>> Warning: The file
>>>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.css does
>>>>> not
>>>>> exist! Skipping it.
>>>>> Warning: The file
>>>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.png does
>>>>> not
>>>>> exist! Skipping it.
>>>>> Warning: The file
>>>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.jpg does
>>>>> not
>>>>> exist! Skipping it.
>>>>> Insert contents...
>>>>> Insert indices...
>>>>> Documentation successfully generated.
>>>>> [ 2%] Generating SMMyElevation_doc.h
>>>>> -- Generate module: SMMyElevation
>>>>> gmake[5]: *** No rule to make target
>>>>> `/u/wk/jcbecker/ParaView-build/bin/vtkWrapClientServer-pv4.3', needed by
>>>>> `Plugins/Filter/vtkMyElevationFilterClientServer.cxx'. Stop.
>>>>> gmake[5]: Leaving directory `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>> gmake[4]: *** [Plugins/Filter/CMakeFiles/SMMyElevation.dir/all] Error 2
>>>>> gmake[4]: Leaving directory `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>> gmake[3]: *** [all] Error 2
>>>>> gmake[3]: Leaving directory `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>> make[2]: *** [ParaViewExamples.done] Error 1
>>>>> make[1]: *** [CMakeFiles/ParaViewExamples.dir/all] Error 2
>>>>> make: *** [all] Error 2
>>>>>
>>>>> _______________________________________________
>>>>> Powered by www.kitware.com
>>>>>
>>>>> Visit other Kitware open-source projects at
>>>>> http://www.kitware.com/opensource/opensource.html
>>>>>
>>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>>> http://paraview.org/Wiki/ParaView
>>>>>
>>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>>
>>>>> Follow this link to subscribe/unsubscribe:
>>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>
>>>>
>>>>
>>>>
>>>> _______________________________________________
>>>> Powered by www.kitware.com
>>>>
>>>> Visit other Kitware open-source projects at
>>>> http://www.kitware.com/opensource/opensource.html
>>>>
>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>> http://paraview.org/Wiki/ParaView
>>>>
>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>
>>>> Follow this link to subscribe/unsubscribe:
>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>
From utkarsh.ayachit at kitware.com Mon Jan 12 17:01:51 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Mon, 12 Jan 2015 14:01:51 -0800
Subject: [Paraview] Relative frequencies in Histogram plots
In-Reply-To: <CACoCd8dask8qNs16Tift=DX+Vh9dVhwXsxxYfXjK_2Lx2LVLmg@mail.gmail.com>
References: <CACoCd8dask8qNs16Tift=DX+Vh9dVhwXsxxYfXjK_2Lx2LVLmg@mail.gmail.com>
Message-ID: <CADHSJjBrfT7AtSkdVK+=WfbkLhR8N3tyBUv=r0ksLY7wSOujXg@mail.gmail.com>
You could do this using a Python Programmable Filter.
Here's a script to use:
import numpy
sum = numpy.sum(inputs[0].RowData["bin_values"])
array = 1.0 * inputs[0].RowData["bin_values"]
array = 100.0*array/sum
output.RowData.append(array, "bin_values")
output.RowData.append(inputs[0].RowData["bin_extents"], "bin_extents")
Attached is a state file.
Utkarsh
On Wed, Jan 7, 2015 at 1:03 PM, Ethan Hereth <e.a.hereth at gmail.com> wrote:
> Good afternoon and happy new year!
>
> I have a colleague who would like to be able to plot the relative frequency
> of the histogram data instead of absolute bin count. I.e. instead of having
> the left axis say there are 100 things in bin one, he'd like for it to say
> that 5% of the things are in bin one.
>
> Is this possible?
>
> Thank you!
>
> --
> Ethan Alan Hereth
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From utkarsh.ayachit at kitware.com Mon Jan 12 17:07:52 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Mon, 12 Jan 2015 14:07:52 -0800
Subject: [Paraview] Relative frequencies in Histogram plots
In-Reply-To: <CADHSJjBrfT7AtSkdVK+=WfbkLhR8N3tyBUv=r0ksLY7wSOujXg@mail.gmail.com>
References: <CACoCd8dask8qNs16Tift=DX+Vh9dVhwXsxxYfXjK_2Lx2LVLmg@mail.gmail.com>
<CADHSJjBrfT7AtSkdVK+=WfbkLhR8N3tyBUv=r0ksLY7wSOujXg@mail.gmail.com>
Message-ID: <CADHSJjACT8NeYOF3YdN-0MjPxghivx_akPbxLn6wwD7B3igpyw@mail.gmail.com>
Before some yells at me for using bad code for type conversion :),
here's a better code:
import numpy
sum = numpy.sum(inputs[0].RowData["bin_values"])
array = inputs[0].RowData["bin_values"].astype(numpy.float32)
array = 100.0*array/sum
output.RowData.append(array, "bin_values")
output.RowData.append(inputs[0].RowData["bin_extents"], "bin_extents")
On Mon, Jan 12, 2015 at 2:01 PM, Utkarsh Ayachit
<utkarsh.ayachit at kitware.com> wrote:
> You could do this using a Python Programmable Filter.
>
> Here's a script to use:
>
> import numpy
> sum = numpy.sum(inputs[0].RowData["bin_values"])
> array = 1.0 * inputs[0].RowData["bin_values"]
> array = 100.0*array/sum
> output.RowData.append(array, "bin_values")
> output.RowData.append(inputs[0].RowData["bin_extents"], "bin_extents")
>
> Attached is a state file.
>
> Utkarsh
>
> On Wed, Jan 7, 2015 at 1:03 PM, Ethan Hereth <e.a.hereth at gmail.com> wrote:
>> Good afternoon and happy new year!
>>
>> I have a colleague who would like to be able to plot the relative frequency
>> of the histogram data instead of absolute bin count. I.e. instead of having
>> the left axis say there are 100 things in bin one, he'd like for it to say
>> that 5% of the things are in bin one.
>>
>> Is this possible?
>>
>> Thank you!
>>
>> --
>> Ethan Alan Hereth
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
From sebastien.jourdain at kitware.com Mon Jan 12 17:38:28 2015
From: sebastien.jourdain at kitware.com (Sebastien Jourdain)
Date: Mon, 12 Jan 2015 15:38:28 -0700
Subject: [Paraview] problem building ParaView Examples
In-Reply-To: <54B440C9.1050708@nasa.gov>
References: <54B03E09.2060507@nasa.gov>
<CADHSJjBmOMcLn9SbRTqSZNs83GhmnGGmg-L6zgk-=6BvUfHj-Q@mail.gmail.com>
<54B416B4.8020208@nasa.gov> <54B42260.4040501@nasa.gov>
<CADHSJjC1g_ybTTYf0euHYP+DbsWcQNVFUPnwAFAL4sVavg+a1g@mail.gmail.com>
<54B43C93.2040001@nasa.gov>
<CADHSJjA7E2iDA2x7a9+q52EHG4=MQy4-bfG_92dSBvdTTT=igw@mail.gmail.com>
<54B440C9.1050708@nasa.gov>
Message-ID: <CABObKxc4xehT8+nq5OjbRqG+WmtUqWrwkXmfnYZmVpW2Q4L+pg@mail.gmail.com>
Do you know if that picture come from your screensaver or anything else?
It seems to be the picture that get captured regardless of the test that
ran and failed.
On Mon, Jan 12, 2015 at 2:46 PM, Jeff Becker <jeffrey.c.becker at nasa.gov>
wrote:
> On 01/12/2015 01:38 PM, Utkarsh Ayachit wrote:
>
>> That's more from before! :).
>>
>
> I assume you meant more "than" before?
>
> Anything funky about the X configuration?
>>
>
> What should I look for?
>
>> Looks like the framebuffer grabs end up capturing ghost images.
>>
>
> -jeff
>
>
>> Utkarsh
>>
>> On Mon, Jan 12, 2015 at 1:28 PM, Jeff Becker <jeffrey.c.becker at nasa.gov>
>> wrote:
>>
>>> On 01/12/2015 11:39 AM, Utkarsh Ayachit wrote:
>>>
>>>> Mind doing a "ctest -D Experimental"? That'll submit the test results
>>>> to the ParaView dashboard [1] and will provide use more information as
>>>> to why those tests failed.
>>>>
>>>
>>> Done. 996 tests failed (see website below). Thanks.
>>>
>>> -jeff
>>>
>>> [1] https://open.cdash.org/index.php?project=ParaView
>>>>
>>>> On Mon, Jan 12, 2015 at 11:37 AM, Jeff Becker <
>>>> jeffrey.c.becker at nasa.gov>
>>>> wrote:
>>>>
>>>>> On 01/12/2015 10:47 AM, Jeff Becker wrote:
>>>>>
>>>>> On 01/10/2015 04:39 PM, Utkarsh Ayachit wrote:
>>>>>
>>>>> Not sure what's the issue. I tested out in my build and seems to work
>>>>> as
>>>>> expected. Mind attaching your CMakeCache.txt file? Did you by any
>>>>> chance
>>>>> turn on PARAVIEW_USE_UNIFIED_BINDINGS cmake flag?
>>>>>
>>>>>
>>>>> Yes. I turned that off, and now it builds fine. Thanks.
>>>>>
>>>>>
>>>>> I tried 'make test' and got:
>>>>>
>>>>> 97% tests passed, 47 tests failed out of 1499
>>>>>
>>>>> Failed tests listed below. Do I need to worry about these, and if so,
>>>>> how
>>>>> to
>>>>> fix?
>>>>>
>>>>> Thanks.
>>>>>
>>>>> -jeff
>>>>>
>>>>> The following tests FAILED:
>>>>> 1 - pv.TestDevelopmentInstall (Failed)
>>>>> 73 - vtkPVVTKExtensionsDefault-HeaderTest (Failed)
>>>>> 688 - vtkIONetCDFPython-NetCDFCF2DBounds (Failed)
>>>>> 779 - vtkPVServerManagerDefaultPython-MultiView (Failed)
>>>>> 786 - vtkPVServerManagerDefaultPython-SymmetricMultiView
>>>>> (Failed)
>>>>> 1026 - vtkRenderingVolumeCxx-TestGPUVolumeRayCastMapperWind
>>>>> owLevel
>>>>> (Failed)
>>>>> 1103 - pv.FileSeries (Failed)
>>>>> 1104 - pv.HistogramSelection (Failed)
>>>>> 1119 - pv.FindDataDialog (Failed)
>>>>> 1136 - pv.AnimatePipelineTime (Failed)
>>>>> 1140 - pv.CameraLink (Failed)
>>>>> 1142 - pv.CheckableHeader (Failed)
>>>>> 1165 - pv.FFTOverTime (Failed)
>>>>> 1178 - pv.NormalGlyphs (Failed)
>>>>> 1186 - pv.PlotOverTimeAutoApply (Failed)
>>>>> 1211 - pv.TemporalInterpolator (Failed)
>>>>> 1218 - pv.UndoRedo2 (Failed)
>>>>> 1230 - pv.SelectionLabels (Failed)
>>>>> 1234 - pv.TraceSupplementalProxiesFully (Failed)
>>>>> 1252 - pvcs.CameraLink (Failed)
>>>>> 1254 - pvcs.CheckableHeader (Failed)
>>>>> 1275 - pvcs.FFTOverTime (Failed)
>>>>> 1279 - pvcs.ImageVolumeRendering (Failed)
>>>>> 1293 - pvcs.PlotOverTimeAutoApply (Failed)
>>>>> 1301 - pvcs.PropertyLink (Failed)
>>>>> 1317 - pvcs.TensorGlyph (Failed)
>>>>> 1318 - pvcs.TemporalInterpolator (Failed)
>>>>> 1325 - pvcs.UndoRedo2 (Failed)
>>>>> 1340 - pvcs.TraceSupplementalProxiesFully (Failed)
>>>>> 1346 - pvcs.HistogramSelection (Failed)
>>>>> 1351 - pvcs.NonlinearSubdivisionDisplay (Failed)
>>>>> 1360 - pvcs.FindDataDialog (Failed)
>>>>> 1376 - pvcrs.CameraLink (Failed)
>>>>> 1378 - pvcrs.CheckableHeader (Failed)
>>>>> 1384 - pvcrs.ComparativeVisPanel (Failed)
>>>>> 1415 - pvcrs.PropertyLink (Failed)
>>>>> 1418 - pvcrs.RepresentationSelector (Failed)
>>>>> 1420 - pvcrs.SaveCSV (Failed)
>>>>> 1422 - pvcrs.SimpleInteraction (Failed)
>>>>> 1424 - pvcrs.SliceAlongPolyline (Failed)
>>>>> 1426 - pvcrs.SpreadSheet2 (Failed)
>>>>> 1430 - pvcrs.TabbedViews (Failed)
>>>>> 1432 - pvcrs.TemporalInterpolator (Failed)
>>>>> 1439 - pvcrs.UndoRedo2 (Failed)
>>>>> 1453 - pvcrs.TraceSupplementalProxiesFully (Failed)
>>>>> 1458 - pvcrs.HistogramSelection (Failed)
>>>>> 1469 - pvcrs.FindDataDialog (Failed)
>>>>> Errors while running CTest
>>>>> make: *** [test] Error 8
>>>>>
>>>>>
>>>>>
>>>>>
>>>>> -jeff
>>>>>
>>>>>
>>>>> Utkarsh
>>>>>
>>>>> On Fri, Jan 9, 2015 at 3:46 PM, Jeff Becker <jeffrey.c.becker at nasa.gov
>>>>> >
>>>>> wrote:
>>>>>
>>>>>> Almost there - make output below. Any ideas? Thanks.
>>>>>>
>>>>>> -jeff
>>>>>>
>>>>>> Scanning dependencies of target ParaViewExamples
>>>>>> [ 80%] Build examples as a separate project
>>>>>> Not searching for unused variables given on the command line.
>>>>>> Not searching for unused variables given on the command line.
>>>>>> Internal cmake changing into directory:
>>>>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>>>> ======== CMake output ======
>>>>>> The C compiler identification is GNU 4.4.7
>>>>>> The CXX compiler identification is GNU 4.4.7
>>>>>> Check for working C compiler: /usr/bin/cc
>>>>>> Configuring
>>>>>> Check for working C compiler: /usr/bin/cc -- works
>>>>>> Detecting C compiler ABI info
>>>>>> Configuring
>>>>>> Detecting C compiler ABI info - done
>>>>>> Check for working CXX compiler: /usr/bin/c++
>>>>>> Configuring
>>>>>> Check for working CXX compiler: /usr/bin/c++ -- works
>>>>>> Detecting CXX compiler ABI info
>>>>>> Configuring
>>>>>> Detecting CXX compiler ABI info - done
>>>>>> Looking for Q_WS_X11
>>>>>> Configuring
>>>>>> Looking for Q_WS_X11 - found
>>>>>> Looking for Q_WS_WIN
>>>>>> Configuring
>>>>>> Looking for Q_WS_WIN - not found
>>>>>> Looking for Q_WS_QWS
>>>>>> Configuring
>>>>>> Looking for Q_WS_QWS - not found
>>>>>> Looking for Q_WS_MAC
>>>>>> Configuring
>>>>>> Looking for Q_WS_MAC - not found
>>>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>>>> "4.8.6")
>>>>>> Configuring
>>>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>>>> "4.8.6")
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
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>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
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>>>>>> Configuring
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>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring done
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating done
>>>>>> Build files have been written to:
>>>>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>>>> "4.8.6")
>>>>>> Configuring
>>>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>>>> "4.8.6")
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
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>>>>>> Configuring
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>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring
>>>>>> Configuring done
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating
>>>>>> Generating done
>>>>>> Build files have been written to:
>>>>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>>>> ======== End CMake output ======
>>>>>> Change Dir: /u/wk/jcbecker/ParaView-build/Examples/All
>>>>>>
>>>>>> Run Build Command:/usr/bin/gmake
>>>>>> gmake[3]: Entering directory
>>>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>>> gmake[4]: Entering directory
>>>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>>> gmake[5]: Entering directory
>>>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>>> [ 1%] Generating Documentation HTMLs from xmls
>>>>>> Processing wiki sources
>>>>>> Processing wiki filters
>>>>>> Processing wiki writers
>>>>>> Processing wiki readers
>>>>>> [ 1%] Compiling Qt help project SMMyElevation.qhp
>>>>>> Building up file structure...
>>>>>> Insert custom filters...
>>>>>> Insert help data for filter section (1 of 1)...
>>>>>> Insert files...
>>>>>> Warning: The file
>>>>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.css
>>>>>> does
>>>>>> not
>>>>>> exist! Skipping it.
>>>>>> Warning: The file
>>>>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.png
>>>>>> does
>>>>>> not
>>>>>> exist! Skipping it.
>>>>>> Warning: The file
>>>>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.jpg
>>>>>> does
>>>>>> not
>>>>>> exist! Skipping it.
>>>>>> Insert contents...
>>>>>> Insert indices...
>>>>>> Documentation successfully generated.
>>>>>> [ 2%] Generating SMMyElevation_doc.h
>>>>>> -- Generate module: SMMyElevation
>>>>>> gmake[5]: *** No rule to make target
>>>>>> `/u/wk/jcbecker/ParaView-build/bin/vtkWrapClientServer-pv4.3',
>>>>>> needed by
>>>>>> `Plugins/Filter/vtkMyElevationFilterClientServer.cxx'. Stop.
>>>>>> gmake[5]: Leaving directory `/u/wk/jcbecker/ParaView-
>>>>>> build/Examples/All'
>>>>>> gmake[4]: *** [Plugins/Filter/CMakeFiles/SMMyElevation.dir/all]
>>>>>> Error 2
>>>>>> gmake[4]: Leaving directory `/u/wk/jcbecker/ParaView-
>>>>>> build/Examples/All'
>>>>>> gmake[3]: *** [all] Error 2
>>>>>> gmake[3]: Leaving directory `/u/wk/jcbecker/ParaView-
>>>>>> build/Examples/All'
>>>>>> make[2]: *** [ParaViewExamples.done] Error 1
>>>>>> make[1]: *** [CMakeFiles/ParaViewExamples.dir/all] Error 2
>>>>>> make: *** [all] Error 2
>>>>>>
>>>>>> _______________________________________________
>>>>>> Powered by www.kitware.com
>>>>>>
>>>>>> Visit other Kitware open-source projects at
>>>>>> http://www.kitware.com/opensource/opensource.html
>>>>>>
>>>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>>>> http://paraview.org/Wiki/ParaView
>>>>>>
>>>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>>>
>>>>>> Follow this link to subscribe/unsubscribe:
>>>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>>>
>>>>>
>>>>>
>>>>>
>>>>>
>>>>> _______________________________________________
>>>>> Powered by www.kitware.com
>>>>>
>>>>> Visit other Kitware open-source projects at
>>>>> http://www.kitware.com/opensource/opensource.html
>>>>>
>>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>>> http://paraview.org/Wiki/ParaView
>>>>>
>>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>>
>>>>> Follow this link to subscribe/unsubscribe:
>>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>>
>>>>>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/
> opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From jeffrey.c.becker at nasa.gov Mon Jan 12 17:51:05 2015
From: jeffrey.c.becker at nasa.gov (Jeff Becker)
Date: Mon, 12 Jan 2015 14:51:05 -0800
Subject: [Paraview] problem building ParaView Examples
In-Reply-To: <CABObKxc4xehT8+nq5OjbRqG+WmtUqWrwkXmfnYZmVpW2Q4L+pg@mail.gmail.com>
References: <54B03E09.2060507@nasa.gov> <CADHSJjBmOMcLn9SbRTqSZNs83GhmnGGmg-L6zgk-=6BvUfHj-Q@mail.gmail.com> <54B416B4.8020208@nasa.gov> <54B42260.4040501@nasa.gov> <CADHSJjC1g_ybTTYf0euHYP+DbsWcQNVFUPnwAFAL4sVavg+a1g@mail.gmail.com> <54B43C93.2040001@nasa.gov> <CADHSJjA7E2iDA2x7a9+q52EHG4=MQy4-bfG_92dSBvdTTT=igw@mail.gmail.com> <54B440C9.1050708@nasa.gov>
<CABObKxc4xehT8+nq5OjbRqG+WmtUqWrwkXmfnYZmVpW2Q4L+pg@mail.gmail.com>
Message-ID: <54B44FD9.1090906@nasa.gov>
On 01/12/2015 02:38 PM, Sebastien Jourdain wrote:
> Do you know if that picture come from your screensaver or anything else?
> It seems to be the picture that get captured regardless of the test
> that ran and failed.
>
I don't recognize it.
I was thinking that it might be a permission issue. I could try running
the tests as root.... Would that help? Thanks.
-jeff
>
>
> On Mon, Jan 12, 2015 at 2:46 PM, Jeff Becker
> <jeffrey.c.becker at nasa.gov <mailto:jeffrey.c.becker at nasa.gov>> wrote:
>
> On 01/12/2015 01:38 PM, Utkarsh Ayachit wrote:
>
> That's more from before! :).
>
>
> I assume you meant more "than" before?
>
> Anything funky about the X configuration?
>
>
> What should I look for?
>
> Looks like the framebuffer grabs end up capturing ghost images.
>
>
> -jeff
>
>
> Utkarsh
>
> On Mon, Jan 12, 2015 at 1:28 PM, Jeff Becker
> <jeffrey.c.becker at nasa.gov <mailto:jeffrey.c.becker at nasa.gov>>
> wrote:
>
> On 01/12/2015 11:39 AM, Utkarsh Ayachit wrote:
>
> Mind doing a "ctest -D Experimental"? That'll submit
> the test results
> to the ParaView dashboard [1] and will provide use
> more information as
> to why those tests failed.
>
>
> Done. 996 tests failed (see website below). Thanks.
>
> -jeff
>
> [1] https://open.cdash.org/index.php?project=ParaView
>
> On Mon, Jan 12, 2015 at 11:37 AM, Jeff Becker
> <jeffrey.c.becker at nasa.gov
> <mailto:jeffrey.c.becker at nasa.gov>>
> wrote:
>
> On 01/12/2015 10:47 AM, Jeff Becker wrote:
>
> On 01/10/2015 04:39 PM, Utkarsh Ayachit wrote:
>
> Not sure what's the issue. I tested out in my
> build and seems to work as
> expected. Mind attaching your CMakeCache.txt file?
> Did you by any chance
> turn on PARAVIEW_USE_UNIFIED_BINDINGS cmake flag?
>
>
> Yes. I turned that off, and now it builds fine.
> Thanks.
>
>
> I tried 'make test' and got:
>
> 97% tests passed, 47 tests failed out of 1499
>
> Failed tests listed below. Do I need to worry
> about these, and if so, how
> to
> fix?
>
> Thanks.
>
> -jeff
>
> The following tests FAILED:
> 1 - pv.TestDevelopmentInstall (Failed)
> 73 - vtkPVVTKExtensionsDefault-HeaderTest
> (Failed)
> 688 - vtkIONetCDFPython-NetCDFCF2DBounds
> (Failed)
> 779 -
> vtkPVServerManagerDefaultPython-MultiView (Failed)
> 786 -
> vtkPVServerManagerDefaultPython-SymmetricMultiView
> (Failed)
> 1026 -
> vtkRenderingVolumeCxx-TestGPUVolumeRayCastMapperWindowLevel
> (Failed)
> 1103 - pv.FileSeries (Failed)
> 1104 - pv.HistogramSelection (Failed)
> 1119 - pv.FindDataDialog (Failed)
> 1136 - pv.AnimatePipelineTime (Failed)
> 1140 - pv.CameraLink (Failed)
> 1142 - pv.CheckableHeader (Failed)
> 1165 - pv.FFTOverTime (Failed)
> 1178 - pv.NormalGlyphs (Failed)
> 1186 - pv.PlotOverTimeAutoApply (Failed)
> 1211 - pv.TemporalInterpolator (Failed)
> 1218 - pv.UndoRedo2 (Failed)
> 1230 - pv.SelectionLabels (Failed)
> 1234 - pv.TraceSupplementalProxiesFully (Failed)
> 1252 - pvcs.CameraLink (Failed)
> 1254 - pvcs.CheckableHeader (Failed)
> 1275 - pvcs.FFTOverTime (Failed)
> 1279 - pvcs.ImageVolumeRendering (Failed)
> 1293 - pvcs.PlotOverTimeAutoApply (Failed)
> 1301 - pvcs.PropertyLink (Failed)
> 1317 - pvcs.TensorGlyph (Failed)
> 1318 - pvcs.TemporalInterpolator (Failed)
> 1325 - pvcs.UndoRedo2 (Failed)
> 1340 - pvcs.TraceSupplementalProxiesFully
> (Failed)
> 1346 - pvcs.HistogramSelection (Failed)
> 1351 - pvcs.NonlinearSubdivisionDisplay (Failed)
> 1360 - pvcs.FindDataDialog (Failed)
> 1376 - pvcrs.CameraLink (Failed)
> 1378 - pvcrs.CheckableHeader (Failed)
> 1384 - pvcrs.ComparativeVisPanel (Failed)
> 1415 - pvcrs.PropertyLink (Failed)
> 1418 - pvcrs.RepresentationSelector (Failed)
> 1420 - pvcrs.SaveCSV (Failed)
> 1422 - pvcrs.SimpleInteraction (Failed)
> 1424 - pvcrs.SliceAlongPolyline (Failed)
> 1426 - pvcrs.SpreadSheet2 (Failed)
> 1430 - pvcrs.TabbedViews (Failed)
> 1432 - pvcrs.TemporalInterpolator (Failed)
> 1439 - pvcrs.UndoRedo2 (Failed)
> 1453 - pvcrs.TraceSupplementalProxiesFully
> (Failed)
> 1458 - pvcrs.HistogramSelection (Failed)
> 1469 - pvcrs.FindDataDialog (Failed)
> Errors while running CTest
> make: *** [test] Error 8
>
>
>
>
> -jeff
>
>
> Utkarsh
>
> On Fri, Jan 9, 2015 at 3:46 PM, Jeff Becker
> <jeffrey.c.becker at nasa.gov
> <mailto:jeffrey.c.becker at nasa.gov>>
> wrote:
>
> Almost there - make output below. Any ideas?
> Thanks.
>
> -jeff
>
> Scanning dependencies of target ParaViewExamples
> [ 80%] Build examples as a separate project
> Not searching for unused variables given on
> the command line.
> Not searching for unused variables given on
> the command line.
> Internal cmake changing into directory:
> /u/wk/jcbecker/ParaView-build/Examples/All
> ======== CMake output ======
> The C compiler identification is GNU 4.4.7
> The CXX compiler identification is GNU 4.4.7
> Check for working C compiler: /usr/bin/cc
> Configuring
> Check for working C compiler: /usr/bin/cc -- works
> Detecting C compiler ABI info
> Configuring
> Detecting C compiler ABI info - done
> Check for working CXX compiler: /usr/bin/c++
> Configuring
> Check for working CXX compiler: /usr/bin/c++
> -- works
> Detecting CXX compiler ABI info
> Configuring
> Detecting CXX compiler ABI info - done
> Looking for Q_WS_X11
> Configuring
> Looking for Q_WS_X11 - found
> Looking for Q_WS_WIN
> Configuring
> Looking for Q_WS_WIN - not found
> Looking for Q_WS_QWS
> Configuring
> Looking for Q_WS_QWS - not found
> Looking for Q_WS_MAC
> Configuring
> Looking for Q_WS_MAC - not found
> Found Qt4:
> /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found
> version
> "4.8.6")
> Configuring
> Found Qt4:
> /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found
> version
> "4.8.6")
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring done
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating done
> Build files have been written to:
> /u/wk/jcbecker/ParaView-build/Examples/All
> Found Qt4:
> /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found
> version
> "4.8.6")
> Configuring
> Found Qt4:
> /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found
> version
> "4.8.6")
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring
> Configuring done
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating
> Generating done
> Build files have been written to:
> /u/wk/jcbecker/ParaView-build/Examples/All
> ======== End CMake output ======
> Change Dir:
> /u/wk/jcbecker/ParaView-build/Examples/All
>
> Run Build Command:/usr/bin/gmake
> gmake[3]: Entering directory
> `/u/wk/jcbecker/ParaView-build/Examples/All'
> gmake[4]: Entering directory
> `/u/wk/jcbecker/ParaView-build/Examples/All'
> gmake[5]: Entering directory
> `/u/wk/jcbecker/ParaView-build/Examples/All'
> [ 1%] Generating Documentation HTMLs from xmls
> Processing wiki sources
> Processing wiki filters
> Processing wiki writers
> Processing wiki readers
> [ 1%] Compiling Qt help project SMMyElevation.qhp
> Building up file structure...
> Insert custom filters...
> Insert help data for filter section (1 of 1)...
> Insert files...
> Warning: The file
> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.css
> does
> not
> exist! Skipping it.
> Warning: The file
> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.png
> does
> not
> exist! Skipping it.
> Warning: The file
> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.jpg
> does
> not
> exist! Skipping it.
> Insert contents...
> Insert indices...
> Documentation successfully generated.
> [ 2%] Generating SMMyElevation_doc.h
> -- Generate module: SMMyElevation
> gmake[5]: *** No rule to make target
> `/u/wk/jcbecker/ParaView-build/bin/vtkWrapClientServer-pv4.3',
> needed by
> `Plugins/Filter/vtkMyElevationFilterClientServer.cxx'.
> Stop.
> gmake[5]: Leaving directory
> `/u/wk/jcbecker/ParaView-build/Examples/All'
> gmake[4]: ***
> [Plugins/Filter/CMakeFiles/SMMyElevation.dir/all]
> Error 2
> gmake[4]: Leaving directory
> `/u/wk/jcbecker/ParaView-build/Examples/All'
> gmake[3]: *** [all] Error 2
> gmake[3]: Leaving directory
> `/u/wk/jcbecker/ParaView-build/Examples/All'
> make[2]: *** [ParaViewExamples.done] Error 1
> make[1]: ***
> [CMakeFiles/ParaViewExamples.dir/all] Error 2
> make: *** [all] Error 2
>
> _______________________________________________
> Powered by www.kitware.com
> <http://www.kitware.com>
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the
> ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at:
> http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
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>
>
>
>
> _______________________________________________
> Powered by www.kitware.com <http://www.kitware.com>
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the
> ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at:
> http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
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>
>
> _______________________________________________
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>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
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>
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From sebastien.jourdain at kitware.com Mon Jan 12 18:18:06 2015
From: sebastien.jourdain at kitware.com (Sebastien Jourdain)
Date: Mon, 12 Jan 2015 16:18:06 -0700
Subject: [Paraview] problem building ParaView Examples
In-Reply-To: <54B44FD9.1090906@nasa.gov>
References: <54B03E09.2060507@nasa.gov>
<CADHSJjBmOMcLn9SbRTqSZNs83GhmnGGmg-L6zgk-=6BvUfHj-Q@mail.gmail.com>
<54B416B4.8020208@nasa.gov> <54B42260.4040501@nasa.gov>
<CADHSJjC1g_ybTTYf0euHYP+DbsWcQNVFUPnwAFAL4sVavg+a1g@mail.gmail.com>
<54B43C93.2040001@nasa.gov>
<CADHSJjA7E2iDA2x7a9+q52EHG4=MQy4-bfG_92dSBvdTTT=igw@mail.gmail.com>
<54B440C9.1050708@nasa.gov>
<CABObKxc4xehT8+nq5OjbRqG+WmtUqWrwkXmfnYZmVpW2Q4L+pg@mail.gmail.com>
<54B44FD9.1090906@nasa.gov>
Message-ID: <CABObKxcNhpxksiBFHSwCbtSWBfVQoM46dSOGeGOxjXh4_V+NQg@mail.gmail.com>
Hum,
That should not really matter root or no-root. But since lot of test
perform some rendering operations and that we capture that section of the
screen, we often (on wrongly setup dashboard) see screensaver capture
instead of the user desktop where the expected rendering is actually
happening. (Hence my previous comment) Such error provide false positive
error.
And looking at several tests here:
https://open.cdash.org/viewTest.php?onlyfailed&buildid=3650082
I've notice the same captured image.
When you run "ctest -D Experimental", do you see flashing windows poping up
with that image?
Or do they seems to be somewhat valid?
If you try again, try to see if you can disable the screensaver altogether.
Seb
On Mon, Jan 12, 2015 at 3:51 PM, Jeff Becker <jeffrey.c.becker at nasa.gov>
wrote:
> On 01/12/2015 02:38 PM, Sebastien Jourdain wrote:
>
> Do you know if that picture come from your screensaver or anything else?
> It seems to be the picture that get captured regardless of the test that
> ran and failed.
>
> I don't recognize it.
>
> I was thinking that it might be a permission issue. I could try running
> the tests as root.... Would that help? Thanks.
>
> -jeff
>
>
>
>
> On Mon, Jan 12, 2015 at 2:46 PM, Jeff Becker <jeffrey.c.becker at nasa.gov>
> wrote:
>
>> On 01/12/2015 01:38 PM, Utkarsh Ayachit wrote:
>>
>>> That's more from before! :).
>>>
>>
>> I assume you meant more "than" before?
>>
>> Anything funky about the X configuration?
>>>
>>
>> What should I look for?
>>
>>> Looks like the framebuffer grabs end up capturing ghost images.
>>>
>>
>> -jeff
>>
>>
>>> Utkarsh
>>>
>>> On Mon, Jan 12, 2015 at 1:28 PM, Jeff Becker <jeffrey.c.becker at nasa.gov>
>>> wrote:
>>>
>>>> On 01/12/2015 11:39 AM, Utkarsh Ayachit wrote:
>>>>
>>>>> Mind doing a "ctest -D Experimental"? That'll submit the test results
>>>>> to the ParaView dashboard [1] and will provide use more information as
>>>>> to why those tests failed.
>>>>>
>>>>
>>>> Done. 996 tests failed (see website below). Thanks.
>>>>
>>>> -jeff
>>>>
>>>> [1] https://open.cdash.org/index.php?project=ParaView
>>>>>
>>>>> On Mon, Jan 12, 2015 at 11:37 AM, Jeff Becker <
>>>>> jeffrey.c.becker at nasa.gov>
>>>>> wrote:
>>>>>
>>>>>> On 01/12/2015 10:47 AM, Jeff Becker wrote:
>>>>>>
>>>>>> On 01/10/2015 04:39 PM, Utkarsh Ayachit wrote:
>>>>>>
>>>>>> Not sure what's the issue. I tested out in my build and seems to work
>>>>>> as
>>>>>> expected. Mind attaching your CMakeCache.txt file? Did you by any
>>>>>> chance
>>>>>> turn on PARAVIEW_USE_UNIFIED_BINDINGS cmake flag?
>>>>>>
>>>>>>
>>>>>> Yes. I turned that off, and now it builds fine. Thanks.
>>>>>>
>>>>>>
>>>>>> I tried 'make test' and got:
>>>>>>
>>>>>> 97% tests passed, 47 tests failed out of 1499
>>>>>>
>>>>>> Failed tests listed below. Do I need to worry about these, and if so,
>>>>>> how
>>>>>> to
>>>>>> fix?
>>>>>>
>>>>>> Thanks.
>>>>>>
>>>>>> -jeff
>>>>>>
>>>>>> The following tests FAILED:
>>>>>> 1 - pv.TestDevelopmentInstall (Failed)
>>>>>> 73 - vtkPVVTKExtensionsDefault-HeaderTest (Failed)
>>>>>> 688 - vtkIONetCDFPython-NetCDFCF2DBounds (Failed)
>>>>>> 779 - vtkPVServerManagerDefaultPython-MultiView (Failed)
>>>>>> 786 - vtkPVServerManagerDefaultPython-SymmetricMultiView
>>>>>> (Failed)
>>>>>> 1026 -
>>>>>> vtkRenderingVolumeCxx-TestGPUVolumeRayCastMapperWindowLevel
>>>>>> (Failed)
>>>>>> 1103 - pv.FileSeries (Failed)
>>>>>> 1104 - pv.HistogramSelection (Failed)
>>>>>> 1119 - pv.FindDataDialog (Failed)
>>>>>> 1136 - pv.AnimatePipelineTime (Failed)
>>>>>> 1140 - pv.CameraLink (Failed)
>>>>>> 1142 - pv.CheckableHeader (Failed)
>>>>>> 1165 - pv.FFTOverTime (Failed)
>>>>>> 1178 - pv.NormalGlyphs (Failed)
>>>>>> 1186 - pv.PlotOverTimeAutoApply (Failed)
>>>>>> 1211 - pv.TemporalInterpolator (Failed)
>>>>>> 1218 - pv.UndoRedo2 (Failed)
>>>>>> 1230 - pv.SelectionLabels (Failed)
>>>>>> 1234 - pv.TraceSupplementalProxiesFully (Failed)
>>>>>> 1252 - pvcs.CameraLink (Failed)
>>>>>> 1254 - pvcs.CheckableHeader (Failed)
>>>>>> 1275 - pvcs.FFTOverTime (Failed)
>>>>>> 1279 - pvcs.ImageVolumeRendering (Failed)
>>>>>> 1293 - pvcs.PlotOverTimeAutoApply (Failed)
>>>>>> 1301 - pvcs.PropertyLink (Failed)
>>>>>> 1317 - pvcs.TensorGlyph (Failed)
>>>>>> 1318 - pvcs.TemporalInterpolator (Failed)
>>>>>> 1325 - pvcs.UndoRedo2 (Failed)
>>>>>> 1340 - pvcs.TraceSupplementalProxiesFully (Failed)
>>>>>> 1346 - pvcs.HistogramSelection (Failed)
>>>>>> 1351 - pvcs.NonlinearSubdivisionDisplay (Failed)
>>>>>> 1360 - pvcs.FindDataDialog (Failed)
>>>>>> 1376 - pvcrs.CameraLink (Failed)
>>>>>> 1378 - pvcrs.CheckableHeader (Failed)
>>>>>> 1384 - pvcrs.ComparativeVisPanel (Failed)
>>>>>> 1415 - pvcrs.PropertyLink (Failed)
>>>>>> 1418 - pvcrs.RepresentationSelector (Failed)
>>>>>> 1420 - pvcrs.SaveCSV (Failed)
>>>>>> 1422 - pvcrs.SimpleInteraction (Failed)
>>>>>> 1424 - pvcrs.SliceAlongPolyline (Failed)
>>>>>> 1426 - pvcrs.SpreadSheet2 (Failed)
>>>>>> 1430 - pvcrs.TabbedViews (Failed)
>>>>>> 1432 - pvcrs.TemporalInterpolator (Failed)
>>>>>> 1439 - pvcrs.UndoRedo2 (Failed)
>>>>>> 1453 - pvcrs.TraceSupplementalProxiesFully (Failed)
>>>>>> 1458 - pvcrs.HistogramSelection (Failed)
>>>>>> 1469 - pvcrs.FindDataDialog (Failed)
>>>>>> Errors while running CTest
>>>>>> make: *** [test] Error 8
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>> -jeff
>>>>>>
>>>>>>
>>>>>> Utkarsh
>>>>>>
>>>>>> On Fri, Jan 9, 2015 at 3:46 PM, Jeff Becker <
>>>>>> jeffrey.c.becker at nasa.gov>
>>>>>> wrote:
>>>>>>
>>>>>>> Almost there - make output below. Any ideas? Thanks.
>>>>>>>
>>>>>>> -jeff
>>>>>>>
>>>>>>> Scanning dependencies of target ParaViewExamples
>>>>>>> [ 80%] Build examples as a separate project
>>>>>>> Not searching for unused variables given on the command line.
>>>>>>> Not searching for unused variables given on the command line.
>>>>>>> Internal cmake changing into directory:
>>>>>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>>>>> ======== CMake output ======
>>>>>>> The C compiler identification is GNU 4.4.7
>>>>>>> The CXX compiler identification is GNU 4.4.7
>>>>>>> Check for working C compiler: /usr/bin/cc
>>>>>>> Configuring
>>>>>>> Check for working C compiler: /usr/bin/cc -- works
>>>>>>> Detecting C compiler ABI info
>>>>>>> Configuring
>>>>>>> Detecting C compiler ABI info - done
>>>>>>> Check for working CXX compiler: /usr/bin/c++
>>>>>>> Configuring
>>>>>>> Check for working CXX compiler: /usr/bin/c++ -- works
>>>>>>> Detecting CXX compiler ABI info
>>>>>>> Configuring
>>>>>>> Detecting CXX compiler ABI info - done
>>>>>>> Looking for Q_WS_X11
>>>>>>> Configuring
>>>>>>> Looking for Q_WS_X11 - found
>>>>>>> Looking for Q_WS_WIN
>>>>>>> Configuring
>>>>>>> Looking for Q_WS_WIN - not found
>>>>>>> Looking for Q_WS_QWS
>>>>>>> Configuring
>>>>>>> Looking for Q_WS_QWS - not found
>>>>>>> Looking for Q_WS_MAC
>>>>>>> Configuring
>>>>>>> Looking for Q_WS_MAC - not found
>>>>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>>>>> "4.8.6")
>>>>>>> Configuring
>>>>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>>>>> "4.8.6")
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring done
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating done
>>>>>>> Build files have been written to:
>>>>>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>>>>> "4.8.6")
>>>>>>> Configuring
>>>>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>>>>> "4.8.6")
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring
>>>>>>> Configuring done
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating
>>>>>>> Generating done
>>>>>>> Build files have been written to:
>>>>>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>>>>> ======== End CMake output ======
>>>>>>> Change Dir: /u/wk/jcbecker/ParaView-build/Examples/All
>>>>>>>
>>>>>>> Run Build Command:/usr/bin/gmake
>>>>>>> gmake[3]: Entering directory
>>>>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>>>> gmake[4]: Entering directory
>>>>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>>>> gmake[5]: Entering directory
>>>>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>>>> [ 1%] Generating Documentation HTMLs from xmls
>>>>>>> Processing wiki sources
>>>>>>> Processing wiki filters
>>>>>>> Processing wiki writers
>>>>>>> Processing wiki readers
>>>>>>> [ 1%] Compiling Qt help project SMMyElevation.qhp
>>>>>>> Building up file structure...
>>>>>>> Insert custom filters...
>>>>>>> Insert help data for filter section (1 of 1)...
>>>>>>> Insert files...
>>>>>>> Warning: The file
>>>>>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.css
>>>>>>> does
>>>>>>> not
>>>>>>> exist! Skipping it.
>>>>>>> Warning: The file
>>>>>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.png
>>>>>>> does
>>>>>>> not
>>>>>>> exist! Skipping it.
>>>>>>> Warning: The file
>>>>>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.jpg
>>>>>>> does
>>>>>>> not
>>>>>>> exist! Skipping it.
>>>>>>> Insert contents...
>>>>>>> Insert indices...
>>>>>>> Documentation successfully generated.
>>>>>>> [ 2%] Generating SMMyElevation_doc.h
>>>>>>> -- Generate module: SMMyElevation
>>>>>>> gmake[5]: *** No rule to make target
>>>>>>> `/u/wk/jcbecker/ParaView-build/bin/vtkWrapClientServer-pv4.3',
>>>>>>> needed by
>>>>>>> `Plugins/Filter/vtkMyElevationFilterClientServer.cxx'. Stop.
>>>>>>> gmake[5]: Leaving directory
>>>>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>>>> gmake[4]: *** [Plugins/Filter/CMakeFiles/SMMyElevation.dir/all]
>>>>>>> Error 2
>>>>>>> gmake[4]: Leaving directory
>>>>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>>>> gmake[3]: *** [all] Error 2
>>>>>>> gmake[3]: Leaving directory
>>>>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>>>> make[2]: *** [ParaViewExamples.done] Error 1
>>>>>>> make[1]: *** [CMakeFiles/ParaViewExamples.dir/all] Error 2
>>>>>>> make: *** [all] Error 2
>>>>>>>
>>>>>>> _______________________________________________
>>>>>>> Powered by www.kitware.com
>>>>>>>
>>>>>>> Visit other Kitware open-source projects at
>>>>>>> http://www.kitware.com/opensource/opensource.html
>>>>>>>
>>>>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>>>>> http://paraview.org/Wiki/ParaView
>>>>>>>
>>>>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>>>>
>>>>>>> Follow this link to subscribe/unsubscribe:
>>>>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>> _______________________________________________
>>>>>> Powered by www.kitware.com
>>>>>>
>>>>>> Visit other Kitware open-source projects at
>>>>>> http://www.kitware.com/opensource/opensource.html
>>>>>>
>>>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>>>> http://paraview.org/Wiki/ParaView
>>>>>>
>>>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>>>
>>>>>> Follow this link to subscribe/unsubscribe:
>>>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>>>
>>>>>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>
>
>
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From jeffrey.c.becker at nasa.gov Mon Jan 12 18:22:40 2015
From: jeffrey.c.becker at nasa.gov (Jeff Becker)
Date: Mon, 12 Jan 2015 15:22:40 -0800
Subject: [Paraview] problem building ParaView Examples
In-Reply-To: <CABObKxcNhpxksiBFHSwCbtSWBfVQoM46dSOGeGOxjXh4_V+NQg@mail.gmail.com>
References: <54B03E09.2060507@nasa.gov> <CADHSJjBmOMcLn9SbRTqSZNs83GhmnGGmg-L6zgk-=6BvUfHj-Q@mail.gmail.com> <54B416B4.8020208@nasa.gov> <54B42260.4040501@nasa.gov> <CADHSJjC1g_ybTTYf0euHYP+DbsWcQNVFUPnwAFAL4sVavg+a1g@mail.gmail.com> <54B43C93.2040001@nasa.gov> <CADHSJjA7E2iDA2x7a9+q52EHG4=MQy4-bfG_92dSBvdTTT=igw@mail.gmail.com> <54B440C9.1050708@nasa.gov> <CABObKxc4xehT8+nq5OjbRqG+WmtUqWrwkXmfnYZmVpW2Q4L+pg@mail.gmail.com> <54B44FD9.1090906@nasa.gov>
<CABObKxcNhpxksiBFHSwCbtSWBfVQoM46dSOGeGOxjXh4_V+NQg@mail.gmail.com>
Message-ID: <54B45740.9010102@nasa.gov>
On 01/12/2015 03:18 PM, Sebastien Jourdain wrote:
> Hum,
>
> That should not really matter root or no-root. But since lot of test
> perform some rendering operations and that we capture that section of
> the screen, we often (on wrongly setup dashboard) see screensaver
> capture instead of the user desktop where the expected rendering is
> actually happening. (Hence my previous comment) Such error provide
> false positive error.
>
> And looking at several tests here:
> https://open.cdash.org/viewTest.php?onlyfailed&buildid=3650082
> I've notice the same captured image.
>
> When you run "ctest -D Experimental", do you see flashing windows
> poping up with that image?
> Or do they seems to be somewhat valid?
> If you try again, try to see if you can disable the screensaver
> altogether.
OK - Now I think I know what happened. I started the test and went to
lunch. Hence my screen locked, and that may have interfered. I'll run it
again and watch it. Thanks.
-jeff
>
> Seb
>
>
> On Mon, Jan 12, 2015 at 3:51 PM, Jeff Becker
> <jeffrey.c.becker at nasa.gov <mailto:jeffrey.c.becker at nasa.gov>> wrote:
>
> On 01/12/2015 02:38 PM, Sebastien Jourdain wrote:
>> Do you know if that picture come from your screensaver or
>> anything else?
>> It seems to be the picture that get captured regardless of the
>> test that ran and failed.
>>
> I don't recognize it.
>
> I was thinking that it might be a permission issue. I could try
> running the tests as root.... Would that help? Thanks.
>
> -jeff
>
>
>>
>>
>> On Mon, Jan 12, 2015 at 2:46 PM, Jeff Becker
>> <jeffrey.c.becker at nasa.gov <mailto:jeffrey.c.becker at nasa.gov>> wrote:
>>
>> On 01/12/2015 01:38 PM, Utkarsh Ayachit wrote:
>>
>> That's more from before! :).
>>
>>
>> I assume you meant more "than" before?
>>
>> Anything funky about the X configuration?
>>
>>
>> What should I look for?
>>
>> Looks like the framebuffer grabs end up capturing ghost
>> images.
>>
>>
>> -jeff
>>
>>
>> Utkarsh
>>
>> On Mon, Jan 12, 2015 at 1:28 PM, Jeff Becker
>> <jeffrey.c.becker at nasa.gov
>> <mailto:jeffrey.c.becker at nasa.gov>> wrote:
>>
>> On 01/12/2015 11:39 AM, Utkarsh Ayachit wrote:
>>
>> Mind doing a "ctest -D Experimental"? That'll
>> submit the test results
>> to the ParaView dashboard [1] and will provide
>> use more information as
>> to why those tests failed.
>>
>>
>> Done. 996 tests failed (see website below). Thanks.
>>
>> -jeff
>>
>> [1] https://open.cdash.org/index.php?project=ParaView
>>
>> On Mon, Jan 12, 2015 at 11:37 AM, Jeff Becker
>> <jeffrey.c.becker at nasa.gov
>> <mailto:jeffrey.c.becker at nasa.gov>>
>> wrote:
>>
>> On 01/12/2015 10:47 AM, Jeff Becker wrote:
>>
>> On 01/10/2015 04:39 PM, Utkarsh Ayachit wrote:
>>
>> Not sure what's the issue. I tested out in my
>> build and seems to work as
>> expected. Mind attaching your CMakeCache.txt
>> file? Did you by any chance
>> turn on PARAVIEW_USE_UNIFIED_BINDINGS cmake flag?
>>
>>
>> Yes. I turned that off, and now it builds
>> fine. Thanks.
>>
>>
>> I tried 'make test' and got:
>>
>> 97% tests passed, 47 tests failed out of 1499
>>
>> Failed tests listed below. Do I need to worry
>> about these, and if so, how
>> to
>> fix?
>>
>> Thanks.
>>
>> -jeff
>>
>> The following tests FAILED:
>> 1 - pv.TestDevelopmentInstall (Failed)
>> 73 -
>> vtkPVVTKExtensionsDefault-HeaderTest (Failed)
>> 688 -
>> vtkIONetCDFPython-NetCDFCF2DBounds (Failed)
>> 779 -
>> vtkPVServerManagerDefaultPython-MultiView
>> (Failed)
>> 786 -
>> vtkPVServerManagerDefaultPython-SymmetricMultiView
>> (Failed)
>> 1026 -
>> vtkRenderingVolumeCxx-TestGPUVolumeRayCastMapperWindowLevel
>> (Failed)
>> 1103 - pv.FileSeries (Failed)
>> 1104 - pv.HistogramSelection (Failed)
>> 1119 - pv.FindDataDialog (Failed)
>> 1136 - pv.AnimatePipelineTime (Failed)
>> 1140 - pv.CameraLink (Failed)
>> 1142 - pv.CheckableHeader (Failed)
>> 1165 - pv.FFTOverTime (Failed)
>> 1178 - pv.NormalGlyphs (Failed)
>> 1186 - pv.PlotOverTimeAutoApply (Failed)
>> 1211 - pv.TemporalInterpolator (Failed)
>> 1218 - pv.UndoRedo2 (Failed)
>> 1230 - pv.SelectionLabels (Failed)
>> 1234 - pv.TraceSupplementalProxiesFully
>> (Failed)
>> 1252 - pvcs.CameraLink (Failed)
>> 1254 - pvcs.CheckableHeader (Failed)
>> 1275 - pvcs.FFTOverTime (Failed)
>> 1279 - pvcs.ImageVolumeRendering (Failed)
>> 1293 - pvcs.PlotOverTimeAutoApply (Failed)
>> 1301 - pvcs.PropertyLink (Failed)
>> 1317 - pvcs.TensorGlyph (Failed)
>> 1318 - pvcs.TemporalInterpolator (Failed)
>> 1325 - pvcs.UndoRedo2 (Failed)
>> 1340 -
>> pvcs.TraceSupplementalProxiesFully (Failed)
>> 1346 - pvcs.HistogramSelection (Failed)
>> 1351 - pvcs.NonlinearSubdivisionDisplay
>> (Failed)
>> 1360 - pvcs.FindDataDialog (Failed)
>> 1376 - pvcrs.CameraLink (Failed)
>> 1378 - pvcrs.CheckableHeader (Failed)
>> 1384 - pvcrs.ComparativeVisPanel (Failed)
>> 1415 - pvcrs.PropertyLink (Failed)
>> 1418 - pvcrs.RepresentationSelector
>> (Failed)
>> 1420 - pvcrs.SaveCSV (Failed)
>> 1422 - pvcrs.SimpleInteraction (Failed)
>> 1424 - pvcrs.SliceAlongPolyline (Failed)
>> 1426 - pvcrs.SpreadSheet2 (Failed)
>> 1430 - pvcrs.TabbedViews (Failed)
>> 1432 - pvcrs.TemporalInterpolator (Failed)
>> 1439 - pvcrs.UndoRedo2 (Failed)
>> 1453 -
>> pvcrs.TraceSupplementalProxiesFully (Failed)
>> 1458 - pvcrs.HistogramSelection (Failed)
>> 1469 - pvcrs.FindDataDialog (Failed)
>> Errors while running CTest
>> make: *** [test] Error 8
>>
>>
>>
>>
>> -jeff
>>
>>
>> Utkarsh
>>
>> On Fri, Jan 9, 2015 at 3:46 PM, Jeff Becker
>> <jeffrey.c.becker at nasa.gov
>> <mailto:jeffrey.c.becker at nasa.gov>>
>> wrote:
>>
>> Almost there - make output below. Any
>> ideas? Thanks.
>>
>> -jeff
>>
>> Scanning dependencies of target
>> ParaViewExamples
>> [ 80%] Build examples as a separate project
>> Not searching for unused variables given
>> on the command line.
>> Not searching for unused variables given
>> on the command line.
>> Internal cmake changing into directory:
>> /u/wk/jcbecker/ParaView-build/Examples/All
>> ======== CMake output ======
>> The C compiler identification is GNU 4.4.7
>> The CXX compiler identification is GNU 4.4.7
>> Check for working C compiler: /usr/bin/cc
>> Configuring
>> Check for working C compiler: /usr/bin/cc
>> -- works
>> Detecting C compiler ABI info
>> Configuring
>> Detecting C compiler ABI info - done
>> Check for working CXX compiler: /usr/bin/c++
>> Configuring
>> Check for working CXX compiler:
>> /usr/bin/c++ -- works
>> Detecting CXX compiler ABI info
>> Configuring
>> Detecting CXX compiler ABI info - done
>> Looking for Q_WS_X11
>> Configuring
>> Looking for Q_WS_X11 - found
>> Looking for Q_WS_WIN
>> Configuring
>> Looking for Q_WS_WIN - not found
>> Looking for Q_WS_QWS
>> Configuring
>> Looking for Q_WS_QWS - not found
>> Looking for Q_WS_MAC
>> Configuring
>> Looking for Q_WS_MAC - not found
>> Found Qt4:
>> /usr/local/Trolltech/Qt-4.8.6/bin/qmake
>> (found version
>> "4.8.6")
>> Configuring
>> Found Qt4:
>> /usr/local/Trolltech/Qt-4.8.6/bin/qmake
>> (found version
>> "4.8.6")
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
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>> Configuring
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>> Configuring done
>> Generating
>> Generating
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>> Generating
>> Generating
>> Generating
>> Generating
>> Generating done
>> Build files have been written to:
>> /u/wk/jcbecker/ParaView-build/Examples/All
>> Found Qt4:
>> /usr/local/Trolltech/Qt-4.8.6/bin/qmake
>> (found version
>> "4.8.6")
>> Configuring
>> Found Qt4:
>> /usr/local/Trolltech/Qt-4.8.6/bin/qmake
>> (found version
>> "4.8.6")
>> Configuring
>> Configuring
>> Configuring
>> Configuring
>> Configuring
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>> Configuring done
>> Generating
>> Generating
>> Generating
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>> Generating
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>> Generating
>> Generating
>> Generating
>> Generating
>> Generating done
>> Build files have been written to:
>> /u/wk/jcbecker/ParaView-build/Examples/All
>> ======== End CMake output ======
>> Change Dir:
>> /u/wk/jcbecker/ParaView-build/Examples/All
>>
>> Run Build Command:/usr/bin/gmake
>> gmake[3]: Entering directory
>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>> gmake[4]: Entering directory
>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>> gmake[5]: Entering directory
>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>> [ 1%] Generating Documentation HTMLs
>> from xmls
>> Processing wiki sources
>> Processing wiki filters
>> Processing wiki writers
>> Processing wiki readers
>> [ 1%] Compiling Qt help project
>> SMMyElevation.qhp
>> Building up file structure...
>> Insert custom filters...
>> Insert help data for filter section (1 of
>> 1)...
>> Insert files...
>> Warning: The file
>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.css
>> does
>> not
>> exist! Skipping it.
>> Warning: The file
>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.png
>> does
>> not
>> exist! Skipping it.
>> Warning: The file
>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.jpg
>> does
>> not
>> exist! Skipping it.
>> Insert contents...
>> Insert indices...
>> Documentation successfully generated.
>> [ 2%] Generating SMMyElevation_doc.h
>> -- Generate module: SMMyElevation
>> gmake[5]: *** No rule to make target
>> `/u/wk/jcbecker/ParaView-build/bin/vtkWrapClientServer-pv4.3',
>> needed by
>> `Plugins/Filter/vtkMyElevationFilterClientServer.cxx'.
>> Stop.
>> gmake[5]: Leaving directory
>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>> gmake[4]: ***
>> [Plugins/Filter/CMakeFiles/SMMyElevation.dir/all]
>> Error 2
>> gmake[4]: Leaving directory
>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>> gmake[3]: *** [all] Error 2
>> gmake[3]: Leaving directory
>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>> make[2]: *** [ParaViewExamples.done] Error 1
>> make[1]: ***
>> [CMakeFiles/ParaViewExamples.dir/all] Error 2
>> make: *** [all] Error 2
>>
>> _______________________________________________
>> Powered by www.kitware.com
>> <http://www.kitware.com>
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check
>> the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at:
>> http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>>
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>> <http://www.kitware.com>
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the
>> ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at:
>> http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com <http://www.kitware.com>
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at:
>> http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>
>
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From jeffrey.c.becker at nasa.gov Mon Jan 12 19:11:33 2015
From: jeffrey.c.becker at nasa.gov (Jeff Becker)
Date: Mon, 12 Jan 2015 16:11:33 -0800
Subject: [Paraview] problem building ParaView Examples
In-Reply-To: <54B45740.9010102@nasa.gov>
References: <54B03E09.2060507@nasa.gov> <CADHSJjBmOMcLn9SbRTqSZNs83GhmnGGmg-L6zgk-=6BvUfHj-Q@mail.gmail.com> <54B416B4.8020208@nasa.gov> <54B42260.4040501@nasa.gov> <CADHSJjC1g_ybTTYf0euHYP+DbsWcQNVFUPnwAFAL4sVavg+a1g@mail.gmail.com> <54B43C93.2040001@nasa.gov> <CADHSJjA7E2iDA2x7a9+q52EHG4=MQy4-bfG_92dSBvdTTT=igw@mail.gmail.com> <54B440C9.1050708@nasa.gov> <CABObKxc4xehT8+nq5OjbRqG+WmtUqWrwkXmfnYZmVpW2Q4L+pg@mail.gmail.com> <54B44FD9.1090906@nasa.gov>
<CABObKxcNhpxksiBFHSwCbtSWBfVQoM46dSOGeGOxjXh4_V+NQg@mail.gmail.com>
<54B45740.9010102@nasa.gov>
Message-ID: <54B462B5.4060806@nasa.gov>
Resubmitted "ctest -D Experimental"
On 01/12/2015 03:22 PM, Jeff Becker wrote:
> On 01/12/2015 03:18 PM, Sebastien Jourdain wrote:
>> Hum,
>>
>> That should not really matter root or no-root. But since lot of test
>> perform some rendering operations and that we capture that section of
>> the screen, we often (on wrongly setup dashboard) see screensaver
>> capture instead of the user desktop where the expected rendering is
>> actually happening. (Hence my previous comment) Such error provide
>> false positive error.
>>
>> And looking at several tests here:
>> https://open.cdash.org/viewTest.php?onlyfailed&buildid=3650082
>> I've notice the same captured image.
>>
>> When you run "ctest -D Experimental", do you see flashing windows
>> poping up with that image?
>> Or do they seems to be somewhat valid?
>> If you try again, try to see if you can disable the screensaver
>> altogether.
>
> OK - Now I think I know what happened. I started the test and went to
> lunch. Hence my screen locked, and that may have interfered. I'll run
> it again and watch it. Thanks.
>
> -jeff
>
>>
>> Seb
>>
>>
>> On Mon, Jan 12, 2015 at 3:51 PM, Jeff Becker
>> <jeffrey.c.becker at nasa.gov <mailto:jeffrey.c.becker at nasa.gov>> wrote:
>>
>> On 01/12/2015 02:38 PM, Sebastien Jourdain wrote:
>>> Do you know if that picture come from your screensaver or
>>> anything else?
>>> It seems to be the picture that get captured regardless of the
>>> test that ran and failed.
>>>
>> I don't recognize it.
>>
>> I was thinking that it might be a permission issue. I could try
>> running the tests as root.... Would that help? Thanks.
>>
>> -jeff
>>
>>
>>>
>>>
>>> On Mon, Jan 12, 2015 at 2:46 PM, Jeff Becker
>>> <jeffrey.c.becker at nasa.gov <mailto:jeffrey.c.becker at nasa.gov>>
>>> wrote:
>>>
>>> On 01/12/2015 01:38 PM, Utkarsh Ayachit wrote:
>>>
>>> That's more from before! :).
>>>
>>>
>>> I assume you meant more "than" before?
>>>
>>> Anything funky about the X configuration?
>>>
>>>
>>> What should I look for?
>>>
>>> Looks like the framebuffer grabs end up capturing ghost
>>> images.
>>>
>>>
>>> -jeff
>>>
>>>
>>> Utkarsh
>>>
>>> On Mon, Jan 12, 2015 at 1:28 PM, Jeff Becker
>>> <jeffrey.c.becker at nasa.gov
>>> <mailto:jeffrey.c.becker at nasa.gov>> wrote:
>>>
>>> On 01/12/2015 11:39 AM, Utkarsh Ayachit wrote:
>>>
>>> Mind doing a "ctest -D Experimental"? That'll
>>> submit the test results
>>> to the ParaView dashboard [1] and will provide
>>> use more information as
>>> to why those tests failed.
>>>
>>>
>>> Done. 996 tests failed (see website below). Thanks.
>>>
>>> -jeff
>>>
>>> [1]
>>> https://open.cdash.org/index.php?project=ParaView
>>>
>>> On Mon, Jan 12, 2015 at 11:37 AM, Jeff Becker
>>> <jeffrey.c.becker at nasa.gov
>>> <mailto:jeffrey.c.becker at nasa.gov>>
>>> wrote:
>>>
>>> On 01/12/2015 10:47 AM, Jeff Becker wrote:
>>>
>>> On 01/10/2015 04:39 PM, Utkarsh Ayachit wrote:
>>>
>>> Not sure what's the issue. I tested out in
>>> my build and seems to work as
>>> expected. Mind attaching your CMakeCache.txt
>>> file? Did you by any chance
>>> turn on PARAVIEW_USE_UNIFIED_BINDINGS cmake
>>> flag?
>>>
>>>
>>> Yes. I turned that off, and now it builds
>>> fine. Thanks.
>>>
>>>
>>> I tried 'make test' and got:
>>>
>>> 97% tests passed, 47 tests failed out of 1499
>>>
>>> Failed tests listed below. Do I need to
>>> worry about these, and if so, how
>>> to
>>> fix?
>>>
>>> Thanks.
>>>
>>> -jeff
>>>
>>> The following tests FAILED:
>>> 1 - pv.TestDevelopmentInstall (Failed)
>>> 73 -
>>> vtkPVVTKExtensionsDefault-HeaderTest (Failed)
>>> 688 -
>>> vtkIONetCDFPython-NetCDFCF2DBounds (Failed)
>>> 779 -
>>> vtkPVServerManagerDefaultPython-MultiView
>>> (Failed)
>>> 786 -
>>> vtkPVServerManagerDefaultPython-SymmetricMultiView
>>> (Failed)
>>> 1026 -
>>> vtkRenderingVolumeCxx-TestGPUVolumeRayCastMapperWindowLevel
>>> (Failed)
>>> 1103 - pv.FileSeries (Failed)
>>> 1104 - pv.HistogramSelection (Failed)
>>> 1119 - pv.FindDataDialog (Failed)
>>> 1136 - pv.AnimatePipelineTime (Failed)
>>> 1140 - pv.CameraLink (Failed)
>>> 1142 - pv.CheckableHeader (Failed)
>>> 1165 - pv.FFTOverTime (Failed)
>>> 1178 - pv.NormalGlyphs (Failed)
>>> 1186 - pv.PlotOverTimeAutoApply (Failed)
>>> 1211 - pv.TemporalInterpolator (Failed)
>>> 1218 - pv.UndoRedo2 (Failed)
>>> 1230 - pv.SelectionLabels (Failed)
>>> 1234 -
>>> pv.TraceSupplementalProxiesFully (Failed)
>>> 1252 - pvcs.CameraLink (Failed)
>>> 1254 - pvcs.CheckableHeader (Failed)
>>> 1275 - pvcs.FFTOverTime (Failed)
>>> 1279 - pvcs.ImageVolumeRendering (Failed)
>>> 1293 - pvcs.PlotOverTimeAutoApply (Failed)
>>> 1301 - pvcs.PropertyLink (Failed)
>>> 1317 - pvcs.TensorGlyph (Failed)
>>> 1318 - pvcs.TemporalInterpolator (Failed)
>>> 1325 - pvcs.UndoRedo2 (Failed)
>>> 1340 -
>>> pvcs.TraceSupplementalProxiesFully (Failed)
>>> 1346 - pvcs.HistogramSelection (Failed)
>>> 1351 -
>>> pvcs.NonlinearSubdivisionDisplay (Failed)
>>> 1360 - pvcs.FindDataDialog (Failed)
>>> 1376 - pvcrs.CameraLink (Failed)
>>> 1378 - pvcrs.CheckableHeader (Failed)
>>> 1384 - pvcrs.ComparativeVisPanel (Failed)
>>> 1415 - pvcrs.PropertyLink (Failed)
>>> 1418 - pvcrs.RepresentationSelector
>>> (Failed)
>>> 1420 - pvcrs.SaveCSV (Failed)
>>> 1422 - pvcrs.SimpleInteraction (Failed)
>>> 1424 - pvcrs.SliceAlongPolyline (Failed)
>>> 1426 - pvcrs.SpreadSheet2 (Failed)
>>> 1430 - pvcrs.TabbedViews (Failed)
>>> 1432 - pvcrs.TemporalInterpolator (Failed)
>>> 1439 - pvcrs.UndoRedo2 (Failed)
>>> 1453 -
>>> pvcrs.TraceSupplementalProxiesFully (Failed)
>>> 1458 - pvcrs.HistogramSelection (Failed)
>>> 1469 - pvcrs.FindDataDialog (Failed)
>>> Errors while running CTest
>>> make: *** [test] Error 8
>>>
>>>
>>>
>>>
>>> -jeff
>>>
>>>
>>> Utkarsh
>>>
>>> On Fri, Jan 9, 2015 at 3:46 PM, Jeff Becker
>>> <jeffrey.c.becker at nasa.gov
>>> <mailto:jeffrey.c.becker at nasa.gov>>
>>> wrote:
>>>
>>> Almost there - make output below. Any
>>> ideas? Thanks.
>>>
>>> -jeff
>>>
>>> Scanning dependencies of target
>>> ParaViewExamples
>>> [ 80%] Build examples as a separate project
>>> Not searching for unused variables given
>>> on the command line.
>>> Not searching for unused variables given
>>> on the command line.
>>> Internal cmake changing into directory:
>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>> ======== CMake output ======
>>> The C compiler identification is GNU 4.4.7
>>> The CXX compiler identification is GNU 4.4.7
>>> Check for working C compiler: /usr/bin/cc
>>> Configuring
>>> Check for working C compiler:
>>> /usr/bin/cc -- works
>>> Detecting C compiler ABI info
>>> Configuring
>>> Detecting C compiler ABI info - done
>>> Check for working CXX compiler: /usr/bin/c++
>>> Configuring
>>> Check for working CXX compiler:
>>> /usr/bin/c++ -- works
>>> Detecting CXX compiler ABI info
>>> Configuring
>>> Detecting CXX compiler ABI info - done
>>> Looking for Q_WS_X11
>>> Configuring
>>> Looking for Q_WS_X11 - found
>>> Looking for Q_WS_WIN
>>> Configuring
>>> Looking for Q_WS_WIN - not found
>>> Looking for Q_WS_QWS
>>> Configuring
>>> Looking for Q_WS_QWS - not found
>>> Looking for Q_WS_MAC
>>> Configuring
>>> Looking for Q_WS_MAC - not found
>>> Found Qt4:
>>> /usr/local/Trolltech/Qt-4.8.6/bin/qmake
>>> (found version
>>> "4.8.6")
>>> Configuring
>>> Found Qt4:
>>> /usr/local/Trolltech/Qt-4.8.6/bin/qmake
>>> (found version
>>> "4.8.6")
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
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>>> Configuring
>>> Configuring
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>>> Configuring
>>> Configuring
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>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring done
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating done
>>> Build files have been written to:
>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>> Found Qt4:
>>> /usr/local/Trolltech/Qt-4.8.6/bin/qmake
>>> (found version
>>> "4.8.6")
>>> Configuring
>>> Found Qt4:
>>> /usr/local/Trolltech/Qt-4.8.6/bin/qmake
>>> (found version
>>> "4.8.6")
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
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>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring
>>> Configuring done
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
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>>> Generating
>>> Generating
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>>> Generating
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>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating
>>> Generating done
>>> Build files have been written to:
>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>> ======== End CMake output ======
>>> Change Dir:
>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>
>>> Run Build Command:/usr/bin/gmake
>>> gmake[3]: Entering directory
>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>> gmake[4]: Entering directory
>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>> gmake[5]: Entering directory
>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>> [ 1%] Generating Documentation HTMLs
>>> from xmls
>>> Processing wiki sources
>>> Processing wiki filters
>>> Processing wiki writers
>>> Processing wiki readers
>>> [ 1%] Compiling Qt help project
>>> SMMyElevation.qhp
>>> Building up file structure...
>>> Insert custom filters...
>>> Insert help data for filter section (1
>>> of 1)...
>>> Insert files...
>>> Warning: The file
>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.css
>>> does
>>> not
>>> exist! Skipping it.
>>> Warning: The file
>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.png
>>> does
>>> not
>>> exist! Skipping it.
>>> Warning: The file
>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.jpg
>>> does
>>> not
>>> exist! Skipping it.
>>> Insert contents...
>>> Insert indices...
>>> Documentation successfully generated.
>>> [ 2%] Generating SMMyElevation_doc.h
>>> -- Generate module: SMMyElevation
>>> gmake[5]: *** No rule to make target
>>> `/u/wk/jcbecker/ParaView-build/bin/vtkWrapClientServer-pv4.3',
>>> needed by
>>> `Plugins/Filter/vtkMyElevationFilterClientServer.cxx'.
>>> Stop.
>>> gmake[5]: Leaving directory
>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>> gmake[4]: ***
>>> [Plugins/Filter/CMakeFiles/SMMyElevation.dir/all]
>>> Error 2
>>> gmake[4]: Leaving directory
>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>> gmake[3]: *** [all] Error 2
>>> gmake[3]: Leaving directory
>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>> make[2]: *** [ParaViewExamples.done] Error 1
>>> make[1]: ***
>>> [CMakeFiles/ParaViewExamples.dir/all]
>>> Error 2
>>> make: *** [all] Error 2
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>> <http://www.kitware.com>
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check
>>> the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at:
>>> http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>>>
>>>
>>>
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>> <http://www.kitware.com>
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the
>>> ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at:
>>> http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com <http://www.kitware.com>
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki
>>> at: http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at:
>>> http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>>>
>>
>>
>
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From wascott at sandia.gov Mon Jan 12 21:48:54 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Tue, 13 Jan 2015 02:48:54 +0000
Subject: [Paraview] Volume and the Find Data or Calculator
Message-ID: <9d01f292c24e4754b69e312499249019@ES05AMSNLNT.srn.sandia.gov>
Is it possible to find the volume of each cell, and create a new variable with this information?
Thanks,
Alan
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From utkarsh.ayachit at kitware.com Mon Jan 12 21:54:26 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Mon, 12 Jan 2015 18:54:26 -0800
Subject: [Paraview] Volume and the Find Data or Calculator
In-Reply-To: <9d01f292c24e4754b69e312499249019@ES05AMSNLNT.srn.sandia.gov>
References: <9d01f292c24e4754b69e312499249019@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <CADHSJjBx7rrpsGA6sCRuWwT5QaOgG=+CiJo1659is47thqyySg@mail.gmail.com>
Try "volume(inputs[0])" as the expression for Python calculator to
compute a "Cell Data" result. That should give you volume for each
cell in the dataset.
On Mon, Jan 12, 2015 at 6:48 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> Is it possible to find the volume of each cell, and create a new variable
> with this information?
>
> Thanks,
>
> Alan
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
From wascott at sandia.gov Mon Jan 12 22:34:44 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Tue, 13 Jan 2015 03:34:44 +0000
Subject: [Paraview] [EXTERNAL] Re: Volume and the Find Data or Calculator
In-Reply-To: <CADHSJjBx7rrpsGA6sCRuWwT5QaOgG=+CiJo1659is47thqyySg@mail.gmail.com>
References: <9d01f292c24e4754b69e312499249019@ES05AMSNLNT.srn.sandia.gov>
<CADHSJjBx7rrpsGA6sCRuWwT5QaOgG=+CiJo1659is47thqyySg@mail.gmail.com>
Message-ID: <a5bc299eb95f442e90536f6932dce64d@ES05AMSNLNT.srn.sandia.gov>
Sweet! Thanks, I have been asked for that for ages.
So, why isn't that natively in the GUI calculator? Is the calculator where it belongs? Mind if I add a feature request, targeted for 4.4?
Alan
-----Original Message-----
From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
Sent: Monday, January 12, 2015 7:54 PM
To: Scott, W Alan
Cc: paraview at paraview.org
Subject: [EXTERNAL] Re: [Paraview] Volume and the Find Data or Calculator
Try "volume(inputs[0])" as the expression for Python calculator to compute a "Cell Data" result. That should give you volume for each cell in the dataset.
On Mon, Jan 12, 2015 at 6:48 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> Is it possible to find the volume of each cell, and create a new
> variable with this information?
>
> Thanks,
>
> Alan
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
From utkarsh.ayachit at kitware.com Tue Jan 13 08:19:26 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Tue, 13 Jan 2015 05:19:26 -0800
Subject: [Paraview] ANN: ParaView 4.3.0-RC1 now available for download
In-Reply-To: <186F8606-C75E-4BBD-80C0-647142D1940F@kitware.com>
References: <CADHSJjDM1sJzJceDKjNyc7itMe6PyLPotnfaToxq2A_vGBntMA@mail.gmail.com>
<186F8606-C75E-4BBD-80C0-647142D1940F@kitware.com>
Message-ID: <CADHSJjAdyepZSY5jF0daXDf5LMJ1GHFq_OOK4DmK=1gsNE2d=Q@mail.gmail.com>
David,
On Linux, it is supported. You can turn on
"PARAVIEW_INSTALL_DEVELOPMENT_FILES", then you can build off a install
tree.
It isn't currently fully supported/tested on Mac and Windows.
Utkarsh
On Mon, Jan 12, 2015 at 1:41 PM, David Thompson
<david.thompson at kitware.com> wrote:
> Hi Utkarsh,
>
>> To get the year started, we have the ParaView 4.3.0, Release Candidate 1 binaries available for download [1]. ...
>
>
> Will it be possible to build branded ParaView applications from an *installed* version of ParaView 4.3 instead of requiring a build directory? I haven't been able to find a bug in the tracker for this.
>
> Thanks,
> David
From sebastien.jourdain at kitware.com Tue Jan 13 10:45:58 2015
From: sebastien.jourdain at kitware.com (Sebastien Jourdain)
Date: Tue, 13 Jan 2015 08:45:58 -0700
Subject: [Paraview] problem building ParaView Examples
In-Reply-To: <54B462B5.4060806@nasa.gov>
References: <54B03E09.2060507@nasa.gov>
<CADHSJjBmOMcLn9SbRTqSZNs83GhmnGGmg-L6zgk-=6BvUfHj-Q@mail.gmail.com>
<54B416B4.8020208@nasa.gov> <54B42260.4040501@nasa.gov>
<CADHSJjC1g_ybTTYf0euHYP+DbsWcQNVFUPnwAFAL4sVavg+a1g@mail.gmail.com>
<54B43C93.2040001@nasa.gov>
<CADHSJjA7E2iDA2x7a9+q52EHG4=MQy4-bfG_92dSBvdTTT=igw@mail.gmail.com>
<54B440C9.1050708@nasa.gov>
<CABObKxc4xehT8+nq5OjbRqG+WmtUqWrwkXmfnYZmVpW2Q4L+pg@mail.gmail.com>
<54B44FD9.1090906@nasa.gov>
<CABObKxcNhpxksiBFHSwCbtSWBfVQoM46dSOGeGOxjXh4_V+NQg@mail.gmail.com>
<54B45740.9010102@nasa.gov> <54B462B5.4060806@nasa.gov>
Message-ID: <CABObKxdKw+ZPu9yt+7hdR6siQQzHVXzz6dbKLgKe=dd66bx9Cg@mail.gmail.com>
Hi Jeff,
looking at your test here:
https://open.cdash.org/viewTest.php?onlyfailed&buildid=3650142
It seems much better. Some of the tests still fail as another window went
on top (terminal or web browser).
And some other failures seems to be related to a zoom factor which was
different.
Base on what I've seen, your ParaView seems OK.
Although, I'm wondering if you have the proper set of OpenGL drivers.
That test show for example some differences in term of quality.
=> https://open.cdash.org/testDetails.php?test=306359279&build=3650142
But as far as I can tell, you seems to be all set.
Seb
On Mon, Jan 12, 2015 at 5:11 PM, Jeff Becker <jeffrey.c.becker at nasa.gov>
wrote:
> Resubmitted "ctest -D Experimental"
>
>
> On 01/12/2015 03:22 PM, Jeff Becker wrote:
>
> On 01/12/2015 03:18 PM, Sebastien Jourdain wrote:
>
> Hum,
>
> That should not really matter root or no-root. But since lot of test
> perform some rendering operations and that we capture that section of the
> screen, we often (on wrongly setup dashboard) see screensaver capture
> instead of the user desktop where the expected rendering is actually
> happening. (Hence my previous comment) Such error provide false positive
> error.
>
> And looking at several tests here:
> https://open.cdash.org/viewTest.php?onlyfailed&buildid=3650082
> I've notice the same captured image.
>
> When you run "ctest -D Experimental", do you see flashing windows
> poping up with that image?
> Or do they seems to be somewhat valid?
> If you try again, try to see if you can disable the screensaver
> altogether.
>
>
> OK - Now I think I know what happened. I started the test and went to
> lunch. Hence my screen locked, and that may have interfered. I'll run it
> again and watch it. Thanks.
>
> -jeff
>
>
> Seb
>
>
> On Mon, Jan 12, 2015 at 3:51 PM, Jeff Becker <jeffrey.c.becker at nasa.gov>
> wrote:
>
>> On 01/12/2015 02:38 PM, Sebastien Jourdain wrote:
>>
>> Do you know if that picture come from your screensaver or anything
>> else?
>> It seems to be the picture that get captured regardless of the test
>> that ran and failed.
>>
>> I don't recognize it.
>>
>> I was thinking that it might be a permission issue. I could try running
>> the tests as root.... Would that help? Thanks.
>>
>> -jeff
>>
>>
>>
>>
>> On Mon, Jan 12, 2015 at 2:46 PM, Jeff Becker <jeffrey.c.becker at nasa.gov>
>> wrote:
>>
>>> On 01/12/2015 01:38 PM, Utkarsh Ayachit wrote:
>>>
>>>> That's more from before! :).
>>>>
>>>
>>> I assume you meant more "than" before?
>>>
>>> Anything funky about the X configuration?
>>>>
>>>
>>> What should I look for?
>>>
>>>> Looks like the framebuffer grabs end up capturing ghost images.
>>>>
>>>
>>> -jeff
>>>
>>>
>>>> Utkarsh
>>>>
>>>> On Mon, Jan 12, 2015 at 1:28 PM, Jeff Becker <jeffrey.c.becker at nasa.gov>
>>>> wrote:
>>>>
>>>>> On 01/12/2015 11:39 AM, Utkarsh Ayachit wrote:
>>>>>
>>>>>> Mind doing a "ctest -D Experimental"? That'll submit the test results
>>>>>> to the ParaView dashboard [1] and will provide use more information as
>>>>>> to why those tests failed.
>>>>>>
>>>>>
>>>>> Done. 996 tests failed (see website below). Thanks.
>>>>>
>>>>> -jeff
>>>>>
>>>>> [1] https://open.cdash.org/index.php?project=ParaView
>>>>>>
>>>>>> On Mon, Jan 12, 2015 at 11:37 AM, Jeff Becker <
>>>>>> jeffrey.c.becker at nasa.gov>
>>>>>> wrote:
>>>>>>
>>>>>>> On 01/12/2015 10:47 AM, Jeff Becker wrote:
>>>>>>>
>>>>>>> On 01/10/2015 04:39 PM, Utkarsh Ayachit wrote:
>>>>>>>
>>>>>>> Not sure what's the issue. I tested out in my build and seems to
>>>>>>> work as
>>>>>>> expected. Mind attaching your CMakeCache.txt file? Did you by any
>>>>>>> chance
>>>>>>> turn on PARAVIEW_USE_UNIFIED_BINDINGS cmake flag?
>>>>>>>
>>>>>>>
>>>>>>> Yes. I turned that off, and now it builds fine. Thanks.
>>>>>>>
>>>>>>>
>>>>>>> I tried 'make test' and got:
>>>>>>>
>>>>>>> 97% tests passed, 47 tests failed out of 1499
>>>>>>>
>>>>>>> Failed tests listed below. Do I need to worry about these, and if
>>>>>>> so, how
>>>>>>> to
>>>>>>> fix?
>>>>>>>
>>>>>>> Thanks.
>>>>>>>
>>>>>>> -jeff
>>>>>>>
>>>>>>> The following tests FAILED:
>>>>>>> 1 - pv.TestDevelopmentInstall (Failed)
>>>>>>> 73 - vtkPVVTKExtensionsDefault-HeaderTest (Failed)
>>>>>>> 688 - vtkIONetCDFPython-NetCDFCF2DBounds (Failed)
>>>>>>> 779 - vtkPVServerManagerDefaultPython-MultiView (Failed)
>>>>>>> 786 - vtkPVServerManagerDefaultPython-SymmetricMultiView
>>>>>>> (Failed)
>>>>>>> 1026 -
>>>>>>> vtkRenderingVolumeCxx-TestGPUVolumeRayCastMapperWindowLevel
>>>>>>> (Failed)
>>>>>>> 1103 - pv.FileSeries (Failed)
>>>>>>> 1104 - pv.HistogramSelection (Failed)
>>>>>>> 1119 - pv.FindDataDialog (Failed)
>>>>>>> 1136 - pv.AnimatePipelineTime (Failed)
>>>>>>> 1140 - pv.CameraLink (Failed)
>>>>>>> 1142 - pv.CheckableHeader (Failed)
>>>>>>> 1165 - pv.FFTOverTime (Failed)
>>>>>>> 1178 - pv.NormalGlyphs (Failed)
>>>>>>> 1186 - pv.PlotOverTimeAutoApply (Failed)
>>>>>>> 1211 - pv.TemporalInterpolator (Failed)
>>>>>>> 1218 - pv.UndoRedo2 (Failed)
>>>>>>> 1230 - pv.SelectionLabels (Failed)
>>>>>>> 1234 - pv.TraceSupplementalProxiesFully (Failed)
>>>>>>> 1252 - pvcs.CameraLink (Failed)
>>>>>>> 1254 - pvcs.CheckableHeader (Failed)
>>>>>>> 1275 - pvcs.FFTOverTime (Failed)
>>>>>>> 1279 - pvcs.ImageVolumeRendering (Failed)
>>>>>>> 1293 - pvcs.PlotOverTimeAutoApply (Failed)
>>>>>>> 1301 - pvcs.PropertyLink (Failed)
>>>>>>> 1317 - pvcs.TensorGlyph (Failed)
>>>>>>> 1318 - pvcs.TemporalInterpolator (Failed)
>>>>>>> 1325 - pvcs.UndoRedo2 (Failed)
>>>>>>> 1340 - pvcs.TraceSupplementalProxiesFully (Failed)
>>>>>>> 1346 - pvcs.HistogramSelection (Failed)
>>>>>>> 1351 - pvcs.NonlinearSubdivisionDisplay (Failed)
>>>>>>> 1360 - pvcs.FindDataDialog (Failed)
>>>>>>> 1376 - pvcrs.CameraLink (Failed)
>>>>>>> 1378 - pvcrs.CheckableHeader (Failed)
>>>>>>> 1384 - pvcrs.ComparativeVisPanel (Failed)
>>>>>>> 1415 - pvcrs.PropertyLink (Failed)
>>>>>>> 1418 - pvcrs.RepresentationSelector (Failed)
>>>>>>> 1420 - pvcrs.SaveCSV (Failed)
>>>>>>> 1422 - pvcrs.SimpleInteraction (Failed)
>>>>>>> 1424 - pvcrs.SliceAlongPolyline (Failed)
>>>>>>> 1426 - pvcrs.SpreadSheet2 (Failed)
>>>>>>> 1430 - pvcrs.TabbedViews (Failed)
>>>>>>> 1432 - pvcrs.TemporalInterpolator (Failed)
>>>>>>> 1439 - pvcrs.UndoRedo2 (Failed)
>>>>>>> 1453 - pvcrs.TraceSupplementalProxiesFully (Failed)
>>>>>>> 1458 - pvcrs.HistogramSelection (Failed)
>>>>>>> 1469 - pvcrs.FindDataDialog (Failed)
>>>>>>> Errors while running CTest
>>>>>>> make: *** [test] Error 8
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> -jeff
>>>>>>>
>>>>>>>
>>>>>>> Utkarsh
>>>>>>>
>>>>>>> On Fri, Jan 9, 2015 at 3:46 PM, Jeff Becker <
>>>>>>> jeffrey.c.becker at nasa.gov>
>>>>>>> wrote:
>>>>>>>
>>>>>>>> Almost there - make output below. Any ideas? Thanks.
>>>>>>>>
>>>>>>>> -jeff
>>>>>>>>
>>>>>>>> Scanning dependencies of target ParaViewExamples
>>>>>>>> [ 80%] Build examples as a separate project
>>>>>>>> Not searching for unused variables given on the command line.
>>>>>>>> Not searching for unused variables given on the command line.
>>>>>>>> Internal cmake changing into directory:
>>>>>>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>>>>>> ======== CMake output ======
>>>>>>>> The C compiler identification is GNU 4.4.7
>>>>>>>> The CXX compiler identification is GNU 4.4.7
>>>>>>>> Check for working C compiler: /usr/bin/cc
>>>>>>>> Configuring
>>>>>>>> Check for working C compiler: /usr/bin/cc -- works
>>>>>>>> Detecting C compiler ABI info
>>>>>>>> Configuring
>>>>>>>> Detecting C compiler ABI info - done
>>>>>>>> Check for working CXX compiler: /usr/bin/c++
>>>>>>>> Configuring
>>>>>>>> Check for working CXX compiler: /usr/bin/c++ -- works
>>>>>>>> Detecting CXX compiler ABI info
>>>>>>>> Configuring
>>>>>>>> Detecting CXX compiler ABI info - done
>>>>>>>> Looking for Q_WS_X11
>>>>>>>> Configuring
>>>>>>>> Looking for Q_WS_X11 - found
>>>>>>>> Looking for Q_WS_WIN
>>>>>>>> Configuring
>>>>>>>> Looking for Q_WS_WIN - not found
>>>>>>>> Looking for Q_WS_QWS
>>>>>>>> Configuring
>>>>>>>> Looking for Q_WS_QWS - not found
>>>>>>>> Looking for Q_WS_MAC
>>>>>>>> Configuring
>>>>>>>> Looking for Q_WS_MAC - not found
>>>>>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>>>>>> "4.8.6")
>>>>>>>> Configuring
>>>>>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>>>>>> "4.8.6")
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring
>>>>>>>> Configuring done
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating
>>>>>>>> Generating done
>>>>>>>> Build files have been written to:
>>>>>>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>>>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>>>>>> "4.8.6")
>>>>>>>> Configuring
>>>>>>>> Found Qt4: /usr/local/Trolltech/Qt-4.8.6/bin/qmake (found version
>>>>>>>> "4.8.6")
>>>>>>>> Configuring
>>>>>>>> Configuring
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>>>>>>>> Configuring done
>>>>>>>> Generating
>>>>>>>> Generating
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>>>>>>>> Generating
>>>>>>>> Generating done
>>>>>>>> Build files have been written to:
>>>>>>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>>>>>> ======== End CMake output ======
>>>>>>>> Change Dir: /u/wk/jcbecker/ParaView-build/Examples/All
>>>>>>>>
>>>>>>>> Run Build Command:/usr/bin/gmake
>>>>>>>> gmake[3]: Entering directory
>>>>>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>>>>> gmake[4]: Entering directory
>>>>>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>>>>> gmake[5]: Entering directory
>>>>>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>>>>> [ 1%] Generating Documentation HTMLs from xmls
>>>>>>>> Processing wiki sources
>>>>>>>> Processing wiki filters
>>>>>>>> Processing wiki writers
>>>>>>>> Processing wiki readers
>>>>>>>> [ 1%] Compiling Qt help project SMMyElevation.qhp
>>>>>>>> Building up file structure...
>>>>>>>> Insert custom filters...
>>>>>>>> Insert help data for filter section (1 of 1)...
>>>>>>>> Insert files...
>>>>>>>> Warning: The file
>>>>>>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.css
>>>>>>>> does
>>>>>>>> not
>>>>>>>> exist! Skipping it.
>>>>>>>> Warning: The file
>>>>>>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.png
>>>>>>>> does
>>>>>>>> not
>>>>>>>> exist! Skipping it.
>>>>>>>> Warning: The file
>>>>>>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.jpg
>>>>>>>> does
>>>>>>>> not
>>>>>>>> exist! Skipping it.
>>>>>>>> Insert contents...
>>>>>>>> Insert indices...
>>>>>>>> Documentation successfully generated.
>>>>>>>> [ 2%] Generating SMMyElevation_doc.h
>>>>>>>> -- Generate module: SMMyElevation
>>>>>>>> gmake[5]: *** No rule to make target
>>>>>>>> `/u/wk/jcbecker/ParaView-build/bin/vtkWrapClientServer-pv4.3',
>>>>>>>> needed by
>>>>>>>> `Plugins/Filter/vtkMyElevationFilterClientServer.cxx'. Stop.
>>>>>>>> gmake[5]: Leaving directory
>>>>>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>>>>> gmake[4]: *** [Plugins/Filter/CMakeFiles/SMMyElevation.dir/all]
>>>>>>>> Error 2
>>>>>>>> gmake[4]: Leaving directory
>>>>>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>>>>> gmake[3]: *** [all] Error 2
>>>>>>>> gmake[3]: Leaving directory
>>>>>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>>>>>> make[2]: *** [ParaViewExamples.done] Error 1
>>>>>>>> make[1]: *** [CMakeFiles/ParaViewExamples.dir/all] Error 2
>>>>>>>> make: *** [all] Error 2
>>>>>>>>
>>>>>>>> _______________________________________________
>>>>>>>> Powered by www.kitware.com
>>>>>>>>
>>>>>>>> Visit other Kitware open-source projects at
>>>>>>>> http://www.kitware.com/opensource/opensource.html
>>>>>>>>
>>>>>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>>>>>> http://paraview.org/Wiki/ParaView
>>>>>>>>
>>>>>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>>>>>
>>>>>>>> Follow this link to subscribe/unsubscribe:
>>>>>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> _______________________________________________
>>>>>>> Powered by www.kitware.com
>>>>>>>
>>>>>>> Visit other Kitware open-source projects at
>>>>>>> http://www.kitware.com/opensource/opensource.html
>>>>>>>
>>>>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>>>>> http://paraview.org/Wiki/ParaView
>>>>>>>
>>>>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>>>>
>>>>>>> Follow this link to subscribe/unsubscribe:
>>>>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>>>>
>>>>>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>>
>>
>>
>
>
>
-------------- next part --------------
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From jeffrey.c.becker at nasa.gov Tue Jan 13 13:20:45 2015
From: jeffrey.c.becker at nasa.gov (Jeff Becker)
Date: Tue, 13 Jan 2015 10:20:45 -0800
Subject: [Paraview] problem building ParaView Examples
In-Reply-To: <CABObKxdKw+ZPu9yt+7hdR6siQQzHVXzz6dbKLgKe=dd66bx9Cg@mail.gmail.com>
References: <54B03E09.2060507@nasa.gov> <CADHSJjBmOMcLn9SbRTqSZNs83GhmnGGmg-L6zgk-=6BvUfHj-Q@mail.gmail.com> <54B416B4.8020208@nasa.gov> <54B42260.4040501@nasa.gov> <CADHSJjC1g_ybTTYf0euHYP+DbsWcQNVFUPnwAFAL4sVavg+a1g@mail.gmail.com> <54B43C93.2040001@nasa.gov> <CADHSJjA7E2iDA2x7a9+q52EHG4=MQy4-bfG_92dSBvdTTT=igw@mail.gmail.com> <54B440C9.1050708@nasa.gov> <CABObKxc4xehT8+nq5OjbRqG+WmtUqWrwkXmfnYZmVpW2Q4L+pg@mail.gmail.com> <54B44FD9.1090906@nasa.gov> <CABObKxcNhpxksiBFHSwCbtSWBfVQoM46dSOGeGOxjXh4_V+NQg@mail.gmail.com> <54B45740.9010102@nasa.gov> <54B462B5.4060806@nasa.gov>
<CABObKxdKw+ZPu9yt+7hdR6siQQzHVXzz6dbKLgKe=dd66bx9Cg@mail.gmail.com>
Message-ID: <54B561FD.90603@nasa.gov>
Salut Sebastien!
On 01/13/2015 07:45 AM, Sebastien Jourdain wrote:
> Hi Jeff,
>
> looking at your test here:
> https://open.cdash.org/viewTest.php?onlyfailed&buildid=3650142
>
> It seems much better. Some of the tests still fail as another window
> went on top (terminal or web browser).
> And some other failures seems to be related to a zoom factor which was
> different.
>
> Base on what I've seen, your ParaView seems OK.
> Although, I'm wondering if you have the proper set of OpenGL drivers.
>
> That test show for example some differences in term of quality.
> => https://open.cdash.org/testDetails.php?test=306359279&build=3650142
>
> But as far as I can tell, you seems to be all set.
Awesome. Thanks for looking at my test results.
-jeff
>
> Seb
>
> On Mon, Jan 12, 2015 at 5:11 PM, Jeff Becker
> <jeffrey.c.becker at nasa.gov <mailto:jeffrey.c.becker at nasa.gov>> wrote:
>
> Resubmitted "ctest -D Experimental"
>
>
> On 01/12/2015 03:22 PM, Jeff Becker wrote:
>> On 01/12/2015 03:18 PM, Sebastien Jourdain wrote:
>>> Hum,
>>>
>>> That should not really matter root or no-root. But since lot of
>>> test perform some rendering operations and that we capture that
>>> section of the screen, we often (on wrongly setup dashboard) see
>>> screensaver capture instead of the user desktop where the
>>> expected rendering is actually happening. (Hence my previous
>>> comment) Such error provide false positive error.
>>>
>>> And looking at several tests here:
>>> https://open.cdash.org/viewTest.php?onlyfailed&buildid=3650082
>>> I've notice the same captured image.
>>>
>>> When you run "ctest -D Experimental", do you see flashing
>>> windows poping up with that image?
>>> Or do they seems to be somewhat valid?
>>> If you try again, try to see if you can disable the screensaver
>>> altogether.
>>
>> OK - Now I think I know what happened. I started the test and
>> went to lunch. Hence my screen locked, and that may have
>> interfered. I'll run it again and watch it. Thanks.
>>
>> -jeff
>>
>>>
>>> Seb
>>>
>>>
>>> On Mon, Jan 12, 2015 at 3:51 PM, Jeff Becker
>>> <jeffrey.c.becker at nasa.gov <mailto:jeffrey.c.becker at nasa.gov>>
>>> wrote:
>>>
>>> On 01/12/2015 02:38 PM, Sebastien Jourdain wrote:
>>>> Do you know if that picture come from your screensaver or
>>>> anything else?
>>>> It seems to be the picture that get captured regardless of
>>>> the test that ran and failed.
>>>>
>>> I don't recognize it.
>>>
>>> I was thinking that it might be a permission issue. I could
>>> try running the tests as root.... Would that help? Thanks.
>>>
>>> -jeff
>>>
>>>
>>>>
>>>>
>>>> On Mon, Jan 12, 2015 at 2:46 PM, Jeff Becker
>>>> <jeffrey.c.becker at nasa.gov
>>>> <mailto:jeffrey.c.becker at nasa.gov>> wrote:
>>>>
>>>> On 01/12/2015 01:38 PM, Utkarsh Ayachit wrote:
>>>>
>>>> That's more from before! :).
>>>>
>>>>
>>>> I assume you meant more "than" before?
>>>>
>>>> Anything funky about the X configuration?
>>>>
>>>>
>>>> What should I look for?
>>>>
>>>> Looks like the framebuffer grabs end up capturing
>>>> ghost images.
>>>>
>>>>
>>>> -jeff
>>>>
>>>>
>>>> Utkarsh
>>>>
>>>> On Mon, Jan 12, 2015 at 1:28 PM, Jeff Becker
>>>> <jeffrey.c.becker at nasa.gov
>>>> <mailto:jeffrey.c.becker at nasa.gov>> wrote:
>>>>
>>>> On 01/12/2015 11:39 AM, Utkarsh Ayachit wrote:
>>>>
>>>> Mind doing a "ctest -D Experimental"?
>>>> That'll submit the test results
>>>> to the ParaView dashboard [1] and will
>>>> provide use more information as
>>>> to why those tests failed.
>>>>
>>>>
>>>> Done. 996 tests failed (see website below). Thanks.
>>>>
>>>> -jeff
>>>>
>>>> [1]
>>>> https://open.cdash.org/index.php?project=ParaView
>>>>
>>>> On Mon, Jan 12, 2015 at 11:37 AM, Jeff
>>>> Becker <jeffrey.c.becker at nasa.gov
>>>> <mailto:jeffrey.c.becker at nasa.gov>>
>>>> wrote:
>>>>
>>>> On 01/12/2015 10:47 AM, Jeff Becker wrote:
>>>>
>>>> On 01/10/2015 04:39 PM, Utkarsh Ayachit
>>>> wrote:
>>>>
>>>> Not sure what's the issue. I tested out
>>>> in my build and seems to work as
>>>> expected. Mind attaching your
>>>> CMakeCache.txt file? Did you by any chance
>>>> turn on PARAVIEW_USE_UNIFIED_BINDINGS
>>>> cmake flag?
>>>>
>>>>
>>>> Yes. I turned that off, and now it
>>>> builds fine. Thanks.
>>>>
>>>>
>>>> I tried 'make test' and got:
>>>>
>>>> 97% tests passed, 47 tests failed out
>>>> of 1499
>>>>
>>>> Failed tests listed below. Do I need to
>>>> worry about these, and if so, how
>>>> to
>>>> fix?
>>>>
>>>> Thanks.
>>>>
>>>> -jeff
>>>>
>>>> The following tests FAILED:
>>>> 1 - pv.TestDevelopmentInstall
>>>> (Failed)
>>>> 73 -
>>>> vtkPVVTKExtensionsDefault-HeaderTest
>>>> (Failed)
>>>> 688 -
>>>> vtkIONetCDFPython-NetCDFCF2DBounds (Failed)
>>>> 779 -
>>>> vtkPVServerManagerDefaultPython-MultiView
>>>> (Failed)
>>>> 786 -
>>>> vtkPVServerManagerDefaultPython-SymmetricMultiView
>>>> (Failed)
>>>> 1026 -
>>>> vtkRenderingVolumeCxx-TestGPUVolumeRayCastMapperWindowLevel
>>>> (Failed)
>>>> 1103 - pv.FileSeries (Failed)
>>>> 1104 - pv.HistogramSelection (Failed)
>>>> 1119 - pv.FindDataDialog (Failed)
>>>> 1136 - pv.AnimatePipelineTime
>>>> (Failed)
>>>> 1140 - pv.CameraLink (Failed)
>>>> 1142 - pv.CheckableHeader (Failed)
>>>> 1165 - pv.FFTOverTime (Failed)
>>>> 1178 - pv.NormalGlyphs (Failed)
>>>> 1186 - pv.PlotOverTimeAutoApply
>>>> (Failed)
>>>> 1211 - pv.TemporalInterpolator
>>>> (Failed)
>>>> 1218 - pv.UndoRedo2 (Failed)
>>>> 1230 - pv.SelectionLabels (Failed)
>>>> 1234 -
>>>> pv.TraceSupplementalProxiesFully (Failed)
>>>> 1252 - pvcs.CameraLink (Failed)
>>>> 1254 - pvcs.CheckableHeader (Failed)
>>>> 1275 - pvcs.FFTOverTime (Failed)
>>>> 1279 - pvcs.ImageVolumeRendering
>>>> (Failed)
>>>> 1293 - pvcs.PlotOverTimeAutoApply
>>>> (Failed)
>>>> 1301 - pvcs.PropertyLink (Failed)
>>>> 1317 - pvcs.TensorGlyph (Failed)
>>>> 1318 - pvcs.TemporalInterpolator
>>>> (Failed)
>>>> 1325 - pvcs.UndoRedo2 (Failed)
>>>> 1340 -
>>>> pvcs.TraceSupplementalProxiesFully (Failed)
>>>> 1346 - pvcs.HistogramSelection
>>>> (Failed)
>>>> 1351 -
>>>> pvcs.NonlinearSubdivisionDisplay (Failed)
>>>> 1360 - pvcs.FindDataDialog (Failed)
>>>> 1376 - pvcrs.CameraLink (Failed)
>>>> 1378 - pvcrs.CheckableHeader (Failed)
>>>> 1384 - pvcrs.ComparativeVisPanel
>>>> (Failed)
>>>> 1415 - pvcrs.PropertyLink (Failed)
>>>> 1418 -
>>>> pvcrs.RepresentationSelector (Failed)
>>>> 1420 - pvcrs.SaveCSV (Failed)
>>>> 1422 - pvcrs.SimpleInteraction
>>>> (Failed)
>>>> 1424 - pvcrs.SliceAlongPolyline
>>>> (Failed)
>>>> 1426 - pvcrs.SpreadSheet2 (Failed)
>>>> 1430 - pvcrs.TabbedViews (Failed)
>>>> 1432 - pvcrs.TemporalInterpolator
>>>> (Failed)
>>>> 1439 - pvcrs.UndoRedo2 (Failed)
>>>> 1453 -
>>>> pvcrs.TraceSupplementalProxiesFully
>>>> (Failed)
>>>> 1458 - pvcrs.HistogramSelection
>>>> (Failed)
>>>> 1469 - pvcrs.FindDataDialog (Failed)
>>>> Errors while running CTest
>>>> make: *** [test] Error 8
>>>>
>>>>
>>>>
>>>>
>>>> -jeff
>>>>
>>>>
>>>> Utkarsh
>>>>
>>>> On Fri, Jan 9, 2015 at 3:46 PM, Jeff
>>>> Becker <jeffrey.c.becker at nasa.gov
>>>> <mailto:jeffrey.c.becker at nasa.gov>>
>>>> wrote:
>>>>
>>>> Almost there - make output below.
>>>> Any ideas? Thanks.
>>>>
>>>> -jeff
>>>>
>>>> Scanning dependencies of target
>>>> ParaViewExamples
>>>> [ 80%] Build examples as a separate
>>>> project
>>>> Not searching for unused variables
>>>> given on the command line.
>>>> Not searching for unused variables
>>>> given on the command line.
>>>> Internal cmake changing into directory:
>>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>> ======== CMake output ======
>>>> The C compiler identification is
>>>> GNU 4.4.7
>>>> The CXX compiler identification is
>>>> GNU 4.4.7
>>>> Check for working C compiler:
>>>> /usr/bin/cc
>>>> Configuring
>>>> Check for working C compiler:
>>>> /usr/bin/cc -- works
>>>> Detecting C compiler ABI info
>>>> Configuring
>>>> Detecting C compiler ABI info - done
>>>> Check for working CXX compiler:
>>>> /usr/bin/c++
>>>> Configuring
>>>> Check for working CXX compiler:
>>>> /usr/bin/c++ -- works
>>>> Detecting CXX compiler ABI info
>>>> Configuring
>>>> Detecting CXX compiler ABI info - done
>>>> Looking for Q_WS_X11
>>>> Configuring
>>>> Looking for Q_WS_X11 - found
>>>> Looking for Q_WS_WIN
>>>> Configuring
>>>> Looking for Q_WS_WIN - not found
>>>> Looking for Q_WS_QWS
>>>> Configuring
>>>> Looking for Q_WS_QWS - not found
>>>> Looking for Q_WS_MAC
>>>> Configuring
>>>> Looking for Q_WS_MAC - not found
>>>> Found Qt4:
>>>> /usr/local/Trolltech/Qt-4.8.6/bin/qmake
>>>> (found version
>>>> "4.8.6")
>>>> Configuring
>>>> Found Qt4:
>>>> /usr/local/Trolltech/Qt-4.8.6/bin/qmake
>>>> (found version
>>>> "4.8.6")
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring done
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating done
>>>> Build files have been written to:
>>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>> Found Qt4:
>>>> /usr/local/Trolltech/Qt-4.8.6/bin/qmake
>>>> (found version
>>>> "4.8.6")
>>>> Configuring
>>>> Found Qt4:
>>>> /usr/local/Trolltech/Qt-4.8.6/bin/qmake
>>>> (found version
>>>> "4.8.6")
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring
>>>> Configuring done
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating
>>>> Generating done
>>>> Build files have been written to:
>>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>> ======== End CMake output ======
>>>> Change Dir:
>>>> /u/wk/jcbecker/ParaView-build/Examples/All
>>>>
>>>> Run Build Command:/usr/bin/gmake
>>>> gmake[3]: Entering directory
>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>> gmake[4]: Entering directory
>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>> gmake[5]: Entering directory
>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>> [ 1%] Generating Documentation
>>>> HTMLs from xmls
>>>> Processing wiki sources
>>>> Processing wiki filters
>>>> Processing wiki writers
>>>> Processing wiki readers
>>>> [ 1%] Compiling Qt help project
>>>> SMMyElevation.qhp
>>>> Building up file structure...
>>>> Insert custom filters...
>>>> Insert help data for filter section
>>>> (1 of 1)...
>>>> Insert files...
>>>> Warning: The file
>>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.css
>>>> does
>>>> not
>>>> exist! Skipping it.
>>>> Warning: The file
>>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.png
>>>> does
>>>> not
>>>> exist! Skipping it.
>>>> Warning: The file
>>>> /u/wk/jcbecker/ParaView-build/Examples/All/Plugins/Filter/doc/*.jpg
>>>> does
>>>> not
>>>> exist! Skipping it.
>>>> Insert contents...
>>>> Insert indices...
>>>> Documentation successfully generated.
>>>> [ 2%] Generating SMMyElevation_doc.h
>>>> -- Generate module: SMMyElevation
>>>> gmake[5]: *** No rule to make target
>>>> `/u/wk/jcbecker/ParaView-build/bin/vtkWrapClientServer-pv4.3',
>>>> needed by
>>>> `Plugins/Filter/vtkMyElevationFilterClientServer.cxx'.
>>>> Stop.
>>>> gmake[5]: Leaving directory
>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>> gmake[4]: ***
>>>> [Plugins/Filter/CMakeFiles/SMMyElevation.dir/all]
>>>> Error 2
>>>> gmake[4]: Leaving directory
>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>> gmake[3]: *** [all] Error 2
>>>> gmake[3]: Leaving directory
>>>> `/u/wk/jcbecker/ParaView-build/Examples/All'
>>>> make[2]: ***
>>>> [ParaViewExamples.done] Error 1
>>>> make[1]: ***
>>>> [CMakeFiles/ParaViewExamples.dir/all]
>>>> Error 2
>>>> make: *** [all] Error 2
>>>>
>>>> _______________________________________________
>>>> Powered by www.kitware.com
>>>> <http://www.kitware.com>
>>>>
>>>> Visit other Kitware open-source
>>>> projects at
>>>> http://www.kitware.com/opensource/opensource.html
>>>>
>>>> Please keep messages on-topic and
>>>> check the ParaView Wiki at:
>>>> http://paraview.org/Wiki/ParaView
>>>>
>>>> Search the list archives at:
>>>> http://markmail.org/search/?q=ParaView
>>>>
>>>> Follow this link to
>>>> subscribe/unsubscribe:
>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>
>>>>
>>>>
>>>>
>>>>
>>>> _______________________________________________
>>>> Powered by www.kitware.com
>>>> <http://www.kitware.com>
>>>>
>>>> Visit other Kitware open-source projects at
>>>> http://www.kitware.com/opensource/opensource.html
>>>>
>>>> Please keep messages on-topic and check
>>>> the ParaView Wiki at:
>>>> http://paraview.org/Wiki/ParaView
>>>>
>>>> Search the list archives at:
>>>> http://markmail.org/search/?q=ParaView
>>>>
>>>> Follow this link to subscribe/unsubscribe:
>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>
>>>>
>>>> _______________________________________________
>>>> Powered by www.kitware.com <http://www.kitware.com>
>>>>
>>>> Visit other Kitware open-source projects at
>>>> http://www.kitware.com/opensource/opensource.html
>>>>
>>>> Please keep messages on-topic and check the ParaView
>>>> Wiki at: http://paraview.org/Wiki/ParaView
>>>>
>>>> Search the list archives at:
>>>> http://markmail.org/search/?q=ParaView
>>>>
>>>> Follow this link to subscribe/unsubscribe:
>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>
>>>>
>>>
>>>
>>
>
>
-------------- next part --------------
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From ben.boeckel at kitware.com Tue Jan 13 13:53:57 2015
From: ben.boeckel at kitware.com (Ben Boeckel)
Date: Tue, 13 Jan 2015 13:53:57 -0500
Subject: [Paraview] problem building ParaView Examples
In-Reply-To: <54B416B4.8020208@nasa.gov>
References: <54B03E09.2060507@nasa.gov>
<CADHSJjBmOMcLn9SbRTqSZNs83GhmnGGmg-L6zgk-=6BvUfHj-Q@mail.gmail.com>
<54B416B4.8020208@nasa.gov>
Message-ID: <20150113185357.GA19672@megas.kitwarein.com>
On Mon, Jan 12, 2015 at 10:47:16 -0800, Jeff Becker wrote:
> Yes. I turned that off, and now it builds fine. Thanks.
I'm tracking this part of it down; do you still have the CMakeCache.txt
related to this failure? If the current build is the same one as here
with just PARAVIEW_USE_UNIFIED_BINDINGS flipped, that will work.
Thanks,
--Ben
From guillegiraldo at gmail.com Tue Jan 13 15:03:35 2015
From: guillegiraldo at gmail.com (Guillermo Giraldo)
Date: Tue, 13 Jan 2015 15:03:35 -0500
Subject: [Paraview] Fwd: This VTK crashes Paraview
In-Reply-To: <CADqEb0rv4U91XunO8w4kvaOMYwWtaWFVO1cT8S4GDpGrNxLvqg@mail.gmail.com>
References: <CADqEb0rv4U91XunO8w4kvaOMYwWtaWFVO1cT8S4GDpGrNxLvqg@mail.gmail.com>
Message-ID: <CADqEb0rabgNbKgfWtecdupKcg47-RpOXvwVq5nuGY6nq5sOhPg@mail.gmail.com>
Hi everybody,
This file (attached) is generated by a Finite Element code, and when trying
to open it from Paraview (v4.2 Win64), it crashes (just after clicking
'Apply'). I checked the file against the specification, and it seems to me
that it is ok. Also, as sometimes a file generated by the code can be
opened with Paraview not crashing, I have the vague impression that the
problem could be related to a large number of cells. To my impression, this
is not a big number of cells, but it happens that smaller files are opened
without problem. I also attach a file generated by the same code that I am
able to open.
I wonder if some expert could check the files and catch an error, or point
me in the right direction to explore for a solution.
Thanks in advance.
--
Cordialmente,
Guillermo Eduardo Giraldo Fernandez
Ing. Mecatronico
Cel. (+57) 301 628 6730
Cartagena, Colombia, SA
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From utkarsh.ayachit at kitware.com Tue Jan 13 20:00:40 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Tue, 13 Jan 2015 17:00:40 -0800
Subject: [Paraview] Fwd: This VTK crashes Paraview
In-Reply-To: <CADqEb0rabgNbKgfWtecdupKcg47-RpOXvwVq5nuGY6nq5sOhPg@mail.gmail.com>
References: <CADqEb0rv4U91XunO8w4kvaOMYwWtaWFVO1cT8S4GDpGrNxLvqg@mail.gmail.com>
<CADqEb0rabgNbKgfWtecdupKcg47-RpOXvwVq5nuGY6nq5sOhPg@mail.gmail.com>
Message-ID: <CADHSJjAo349HM4jcgvMr7aYQ_FVmO+0tFXuKCS31Q04o2udo3Q@mail.gmail.com>
The number of items in CELLS is incorrect. It should be 1684, not
3789. Fixed version attached.
On Tue, Jan 13, 2015 at 12:03 PM, Guillermo Giraldo
<guillegiraldo at gmail.com> wrote:
> Hi everybody,
>
> This file (attached) is generated by a Finite Element code, and when trying
> to open it from Paraview (v4.2 Win64), it crashes (just after clicking
> 'Apply'). I checked the file against the specification, and it seems to me
> that it is ok. Also, as sometimes a file generated by the code can be opened
> with Paraview not crashing, I have the vague impression that the problem
> could be related to a large number of cells. To my impression, this is not a
> big number of cells, but it happens that smaller files are opened without
> problem. I also attach a file generated by the same code that I am able to
> open.
>
> I wonder if some expert could check the files and catch an error, or point
> me in the right direction to explore for a solution.
>
> Thanks in advance.
>
> --
> Cordialmente,
>
> Guillermo Eduardo Giraldo Fernandez
> Ing. Mecatronico
> Cel. (+57) 301 628 6730
> Cartagena, Colombia, SA
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From utkarsh.ayachit at kitware.com Wed Jan 14 08:28:44 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Wed, 14 Jan 2015 05:28:44 -0800
Subject: [Paraview] [EXTERNAL] Re: Volume and the Find Data or Calculator
In-Reply-To: <a5bc299eb95f442e90536f6932dce64d@ES05AMSNLNT.srn.sandia.gov>
References: <9d01f292c24e4754b69e312499249019@ES05AMSNLNT.srn.sandia.gov>
<CADHSJjBx7rrpsGA6sCRuWwT5QaOgG=+CiJo1659is47thqyySg@mail.gmail.com>
<a5bc299eb95f442e90536f6932dce64d@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <CADHSJjDA0OUL_GaDq5XJwfRJiV4zx07cjd3ZXVjUzzPdKLvFKA@mail.gmail.com>
The native GUI calculator doesn't support such features. We created
the Python calculator to a support such functions with ease. We should
investigate making function discovery easy for the Python calculator
for sure.
Utkarsh
On Mon, Jan 12, 2015 at 7:34 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> Sweet! Thanks, I have been asked for that for ages.
>
> So, why isn't that natively in the GUI calculator? Is the calculator where it belongs? Mind if I add a feature request, targeted for 4.4?
>
> Alan
>
> -----Original Message-----
> From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
> Sent: Monday, January 12, 2015 7:54 PM
> To: Scott, W Alan
> Cc: paraview at paraview.org
> Subject: [EXTERNAL] Re: [Paraview] Volume and the Find Data or Calculator
>
> Try "volume(inputs[0])" as the expression for Python calculator to compute a "Cell Data" result. That should give you volume for each cell in the dataset.
>
> On Mon, Jan 12, 2015 at 6:48 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>> Is it possible to find the volume of each cell, and create a new
>> variable with this information?
>>
>> Thanks,
>>
>> Alan
>>
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
From wascott at sandia.gov Wed Jan 14 10:58:37 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Wed, 14 Jan 2015 15:58:37 +0000
Subject: [Paraview] [EXTERNAL] Re: Volume and the Find Data or Calculator
In-Reply-To: <CADHSJjDA0OUL_GaDq5XJwfRJiV4zx07cjd3ZXVjUzzPdKLvFKA@mail.gmail.com>
References: <9d01f292c24e4754b69e312499249019@ES05AMSNLNT.srn.sandia.gov>
<CADHSJjBx7rrpsGA6sCRuWwT5QaOgG=+CiJo1659is47thqyySg@mail.gmail.com>
<a5bc299eb95f442e90536f6932dce64d@ES05AMSNLNT.srn.sandia.gov>
<CADHSJjDA0OUL_GaDq5XJwfRJiV4zx07cjd3ZXVjUzzPdKLvFKA@mail.gmail.com>
Message-ID: <0b48d7d957b64586b986ca4154294b99@ES05AMSNLNT.srn.sandia.gov>
Would it be possible to add volume calculation/retrieval to the GUI calculator? I hear a need for this functionality fairly frequently, including from non Python folks.
Regarding making function discovery and use easy for the Python Calculator, see this as an equally useful functionality to the trace recorder. I.e., somewhat game changing.
Alan
-----Original Message-----
From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
Sent: Wednesday, January 14, 2015 6:29 AM
To: Scott, W Alan
Cc: paraview at paraview.org
Subject: Re: [EXTERNAL] Re: [Paraview] Volume and the Find Data or Calculator
The native GUI calculator doesn't support such features. We created the Python calculator to a support such functions with ease. We should investigate making function discovery easy for the Python calculator for sure.
Utkarsh
On Mon, Jan 12, 2015 at 7:34 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> Sweet! Thanks, I have been asked for that for ages.
>
> So, why isn't that natively in the GUI calculator? Is the calculator where it belongs? Mind if I add a feature request, targeted for 4.4?
>
> Alan
>
> -----Original Message-----
> From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
> Sent: Monday, January 12, 2015 7:54 PM
> To: Scott, W Alan
> Cc: paraview at paraview.org
> Subject: [EXTERNAL] Re: [Paraview] Volume and the Find Data or
> Calculator
>
> Try "volume(inputs[0])" as the expression for Python calculator to compute a "Cell Data" result. That should give you volume for each cell in the dataset.
>
> On Mon, Jan 12, 2015 at 6:48 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>> Is it possible to find the volume of each cell, and create a new
>> variable with this information?
>>
>> Thanks,
>>
>> Alan
>>
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
From mary.draney at gmail.com Wed Jan 14 15:16:19 2015
From: mary.draney at gmail.com (Mary Draney Blomme)
Date: Wed, 14 Jan 2015 14:16:19 -0600
Subject: [Paraview] Opacity crashing ParaView and Value Range field for
creating multiple slices is missing
Message-ID: <CAHou1pC4Be7-EMB-gUYh2O=2WWxuPxRYeF3OvaSQTp6bDY3osQ@mail.gmail.com>
Hi,
I'm new to ParaView and going through the first webinar, using the demo
data set disk_out.ref. I'm using ParaView 4.2.0 on two different Windows
64-bit computers.
I'm having two problems, one on each computer.
1. On the first computer, a desktop, when I go to change opacity of the
main disk_out_ref.ex2 object, ParaView crashes. Is this a problem with my
graphics card?
2. On the second computer, a laptop, the opacity changes just fine,
however, for creating multiple slices, the Value Range field is missing
(under the Properties tab for Slice 1, immediately under the "Triangulate
the slice" option). How do I get it to show up? I have tried quitting and
restarting, and also tried ParaView 4.3.0 and had no success.
Thanks,
- Mary
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From Joshua.Murphy at lasp.colorado.edu Wed Jan 14 15:05:39 2015
From: Joshua.Murphy at lasp.colorado.edu (Joshua Murphy)
Date: Wed, 14 Jan 2015 13:05:39 -0700
Subject: [Paraview] Super build issues on Yellowstone
Message-ID: <100E56F4-B2A6-47BF-874C-A1FD59342D2F@lasp.colorado.edu>
Hi all,
Has anyone successfully built the superbuild of Paraview on Yellowstone (actually, caldera)? I am attempting to compile, and I keep getting a freetype build failure.
Here is the failure:
/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build/libtool --mode=compile gcc -pedantic -ansi -fPIC -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/builds/unix -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/include -c -Wall -fPIC -DFT_CONFIG_OPTION_SYSTEM_ZLIB -DFT_CONFIG_OPTION_USE_BZIP2 -DFT_CONFIG_CONFIG_H="<ftconfig.h>" -DFT2_BUILD_LIBRARY -DFT_CONFIG_MODULES_H="<ftmodule.h>" -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base -o /glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build/ftbase.lo /glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base/ftbase.c
libtool: compile: gcc -pedantic -ansi -fPIC -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/builds/unix -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/include -c -Wall -fPIC -DFT_CONFIG_OPTION_SYSTEM_ZLIB -DFT_CONFIG_OPTION_USE_BZIP2 "-DFT_CONFIG_CONFIG_H=<ftconfig.h>" -DFT2_BUILD_LIBRARY "-DFT_CONFIG_MODULES_H=<ftmodule.h>" -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base /glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base/ftbase.c -fPIC -DPIC -o /glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build/.libs/ftbase.o
/glade/apps/opt/modulefiles/ys/cmpwrappers/gcc[52]: eval[1]: -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base: cannot create [No such file or directory]
make: *** [/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build/ftbase.lo] Error 1
=====
If anyone has had any luck with this, could you please let me know the trick?
Thanks,
Josh
From wascott at sandia.gov Wed Jan 14 21:57:33 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Thu, 15 Jan 2015 02:57:33 +0000
Subject: [Paraview] [EXTERNAL] Opacity crashing ParaView and Value Range
field for creating multiple slices is missing
In-Reply-To: <CAHou1pC4Be7-EMB-gUYh2O=2WWxuPxRYeF3OvaSQTp6bDY3osQ@mail.gmail.com>
References: <CAHou1pC4Be7-EMB-gUYh2O=2WWxuPxRYeF3OvaSQTp6bDY3osQ@mail.gmail.com>
Message-ID: <932230ae154046659095622db35bc01f@ES05AMSNLNT.srn.sandia.gov>
Mary,
Since one computer works and the other doesn?t, sounds like a graphics card issue to me. Try updating your graphics drivers? Also, try PV 4.3.0. I know there was a problem with some volume rendering for older versions of OpenGL. This should be fixed for PV 4.3.0. Note that the next version of ParaView will require a somewhat newer version of OpenGL than PV 4.3.0, so if this is the problem, you are on borrowed time for volume rendering and opacity rendering.
I just tried, and got multiple slices to work just fine. The trick is to click on the blue plus sign, slightly right of the Value Range window. You can then edit the value that appears. Does that work?
Alan
From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Mary Draney Blomme
Sent: Wednesday, January 14, 2015 1:16 PM
To: paraview at paraview.org
Subject: [EXTERNAL] [Paraview] Opacity crashing ParaView and Value Range field for creating multiple slices is missing
Hi,
I'm new to ParaView and going through the first webinar, using the demo data set disk_out.ref. I'm using ParaView 4.2.0 on two different Windows 64-bit computers.
I'm having two problems, one on each computer.
1. On the first computer, a desktop, when I go to change opacity of the main disk_out_ref.ex2 object, ParaView crashes. Is this a problem with my graphics card?
2. On the second computer, a laptop, the opacity changes just fine, however, for creating multiple slices, the Value Range field is missing (under the Properties tab for Slice 1, immediately under the "Triangulate the slice" option). How do I get it to show up? I have tried quitting and restarting, and also tried ParaView 4.3.0 and had no success.
Thanks,
- Mary
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From mary.draney at gmail.com Wed Jan 14 23:30:00 2015
From: mary.draney at gmail.com (Mary Draney Blomme)
Date: Wed, 14 Jan 2015 22:30:00 -0600
Subject: [Paraview] [EXTERNAL] Opacity crashing ParaView and Value Range
field for creating multiple slices is missing
In-Reply-To: <932230ae154046659095622db35bc01f@ES05AMSNLNT.srn.sandia.gov>
References: <CAHou1pC4Be7-EMB-gUYh2O=2WWxuPxRYeF3OvaSQTp6bDY3osQ@mail.gmail.com>
<932230ae154046659095622db35bc01f@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <CAHou1pAb-+r5z+ui_DHrsNOpR3d=fUw2g1CYFKkiORZ65yq3JA@mail.gmail.com>
Alan,
Thanks for your reply. I'm out of the office until Friday, so I'll have to
wait to try upgrading my graphics drivers on the desktop until then. The
laptop problem, however, continues. I'm attaching a screen snapshot of what
I see. Am I missing something?
Thanks again,
- Mary
On Wed, Jan 14, 2015 at 8:57 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> Mary,
>
> Since one computer works and the other doesn?t, sounds like a graphics
> card issue to me. Try updating your graphics drivers? Also, try PV
> 4.3.0. I know there was a problem with some volume rendering for older
> versions of OpenGL. This should be fixed for PV 4.3.0. Note that the next
> version of ParaView will require a somewhat newer version of OpenGL than PV
> 4.3.0, so if this is the problem, you are on borrowed time for volume
> rendering and opacity rendering.
>
>
>
> I just tried, and got multiple slices to work just fine. The trick is to
> click on the blue plus sign, slightly right of the Value Range window. You
> can then edit the value that appears. Does that work?
>
>
>
> Alan
>
>
>
>
>
>
>
>
>
> *From:* ParaView [mailto:paraview-bounces at paraview.org] *On Behalf Of *Mary
> Draney Blomme
> *Sent:* Wednesday, January 14, 2015 1:16 PM
> *To:* paraview at paraview.org
> *Subject:* [EXTERNAL] [Paraview] Opacity crashing ParaView and Value
> Range field for creating multiple slices is missing
>
>
>
> Hi,
>
>
>
> I'm new to ParaView and going through the first webinar, using the demo
> data set disk_out.ref. I'm using ParaView 4.2.0 on two different Windows
> 64-bit computers.
>
>
>
> I'm having two problems, one on each computer.
>
>
>
> 1. On the first computer, a desktop, when I go to change opacity of the
> main disk_out_ref.ex2 object, ParaView crashes. Is this a problem with my
> graphics card?
>
>
>
> 2. On the second computer, a laptop, the opacity changes just fine,
> however, for creating multiple slices, the Value Range field is missing
> (under the Properties tab for Slice 1, immediately under the "Triangulate
> the slice" option). How do I get it to show up? I have tried quitting and
> restarting, and also tried ParaView 4.3.0 and had no success.
>
>
>
> Thanks,
>
>
>
> - Mary
>
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From david.thompson at kitware.com Thu Jan 15 01:45:32 2015
From: david.thompson at kitware.com (David Thompson)
Date: Thu, 15 Jan 2015 01:45:32 -0500
Subject: [Paraview] [EXTERNAL] Opacity crashing ParaView and Value Range
field for creating multiple slices is missing
In-Reply-To: <CAHou1pAb-+r5z+ui_DHrsNOpR3d=fUw2g1CYFKkiORZ65yq3JA@mail.gmail.com>
References: <CAHou1pC4Be7-EMB-gUYh2O=2WWxuPxRYeF3OvaSQTp6bDY3osQ@mail.gmail.com>
<932230ae154046659095622db35bc01f@ES05AMSNLNT.srn.sandia.gov>
<CAHou1pAb-+r5z+ui_DHrsNOpR3d=fUw2g1CYFKkiORZ65yq3JA@mail.gmail.com>
Message-ID: <23D7EBC4-1086-40A1-BDCD-FE725A99E93A@kitware.com>
Hi Mary,
Try clicking the small gear icon in the property panel. That should display the advanced settings like value range.
David
> On Jan 14, 2015, at 23:30, Mary Draney Blomme <mary.draney at gmail.com> wrote:
>
> Alan,
>
> Thanks for your reply. I'm out of the office until Friday, so I'll have to wait to try upgrading my graphics drivers on the desktop until then. The laptop problem, however, continues. I'm attaching a screen snapshot of what I see. Am I missing something?
>
> Thanks again,
>
> - Mary
>
>> On Wed, Jan 14, 2015 at 8:57 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>> Mary,
>>
>> Since one computer works and the other doesn?t, sounds like a graphics card issue to me. Try updating your graphics drivers? Also, try PV 4.3.0. I know there was a problem with some volume rendering for older versions of OpenGL. This should be fixed for PV 4.3.0. Note that the next version of ParaView will require a somewhat newer version of OpenGL than PV 4.3.0, so if this is the problem, you are on borrowed time for volume rendering and opacity rendering.
>>
>>
>>
>> I just tried, and got multiple slices to work just fine. The trick is to click on the blue plus sign, slightly right of the Value Range window. You can then edit the value that appears. Does that work?
>>
>>
>>
>> Alan
>>
>>
>>
>>
>>
>>
>>
>>
>>
>> From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Mary Draney Blomme
>> Sent: Wednesday, January 14, 2015 1:16 PM
>> To: paraview at paraview.org
>> Subject: [EXTERNAL] [Paraview] Opacity crashing ParaView and Value Range field for creating multiple slices is missing
>>
>>
>>
>> Hi,
>>
>>
>>
>> I'm new to ParaView and going through the first webinar, using the demo data set disk_out.ref. I'm using ParaView 4.2.0 on two different Windows 64-bit computers.
>>
>>
>>
>> I'm having two problems, one on each computer.
>>
>>
>>
>> 1. On the first computer, a desktop, when I go to change opacity of the main disk_out_ref.ex2 object, ParaView crashes. Is this a problem with my graphics card?
>>
>>
>>
>> 2. On the second computer, a laptop, the opacity changes just fine, however, for creating multiple slices, the Value Range field is missing (under the Properties tab for Slice 1, immediately under the "Triangulate the slice" option). How do I get it to show up? I have tried quitting and restarting, and also tried ParaView 4.3.0 and had no success.
>>
>>
>>
>> Thanks,
>>
>>
>>
>> - Mary
>>
>
> <NoMultipleSlices.jpg>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
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From Gerald.Lodron at joanneum.at Thu Jan 15 03:51:12 2015
From: Gerald.Lodron at joanneum.at (Lodron, Gerald)
Date: Thu, 15 Jan 2015 08:51:12 +0000
Subject: [Paraview] Changes from PV4.1 to PV4.3 - color
Message-ID: <ff5173d8c9394a428752c49b953331d3@RZJMBX2.jr1.local>
Hello
I successfully updated paraview and my plugins from 4.1 with qt4 to 4.3 with qt5. But now my personal polydata meshes were not colored correctly. In paraview 4.1 I added Point Attribute based field data to my triangles (vtkPolydata object) with a 3 component RGB unsigned char array named color to color the meshes. Now in PV4.3 only the magnitude is displayed. Am I doing something wrong?
Thanks for help and tips
Gerald
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From Gerald.Lodron at joanneum.at Thu Jan 15 04:04:38 2015
From: Gerald.Lodron at joanneum.at (Lodron, Gerald)
Date: Thu, 15 Jan 2015 09:04:38 +0000
Subject: [Paraview] WG: Changes from PV4.1 to PV4.3 - color
In-Reply-To: <ff5173d8c9394a428752c49b953331d3@RZJMBX2.jr1.local>
References: <ff5173d8c9394a428752c49b953331d3@RZJMBX2.jr1.local>
Message-ID: <efd9046f9ea34bc1afcacc81214ac179@RZJMBX2.jr1.local>
Hello
My fault/blame/shame. Forgot disabling MapScalars in Advanced settings..... arg
Thanks/Sorry for disturbing....
Von: Paraview-developers [mailto:paraview-developers-bounces at paraview.org] Im Auftrag von Lodron, Gerald
Gesendet: Donnerstag, 15. J?nner 2015 09:51
An: Paraview Developer (Paraview-developers at paraview.org); Paraview User (paraview at paraview.org)
Betreff: [Paraview-developers] Changes from PV4.1 to PV4.3 - color
Hello
I successfully updated paraview and my plugins from 4.1 with qt4 to 4.3 with qt5. But now my personal polydata meshes were not colored correctly. In paraview 4.1 I added Point Attribute based field data to my triangles (vtkPolydata object) with a 3 component RGB unsigned char array named color to color the meshes. Now in PV4.3 only the magnitude is displayed. Am I doing something wrong?
Thanks for help and tips
Gerald
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From mvanmoer at illinois.edu Thu Jan 15 12:10:53 2015
From: mvanmoer at illinois.edu (Vanmoer, Mark W)
Date: Thu, 15 Jan 2015 17:10:53 +0000
Subject: [Paraview] migrating ParaView 3.14.1 project to 4,
pqPythonShell::releaseControl
In-Reply-To: <CANjZAi_Zduivzfm7bgrO-zAV8sXK6ry7gOLTDUJRgK+C9K9oJQ@mail.gmail.com>
References: <7F781841FF1E044388AFA42B70703A7A8A0AD6F9@CHIMBX6.ad.uillinois.edu>
<CANjZAi_Zduivzfm7bgrO-zAV8sXK6ry7gOLTDUJRgK+C9K9oJQ@mail.gmail.com>
Message-ID: <7F781841FF1E044388AFA42B70703A7A8A0DDD63@CHIMBX6.ad.uillinois.edu>
Hi David, thanks for the explanation, finally getting back to this project.
Mark
From: David E DeMarle [mailto:dave.demarle at kitware.com]
Sent: Friday, December 19, 2014 3:57 PM
To: Vanmoer, Mark W
Cc: paraview at paraview.org
Subject: Re: [Paraview] migrating ParaView 3.14.1 project to 4, pqPythonShell::releaseControl
Hey Mark,
Yes that is superfluous now. We removed the GIL back in the 4.0 transition to be compatible with python libraries that are incompatible with it. Since then you don't need to manage it directly anymore.
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909
On Fri, Dec 19, 2014 at 4:06 PM, Vanmoer, Mark W <mvanmoer at illinois.edu<mailto:mvanmoer at illinois.edu>> wrote:
Hello,
I?ve started migrating a set of plugins written in ParaView 3.14.1 to ParaView 4.0.1 There?s a class method that uses pqPythonShell and tries to call releaseControl(). Sure enough, pqPythonShell in 3.14.1 has a releseControl() method, but it?s no longer there in 4.0.1.
What?s recommended for this, is that method just superfluous now?
Thanks,
Mark
_______________________________________________
Powered by www.kitware.com<http://www.kitware.com>
Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
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From mary.draney at gmail.com Thu Jan 15 12:12:20 2015
From: mary.draney at gmail.com (Mary Draney Blomme)
Date: Thu, 15 Jan 2015 11:12:20 -0600
Subject: [Paraview] [EXTERNAL] Opacity crashing ParaView and Value Range
field for creating multiple slices is missing
In-Reply-To: <23D7EBC4-1086-40A1-BDCD-FE725A99E93A@kitware.com>
References: <CAHou1pC4Be7-EMB-gUYh2O=2WWxuPxRYeF3OvaSQTp6bDY3osQ@mail.gmail.com>
<932230ae154046659095622db35bc01f@ES05AMSNLNT.srn.sandia.gov>
<CAHou1pAb-+r5z+ui_DHrsNOpR3d=fUw2g1CYFKkiORZ65yq3JA@mail.gmail.com>
<23D7EBC4-1086-40A1-BDCD-FE725A99E93A@kitware.com>
Message-ID: <CAHou1pArpza4pfvj5X6M_GbaY5NfZdo04V9=im8-W0VxAV4EtQ@mail.gmail.com>
David,
Thanks, that fixed it!
- Mary
On Jan 15, 2015 12:45 AM, "David Thompson" <david.thompson at kitware.com>
wrote:
> Hi Mary,
>
> Try clicking the small gear icon in the property panel. That should
> display the advanced settings like value range.
>
> David
>
>
>
> On Jan 14, 2015, at 23:30, Mary Draney Blomme <mary.draney at gmail.com>
> wrote:
>
> Alan,
>
> Thanks for your reply. I'm out of the office until Friday, so I'll have to
> wait to try upgrading my graphics drivers on the desktop until then. The
> laptop problem, however, continues. I'm attaching a screen snapshot of what
> I see. Am I missing something?
>
> Thanks again,
>
> - Mary
>
> On Wed, Jan 14, 2015 at 8:57 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>
>> Mary,
>>
>> Since one computer works and the other doesn?t, sounds like a graphics
>> card issue to me. Try updating your graphics drivers? Also, try PV
>> 4.3.0. I know there was a problem with some volume rendering for older
>> versions of OpenGL. This should be fixed for PV 4.3.0. Note that the next
>> version of ParaView will require a somewhat newer version of OpenGL than PV
>> 4.3.0, so if this is the problem, you are on borrowed time for volume
>> rendering and opacity rendering.
>>
>>
>>
>> I just tried, and got multiple slices to work just fine. The trick is to
>> click on the blue plus sign, slightly right of the Value Range window. You
>> can then edit the value that appears. Does that work?
>>
>>
>>
>> Alan
>>
>>
>>
>>
>>
>>
>>
>>
>>
>> *From:* ParaView [mailto:paraview-bounces at paraview.org] *On Behalf Of *Mary
>> Draney Blomme
>> *Sent:* Wednesday, January 14, 2015 1:16 PM
>> *To:* paraview at paraview.org
>> *Subject:* [EXTERNAL] [Paraview] Opacity crashing ParaView and Value
>> Range field for creating multiple slices is missing
>>
>>
>>
>> Hi,
>>
>>
>>
>> I'm new to ParaView and going through the first webinar, using the demo
>> data set disk_out.ref. I'm using ParaView 4.2.0 on two different Windows
>> 64-bit computers.
>>
>>
>>
>> I'm having two problems, one on each computer.
>>
>>
>>
>> 1. On the first computer, a desktop, when I go to change opacity of the
>> main disk_out_ref.ex2 object, ParaView crashes. Is this a problem with my
>> graphics card?
>>
>>
>>
>> 2. On the second computer, a laptop, the opacity changes just fine,
>> however, for creating multiple slices, the Value Range field is missing
>> (under the Properties tab for Slice 1, immediately under the "Triangulate
>> the slice" option). How do I get it to show up? I have tried quitting and
>> restarting, and also tried ParaView 4.3.0 and had no success.
>>
>>
>>
>> Thanks,
>>
>>
>>
>> - Mary
>>
>
> <NoMultipleSlices.jpg>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From sebastien.jourdain at kitware.com Fri Jan 16 12:12:42 2015
From: sebastien.jourdain at kitware.com (Sebastien Jourdain)
Date: Fri, 16 Jan 2015 10:12:42 -0700
Subject: [Paraview] ANN: ParaView GateKeeper Review Summary
Message-ID: <CABObKxcT95ifn4GeFB8VozOm-K9XVtTmdQnTDDcEpsDKey9gPw@mail.gmail.com>
SUMMARY
---------------------------------------------
Topics merged into master (v4.3.1-18-g04df19f):
colormap_editor_display_array_name
fix-headertest-failure
fix-windows-path-escaping
fix_add_active_values
(VTK) pvw-fix-lod-rerender
(VTK) pvweb-add-scalar-opacity-widget
pvweb-allow-single-datadir-with-key
---------------------------------------------
Topics reverted from next:
help-15203
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From mary.draney at gmail.com Fri Jan 16 15:30:41 2015
From: mary.draney at gmail.com (Mary Draney Blomme)
Date: Fri, 16 Jan 2015 14:30:41 -0600
Subject: [Paraview] [EXTERNAL] Opacity crashing ParaView and Value Range
field for creating multiple slices is missing
In-Reply-To: <932230ae154046659095622db35bc01f@ES05AMSNLNT.srn.sandia.gov>
References: <CAHou1pC4Be7-EMB-gUYh2O=2WWxuPxRYeF3OvaSQTp6bDY3osQ@mail.gmail.com>
<932230ae154046659095622db35bc01f@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <CAHou1pCeKJ+iP=i4Y36Yqt-TP5_fBPLeWOo-JF25FZO_BdESkQ@mail.gmail.com>
Alan,
I successfully upgraded my OpenGL version and changing opacity works just
fine now.
Thanks again for your help.
- Mary
On Wed, Jan 14, 2015 at 8:57 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> Mary,
>
> Since one computer works and the other doesn?t, sounds like a graphics
> card issue to me. Try updating your graphics drivers? Also, try PV
> 4.3.0. I know there was a problem with some volume rendering for older
> versions of OpenGL. This should be fixed for PV 4.3.0. Note that the next
> version of ParaView will require a somewhat newer version of OpenGL than PV
> 4.3.0, so if this is the problem, you are on borrowed time for volume
> rendering and opacity rendering.
>
>
>
> I just tried, and got multiple slices to work just fine. The trick is to
> click on the blue plus sign, slightly right of the Value Range window. You
> can then edit the value that appears. Does that work?
>
>
>
> Alan
>
>
>
>
>
>
>
>
>
> *From:* ParaView [mailto:paraview-bounces at paraview.org] *On Behalf Of *Mary
> Draney Blomme
> *Sent:* Wednesday, January 14, 2015 1:16 PM
> *To:* paraview at paraview.org
> *Subject:* [EXTERNAL] [Paraview] Opacity crashing ParaView and Value
> Range field for creating multiple slices is missing
>
>
>
> Hi,
>
>
>
> I'm new to ParaView and going through the first webinar, using the demo
> data set disk_out.ref. I'm using ParaView 4.2.0 on two different Windows
> 64-bit computers.
>
>
>
> I'm having two problems, one on each computer.
>
>
>
> 1. On the first computer, a desktop, when I go to change opacity of the
> main disk_out_ref.ex2 object, ParaView crashes. Is this a problem with my
> graphics card?
>
>
>
> 2. On the second computer, a laptop, the opacity changes just fine,
> however, for creating multiple slices, the Value Range field is missing
> (under the Properties tab for Slice 1, immediately under the "Triangulate
> the slice" option). How do I get it to show up? I have tried quitting and
> restarting, and also tried ParaView 4.3.0 and had no success.
>
>
>
> Thanks,
>
>
>
> - Mary
>
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From wascott at sandia.gov Fri Jan 16 19:27:42 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Sat, 17 Jan 2015 00:27:42 +0000
Subject: [Paraview] [EXTERNAL] Opacity crashing ParaView and Value Range
field for creating multiple slices is missing
In-Reply-To: <CAHou1pCeKJ+iP=i4Y36Yqt-TP5_fBPLeWOo-JF25FZO_BdESkQ@mail.gmail.com>
References: <CAHou1pC4Be7-EMB-gUYh2O=2WWxuPxRYeF3OvaSQTp6bDY3osQ@mail.gmail.com>
<932230ae154046659095622db35bc01f@ES05AMSNLNT.srn.sandia.gov>
<CAHou1pCeKJ+iP=i4Y36Yqt-TP5_fBPLeWOo-JF25FZO_BdESkQ@mail.gmail.com>
Message-ID: <ae68815534824246ba4ad80f4d9991b8@ES05AMSNLNT.srn.sandia.gov>
Excellent. I love bug fixes that are that easy!
Also, welcome to ParaView. Great tool, friendly users.
Alan
From: Mary Draney Blomme [mailto:mary.draney at gmail.com]
Sent: Friday, January 16, 2015 1:31 PM
To: Scott, W Alan
Cc: paraview at paraview.org
Subject: Re: [EXTERNAL] [Paraview] Opacity crashing ParaView and Value Range field for creating multiple slices is missing
Alan,
I successfully upgraded my OpenGL version and changing opacity works just fine now.
Thanks again for your help.
- Mary
On Wed, Jan 14, 2015 at 8:57 PM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov>> wrote:
Mary,
Since one computer works and the other doesn?t, sounds like a graphics card issue to me. Try updating your graphics drivers? Also, try PV 4.3.0. I know there was a problem with some volume rendering for older versions of OpenGL. This should be fixed for PV 4.3.0. Note that the next version of ParaView will require a somewhat newer version of OpenGL than PV 4.3.0, so if this is the problem, you are on borrowed time for volume rendering and opacity rendering.
I just tried, and got multiple slices to work just fine. The trick is to click on the blue plus sign, slightly right of the Value Range window. You can then edit the value that appears. Does that work?
Alan
From: ParaView [mailto:paraview-bounces at paraview.org<mailto:paraview-bounces at paraview.org>] On Behalf Of Mary Draney Blomme
Sent: Wednesday, January 14, 2015 1:16 PM
To: paraview at paraview.org<mailto:paraview at paraview.org>
Subject: [EXTERNAL] [Paraview] Opacity crashing ParaView and Value Range field for creating multiple slices is missing
Hi,
I'm new to ParaView and going through the first webinar, using the demo data set disk_out.ref. I'm using ParaView 4.2.0 on two different Windows 64-bit computers.
I'm having two problems, one on each computer.
1. On the first computer, a desktop, when I go to change opacity of the main disk_out_ref.ex2 object, ParaView crashes. Is this a problem with my graphics card?
2. On the second computer, a laptop, the opacity changes just fine, however, for creating multiple slices, the Value Range field is missing (under the Properties tab for Slice 1, immediately under the "Triangulate the slice" option). How do I get it to show up? I have tried quitting and restarting, and also tried ParaView 4.3.0 and had no success.
Thanks,
- Mary
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From e.a.hereth at gmail.com Fri Jan 16 22:48:22 2015
From: e.a.hereth at gmail.com (Ethan Hereth)
Date: Sat, 17 Jan 2015 03:48:22 +0000
Subject: [Paraview] Relative frequencies in Histogram plots
References: <CACoCd8dask8qNs16Tift=DX+Vh9dVhwXsxxYfXjK_2Lx2LVLmg@mail.gmail.com>
<CADHSJjBrfT7AtSkdVK+=WfbkLhR8N3tyBUv=r0ksLY7wSOujXg@mail.gmail.com>
<CADHSJjACT8NeYOF3YdN-0MjPxghivx_akPbxLn6wwD7B3igpyw@mail.gmail.com>
Message-ID: <CACoCd8cuWF382_yV66NJK6wdstR972SF0NwgkYfV1wWHw2MCZg@mail.gmail.com>
Utkarsh,
Thank you very much. That is exactly what we were looking for. I just knew
that there had to be a way to do it using the "Programmable Filter" but I
didn't know how!
Cheers, and thank you again for your help.
On Mon Jan 12 2015 at 5:07:53 PM Utkarsh Ayachit <
utkarsh.ayachit at kitware.com> wrote:
> Before some yells at me for using bad code for type conversion :),
> here's a better code:
>
> import numpy
> sum = numpy.sum(inputs[0].RowData["bin_values"])
> array = inputs[0].RowData["bin_values"].astype(numpy.float32)
> array = 100.0*array/sum
> output.RowData.append(array, "bin_values")
> output.RowData.append(inputs[0].RowData["bin_extents"], "bin_extents")
>
> On Mon, Jan 12, 2015 at 2:01 PM, Utkarsh Ayachit
> <utkarsh.ayachit at kitware.com> wrote:
> > You could do this using a Python Programmable Filter.
> >
> > Here's a script to use:
> >
> > import numpy
> > sum = numpy.sum(inputs[0].RowData["bin_values"])
> > array = 1.0 * inputs[0].RowData["bin_values"]
> > array = 100.0*array/sum
> > output.RowData.append(array, "bin_values")
> > output.RowData.append(inputs[0].RowData["bin_extents"], "bin_extents")
> >
> > Attached is a state file.
> >
> > Utkarsh
> >
> > On Wed, Jan 7, 2015 at 1:03 PM, Ethan Hereth <e.a.hereth at gmail.com>
> wrote:
> >> Good afternoon and happy new year!
> >>
> >> I have a colleague who would like to be able to plot the relative
> frequency
> >> of the histogram data instead of absolute bin count. I.e. instead of
> having
> >> the left axis say there are 100 things in bin one, he'd like for it to
> say
> >> that 5% of the things are in bin one.
> >>
> >> Is this possible?
> >>
> >> Thank you!
> >>
> >> --
> >> Ethan Alan Hereth
> >>
> >> _______________________________________________
> >> Powered by www.kitware.com
> >>
> >> Visit other Kitware open-source projects at
> >> http://www.kitware.com/opensource/opensource.html
> >>
> >> Please keep messages on-topic and check the ParaView Wiki at:
> >> http://paraview.org/Wiki/ParaView
> >>
> >> Search the list archives at: http://markmail.org/search/?q=ParaView
> >>
> >> Follow this link to subscribe/unsubscribe:
> >> http://public.kitware.com/mailman/listinfo/paraview
> >>
>
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From louie.cardone-noott at linacre.ox.ac.uk Sat Jan 17 11:26:01 2015
From: louie.cardone-noott at linacre.ox.ac.uk (Louie Cardone-Noott)
Date: Sat, 17 Jan 2015 16:26:01 +0000
Subject: [Paraview] VTK parallel unstructured grid and halo elements
Message-ID: <CAOCDKs-QyegsnEEypxCewSSRe82tDBvPwXMOepCj5kDxjmY3fA@mail.gmail.com>
Hi Paraview list,
I use a finite element code that generates VTK output, but I'm having
trouble dealing with halo (ghost) nodes/elements correctly.
We currently partition meshes node-wise, and each process writes all its
owned nodes and one level of halo nodes to a chunk. Once all the chunks are
loaded there is a "double layer" of internal boundaries between processes.
I'd really like to be able to use the Extract Surface filter correctly but
as you would expect it also finds all the internal surfaces. From searching
I've tried:
* Clean To Grid, but this removes both sides of the double layer leaving
unsightly gaps.
* Writing a vtkGhostPoints array (on nodes) but this seems not to be used
by this filter (or Paraview at all?)
* Writing a vtkGhostLevels array (on elements). This correctly hides all
the ghost elements at the internal boundaries (great!) but still doesn't
let me do everything I want to. For example, the extracted surface looks
right, but the array limits still seem to be based on the max/min of the
external AND internal surfaces, so I suspect the internal ones are just
"hidden from view".
What's the right way to deal with this?
Thanks in advance.
Louie
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From richard.grenon at onera.fr Mon Jan 19 11:47:58 2015
From: richard.grenon at onera.fr (Richard Grenon)
Date: Mon, 19 Jan 2015 17:47:58 +0100
Subject: [Paraview] PV 420 unable to read state file from PV 410
In-Reply-To: <CADHSJjCpiM=WFDNYgFWdPs7aWYQJOmR=1dn7mwmNw0SheU6s6Q@mail.gmail.com>
References: <542A9896.7020201@onera.fr> <542AAEC7.7040405@onera.fr> <CADHSJjDdkdGTQ94TkUtoTn53B=196z7kJjS=Dp_pBm_2=_pwSw@mail.gmail.com> <542BB2F6.40209@onera.fr> <54AFE2D3.4050506@onera.fr>
<CADHSJjCpiM=WFDNYgFWdPs7aWYQJOmR=1dn7mwmNw0SheU6s6Q@mail.gmail.com>
Message-ID: <54BD353E.1070008@onera.fr>
Hello.
Same problem again with "merge blocks" filter with PV 4.3.1. Is it the
same version as PV 4.3.0. RC1 ?
I attached a picture showing the pipeline built from scratch (I do not
read a state file) and the error message. The data sets are the simple
Tecplot (Vislt) files sent in a previous mail.
Richard
Le 09/01/2015 16:54, Utkarsh Ayachit a ?crit :
> There have been changes merged in git/master since RC1. It should be
> fixed in the next RC.
>
> On Fri, Jan 9, 2015 at 9:16 AM, Richard Grenon <richard.grenon at onera.fr> wrote:
>> Hello,
>>
>> Same problem with PV 4.3.0 RC1 (tested on Linux 64 bits binaries)
>>
>> Best regards.
>>
>> Richard
>>
>>
>> Le 01/10/2014 09:53, Richard Grenon a ?crit :
>>> Hello Utkarsh.
>>>
>>> I attach an archive tar.gz file that contains two short structured
>>> datasets and two pvsm state files:
>>>
>>> * dataset1.tp = ASCII Tecplot file that contains an IxJ structured
>>> surface.
>>> * dataset2.tp = ASCII Tecplot file that contains an IxJ structured surface
>>> having a common boundary with the first one.
>>> * merge.pvsm: reproduces the bad plot with missing part of surface after
>>> MergeBlocks.
>>> * merge420.pvsm : no missing part after MergeBlocks, but error message.
>>>
>>> "merge.pvsm" and "merge420.pvsm" contain the same simple pipeline, but
>>> components were added in a different order.
>>>
>>> Richard
>>>
>>>
--
Richard GRENON
ONERA
Departement d'Aerodynamique Appliquee - DAAP/ACI
8 rue des Vertugadins
92190 MEUDON - FRANCE
phone : +33 1 46 73 42 17
fax : +33 1 46 73 41 46
mailto:Richard.Grenon at onera.fr
http://www.onera.fr
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From wascott at sandia.gov Mon Jan 19 16:08:04 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Mon, 19 Jan 2015 21:08:04 +0000
Subject: [Paraview] Renderview Comparative views
Message-ID: <d89ccae985f0437d80a2045ef225a488@ES05AMSNLNT.srn.sandia.gov>
Is there a way, with the comparative render view, to set what time the four viewports are at? If I have a user that is interested in looking at 4 times, not evenly distributed throughout the run, can he do this? How?
Thanks,
Alan
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From utkarsh.ayachit at kitware.com Mon Jan 19 16:11:01 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Mon, 19 Jan 2015 16:11:01 -0500
Subject: [Paraview] Renderview Comparative views
In-Reply-To: <d89ccae985f0437d80a2045ef225a488@ES05AMSNLNT.srn.sandia.gov>
References: <d89ccae985f0437d80a2045ef225a488@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <CADHSJjB5ECrHV0VUYk0j2tusJ_5KB1zBASt8pX1x02ZQnizQUw@mail.gmail.com>
In "Comparative View Inspector", add a new "track" from "Time" and
then manually entire the time values of interest for each view in the
widget under the "Time" combo-box.
On Mon, Jan 19, 2015 at 4:08 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> Is there a way, with the comparative render view, to set what time the four
> viewports are at? If I have a user that is interested in looking at 4
> times, not evenly distributed throughout the run, can he do this? How?
>
> Thanks,
>
> Alan
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
From wascott at sandia.gov Mon Jan 19 16:13:04 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Mon, 19 Jan 2015 21:13:04 +0000
Subject: [Paraview] [EXTERNAL] Re: Renderview Comparative views
In-Reply-To: <CADHSJjB5ECrHV0VUYk0j2tusJ_5KB1zBASt8pX1x02ZQnizQUw@mail.gmail.com>
References: <d89ccae985f0437d80a2045ef225a488@ES05AMSNLNT.srn.sandia.gov>
<CADHSJjB5ECrHV0VUYk0j2tusJ_5KB1zBASt8pX1x02ZQnizQUw@mail.gmail.com>
Message-ID: <b0f775222c4443e690189c6759f5c245@ES05AMSNLNT.srn.sandia.gov>
Of course. Should have thought of that. Thanks.
Alan
-----Original Message-----
From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
Sent: Monday, January 19, 2015 2:11 PM
To: Scott, W Alan
Cc: paraview at paraview.org
Subject: [EXTERNAL] Re: [Paraview] Renderview Comparative views
In "Comparative View Inspector", add a new "track" from "Time" and then manually entire the time values of interest for each view in the widget under the "Time" combo-box.
On Mon, Jan 19, 2015 at 4:08 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> Is there a way, with the comparative render view, to set what time the
> four viewports are at? If I have a user that is interested in looking
> at 4 times, not evenly distributed throughout the run, can he do this? How?
>
> Thanks,
>
> Alan
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
From wascott at sandia.gov Mon Jan 19 16:47:01 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Mon, 19 Jan 2015 21:47:01 +0000
Subject: [Paraview] [EXTERNAL] Re: Renderview Comparative views
In-Reply-To: <b0f775222c4443e690189c6759f5c245@ES05AMSNLNT.srn.sandia.gov>
References: <d89ccae985f0437d80a2045ef225a488@ES05AMSNLNT.srn.sandia.gov>
<CADHSJjB5ECrHV0VUYk0j2tusJ_5KB1zBASt8pX1x02ZQnizQUw@mail.gmail.com>
<b0f775222c4443e690189c6759f5c245@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <867da17aa417421e91851b09a8bcbc2c@ES05AMSNLNT.srn.sandia.gov>
OK, when I try what you suggest, using can.exo, I have a window of 2X2 viewports - i.e., 4 viewports. In the comparative view inspector, when I hit the blue +, I only see two entries. I want one for each viewport, or 4. Am I missing something?
Alan
-----Original Message-----
From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Scott, W Alan
Sent: Monday, January 19, 2015 2:13 PM
To: Utkarsh Ayachit
Cc: paraview at paraview.org
Subject: Re: [Paraview] [EXTERNAL] Re: Renderview Comparative views
Of course. Should have thought of that. Thanks.
Alan
-----Original Message-----
From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
Sent: Monday, January 19, 2015 2:11 PM
To: Scott, W Alan
Cc: paraview at paraview.org
Subject: [EXTERNAL] Re: [Paraview] Renderview Comparative views
In "Comparative View Inspector", add a new "track" from "Time" and then manually entire the time values of interest for each view in the widget under the "Time" combo-box.
On Mon, Jan 19, 2015 at 4:08 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> Is there a way, with the comparative render view, to set what time the
> four viewports are at? If I have a user that is interested in looking
> at 4 times, not evenly distributed throughout the run, can he do this? How?
>
> Thanks,
>
> Alan
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
_______________________________________________
Powered by www.kitware.com
Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
Search the list archives at: http://markmail.org/search/?q=ParaView
Follow this link to subscribe/unsubscribe:
http://public.kitware.com/mailman/listinfo/paraview
From utkarsh.ayachit at kitware.com Mon Jan 19 16:51:28 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Mon, 19 Jan 2015 16:51:28 -0500
Subject: [Paraview] [EXTERNAL] Re: Renderview Comparative views
In-Reply-To: <867da17aa417421e91851b09a8bcbc2c@ES05AMSNLNT.srn.sandia.gov>
References: <d89ccae985f0437d80a2045ef225a488@ES05AMSNLNT.srn.sandia.gov>
<CADHSJjB5ECrHV0VUYk0j2tusJ_5KB1zBASt8pX1x02ZQnizQUw@mail.gmail.com>
<b0f775222c4443e690189c6759f5c245@ES05AMSNLNT.srn.sandia.gov>
<867da17aa417421e91851b09a8bcbc2c@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <CADHSJjARLcSfxw_UZpQM6enURJH4+Bbv0Gbi4J5rjpzV44=Ldw@mail.gmail.com>
Try resizing the dock panel. It sometimes gets hidden under a scroll bar.
On Mon, Jan 19, 2015 at 4:47 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> OK, when I try what you suggest, using can.exo, I have a window of 2X2 viewports - i.e., 4 viewports. In the comparative view inspector, when I hit the blue +, I only see two entries. I want one for each viewport, or 4. Am I missing something?
>
> Alan
>
> -----Original Message-----
> From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Scott, W Alan
> Sent: Monday, January 19, 2015 2:13 PM
> To: Utkarsh Ayachit
> Cc: paraview at paraview.org
> Subject: Re: [Paraview] [EXTERNAL] Re: Renderview Comparative views
>
> Of course. Should have thought of that. Thanks.
>
> Alan
>
> -----Original Message-----
> From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
> Sent: Monday, January 19, 2015 2:11 PM
> To: Scott, W Alan
> Cc: paraview at paraview.org
> Subject: [EXTERNAL] Re: [Paraview] Renderview Comparative views
>
> In "Comparative View Inspector", add a new "track" from "Time" and then manually entire the time values of interest for each view in the widget under the "Time" combo-box.
>
> On Mon, Jan 19, 2015 at 4:08 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>> Is there a way, with the comparative render view, to set what time the
>> four viewports are at? If I have a user that is interested in looking
>> at 4 times, not evenly distributed throughout the run, can he do this? How?
>>
>> Thanks,
>>
>> Alan
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
From wascott at sandia.gov Mon Jan 19 17:07:21 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Mon, 19 Jan 2015 22:07:21 +0000
Subject: [Paraview] [EXTERNAL] Re: Renderview Comparative views
In-Reply-To: <CADHSJjARLcSfxw_UZpQM6enURJH4+Bbv0Gbi4J5rjpzV44=Ldw@mail.gmail.com>
References: <d89ccae985f0437d80a2045ef225a488@ES05AMSNLNT.srn.sandia.gov>
<CADHSJjB5ECrHV0VUYk0j2tusJ_5KB1zBASt8pX1x02ZQnizQUw@mail.gmail.com>
<b0f775222c4443e690189c6759f5c245@ES05AMSNLNT.srn.sandia.gov>
<867da17aa417421e91851b09a8bcbc2c@ES05AMSNLNT.srn.sandia.gov>
<CADHSJjARLcSfxw_UZpQM6enURJH4+Bbv0Gbi4J5rjpzV44=Ldw@mail.gmail.com>
Message-ID: <791aa569ec034678813ae73724ea1ffc@ES05AMSNLNT.srn.sandia.gov>
What scroll bar? :-)
Linux, local server, 4.3.0. Want me to call, and we can try to replicate? I haven't blown my .config files away, but could...
Alan
-----Original Message-----
From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
Sent: Monday, January 19, 2015 2:51 PM
To: Scott, W Alan
Cc: paraview at paraview.org
Subject: Re: [Paraview] [EXTERNAL] Re: Renderview Comparative views
Try resizing the dock panel. It sometimes gets hidden under a scroll bar.
On Mon, Jan 19, 2015 at 4:47 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> OK, when I try what you suggest, using can.exo, I have a window of 2X2 viewports - i.e., 4 viewports. In the comparative view inspector, when I hit the blue +, I only see two entries. I want one for each viewport, or 4. Am I missing something?
>
> Alan
>
> -----Original Message-----
> From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of
> Scott, W Alan
> Sent: Monday, January 19, 2015 2:13 PM
> To: Utkarsh Ayachit
> Cc: paraview at paraview.org
> Subject: Re: [Paraview] [EXTERNAL] Re: Renderview Comparative views
>
> Of course. Should have thought of that. Thanks.
>
> Alan
>
> -----Original Message-----
> From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
> Sent: Monday, January 19, 2015 2:11 PM
> To: Scott, W Alan
> Cc: paraview at paraview.org
> Subject: [EXTERNAL] Re: [Paraview] Renderview Comparative views
>
> In "Comparative View Inspector", add a new "track" from "Time" and then manually entire the time values of interest for each view in the widget under the "Time" combo-box.
>
> On Mon, Jan 19, 2015 at 4:08 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>> Is there a way, with the comparative render view, to set what time
>> the four viewports are at? If I have a user that is interested in
>> looking at 4 times, not evenly distributed throughout the run, can he do this? How?
>>
>> Thanks,
>>
>> Alan
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
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From utkarsh.ayachit at kitware.com Mon Jan 19 21:12:50 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Mon, 19 Jan 2015 21:12:50 -0500
Subject: [Paraview] [EXTERNAL] Re: Renderview Comparative views
In-Reply-To: <791aa569ec034678813ae73724ea1ffc@ES05AMSNLNT.srn.sandia.gov>
References: <d89ccae985f0437d80a2045ef225a488@ES05AMSNLNT.srn.sandia.gov>
<CADHSJjB5ECrHV0VUYk0j2tusJ_5KB1zBASt8pX1x02ZQnizQUw@mail.gmail.com>
<b0f775222c4443e690189c6759f5c245@ES05AMSNLNT.srn.sandia.gov>
<867da17aa417421e91851b09a8bcbc2c@ES05AMSNLNT.srn.sandia.gov>
<CADHSJjARLcSfxw_UZpQM6enURJH4+Bbv0Gbi4J5rjpzV44=Ldw@mail.gmail.com>
<791aa569ec034678813ae73724ea1ffc@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <CADHSJjDt5-iz0TnGMA-coNMXrVWXiauapSDfMmTfipWT-YHQCQ@mail.gmail.com>
Alan,
In your screenshot I see 4 entries for the time value: two columns :
A, B and two rows: 0, 1. You can manually enter values there.
Sometimes, only column A may be shown, that's because of the width is
too narrow -- not in your screenshot, however.
Utkarsh
On Mon, Jan 19, 2015 at 5:07 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> What scroll bar? :-)
>
> Linux, local server, 4.3.0. Want me to call, and we can try to replicate? I haven't blown my .config files away, but could...
>
> Alan
>
>
>
> -----Original Message-----
> From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
> Sent: Monday, January 19, 2015 2:51 PM
> To: Scott, W Alan
> Cc: paraview at paraview.org
> Subject: Re: [Paraview] [EXTERNAL] Re: Renderview Comparative views
>
> Try resizing the dock panel. It sometimes gets hidden under a scroll bar.
>
> On Mon, Jan 19, 2015 at 4:47 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>> OK, when I try what you suggest, using can.exo, I have a window of 2X2 viewports - i.e., 4 viewports. In the comparative view inspector, when I hit the blue +, I only see two entries. I want one for each viewport, or 4. Am I missing something?
>>
>> Alan
>>
>> -----Original Message-----
>> From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of
>> Scott, W Alan
>> Sent: Monday, January 19, 2015 2:13 PM
>> To: Utkarsh Ayachit
>> Cc: paraview at paraview.org
>> Subject: Re: [Paraview] [EXTERNAL] Re: Renderview Comparative views
>>
>> Of course. Should have thought of that. Thanks.
>>
>> Alan
>>
>> -----Original Message-----
>> From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
>> Sent: Monday, January 19, 2015 2:11 PM
>> To: Scott, W Alan
>> Cc: paraview at paraview.org
>> Subject: [EXTERNAL] Re: [Paraview] Renderview Comparative views
>>
>> In "Comparative View Inspector", add a new "track" from "Time" and then manually entire the time values of interest for each view in the widget under the "Time" combo-box.
>>
>> On Mon, Jan 19, 2015 at 4:08 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>>> Is there a way, with the comparative render view, to set what time
>>> the four viewports are at? If I have a user that is interested in
>>> looking at 4 times, not evenly distributed throughout the run, can he do this? How?
>>>
>>> Thanks,
>>>
>>> Alan
>>>
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
From wascott at sandia.gov Mon Jan 19 22:11:41 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Tue, 20 Jan 2015 03:11:41 +0000
Subject: [Paraview] [EXTERNAL] Re: Renderview Comparative views
In-Reply-To: <CADHSJjDt5-iz0TnGMA-coNMXrVWXiauapSDfMmTfipWT-YHQCQ@mail.gmail.com>
References: <d89ccae985f0437d80a2045ef225a488@ES05AMSNLNT.srn.sandia.gov>
<CADHSJjB5ECrHV0VUYk0j2tusJ_5KB1zBASt8pX1x02ZQnizQUw@mail.gmail.com>
<b0f775222c4443e690189c6759f5c245@ES05AMSNLNT.srn.sandia.gov>
<867da17aa417421e91851b09a8bcbc2c@ES05AMSNLNT.srn.sandia.gov>
<CADHSJjARLcSfxw_UZpQM6enURJH4+Bbv0Gbi4J5rjpzV44=Ldw@mail.gmail.com>
<791aa569ec034678813ae73724ea1ffc@ES05AMSNLNT.srn.sandia.gov>
<CADHSJjDt5-iz0TnGMA-coNMXrVWXiauapSDfMmTfipWT-YHQCQ@mail.gmail.com>
Message-ID: <39b90d8b60d24f7684f4dedf75a0f730@ES05AMSNLNT.srn.sandia.gov>
Stupid me. I thought there was a row per time, of course there isn't. This works fine. Thanks Utkarsh and Kitware!
Alan
-----Original Message-----
From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
Sent: Monday, January 19, 2015 7:13 PM
To: Scott, W Alan
Cc: paraview at paraview.org
Subject: Re: [Paraview] [EXTERNAL] Re: Renderview Comparative views
Alan,
In your screenshot I see 4 entries for the time value: two columns :
A, B and two rows: 0, 1. You can manually enter values there.
Sometimes, only column A may be shown, that's because of the width is too narrow -- not in your screenshot, however.
Utkarsh
On Mon, Jan 19, 2015 at 5:07 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> What scroll bar? :-)
>
> Linux, local server, 4.3.0. Want me to call, and we can try to replicate? I haven't blown my .config files away, but could...
>
> Alan
>
>
>
> -----Original Message-----
> From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
> Sent: Monday, January 19, 2015 2:51 PM
> To: Scott, W Alan
> Cc: paraview at paraview.org
> Subject: Re: [Paraview] [EXTERNAL] Re: Renderview Comparative views
>
> Try resizing the dock panel. It sometimes gets hidden under a scroll bar.
>
> On Mon, Jan 19, 2015 at 4:47 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>> OK, when I try what you suggest, using can.exo, I have a window of 2X2 viewports - i.e., 4 viewports. In the comparative view inspector, when I hit the blue +, I only see two entries. I want one for each viewport, or 4. Am I missing something?
>>
>> Alan
>>
>> -----Original Message-----
>> From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of
>> Scott, W Alan
>> Sent: Monday, January 19, 2015 2:13 PM
>> To: Utkarsh Ayachit
>> Cc: paraview at paraview.org
>> Subject: Re: [Paraview] [EXTERNAL] Re: Renderview Comparative views
>>
>> Of course. Should have thought of that. Thanks.
>>
>> Alan
>>
>> -----Original Message-----
>> From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
>> Sent: Monday, January 19, 2015 2:11 PM
>> To: Scott, W Alan
>> Cc: paraview at paraview.org
>> Subject: [EXTERNAL] Re: [Paraview] Renderview Comparative views
>>
>> In "Comparative View Inspector", add a new "track" from "Time" and then manually entire the time values of interest for each view in the widget under the "Time" combo-box.
>>
>> On Mon, Jan 19, 2015 at 4:08 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>>> Is there a way, with the comparative render view, to set what time
>>> the four viewports are at? If I have a user that is interested in
>>> looking at 4 times, not evenly distributed throughout the run, can he do this? How?
>>>
>>> Thanks,
>>>
>>> Alan
>>>
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
From andrew.porter at stfc.ac.uk Tue Jan 20 06:38:03 2015
From: andrew.porter at stfc.ac.uk (Andrew Porter)
Date: Tue, 20 Jan 2015 11:38:03 +0000
Subject: [Paraview] Specify TCP interface for pvserver to listen on
Message-ID: <54BE3E1B.3060208@stfc.ac.uk>
Hello,
In a nutshell; can one somehow specify the TCP interface on which
pvserver listens for connections?
The background:
I've been using pvserver on a remote machine and connecting to it from
behind a firewall without problems for a while.
However, the remote machine has recently been re-configured and the
login nodes now have two TCP interfaces, only one of which is publicly
accessible. Unfortunately the pvserver is binding to the 'private'
interface and thus I cannot connect to it.
I've tried using an ssh tunnel from the public interface to the private
interface but unfortunately I get an 'administratively prohibited'
message from ssh when I try to connect.
Does anyone know of a solution?
Thanks very much,
Andy.
--
Dr. Andrew Porter
Computational Scientist
Application Performance Engineering Group
Scientific Computing Department
STFC Daresbury Laboratory
Keckwick Lane
Daresbury
WA4 4AD
Tel. : +44 (0)1925 603607
email: andrew.porter at stfc.ac.uk
From livia.barazzetti at istb.unibe.ch Tue Jan 20 07:41:03 2015
From: livia.barazzetti at istb.unibe.ch (livia.barazzetti at istb.unibe.ch)
Date: Tue, 20 Jan 2015 12:41:03 +0000
Subject: [Paraview] Create a link for showing the same data array in
different views
Message-ID: <C8921E2F87E8024BBD6C59CB07C0F47D28D7853C@AAI-EXCH-MBX1.campus.unibe.ch>
Dear Paraview List,
I have different polydata with the same structure (same point data arrays). I am showing them in two 3D views side by side in the same layout window, and with the same camera view (I used the camera link feature).
Is it possible to link also the visible data array in the same two views? So, for example, if I switch from "solid color" to "array1" in the first view, also the data in the second view is updated and coloured according to "array1"? I tried to check the link manager but I could not recognize the properties for this effect (should be something like DataRepresentation or DisplayProperties?). I am using Paraview 4.1.
Thank you
Best regards
Livia Barazzetti
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From guillaume.duclaux at geo.uib.no Tue Jan 20 07:52:38 2015
From: guillaume.duclaux at geo.uib.no (Guillaume Duclaux)
Date: Tue, 20 Jan 2015 13:52:38 +0100
Subject: [Paraview] How to load a state file when connected to a server?
Message-ID: <30CD7BA2-5C96-4D24-B0DB-BBAAA1D535E5@geo.uib.no>
Hi,
I?m running a pvserver and connect to it from my local client. I can easily open files stored on the server, but can?t seem to manage to load a state file from the server.
When I?m connected to the server, the ?Load State?? window is showing my local machine file system and not the server file system?
Am I missing something?
I?ve also tried using the Python shell - but had no success either:
> from paraviewSimple import *
> connection = server manager.Connect(?server.name?,111111)
> LoadServer(?/home/gdu001/state.pvsm",connection)
ERROR: In /Users/kitware/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release-Python27/paraview/src/paraview/VTK/IO/XMLParser/vtkXMLParser.cxx, line 218
vtkPVXMLParser (0x7ff674477b30): Cannot open XML file: /home/gdu001/state.pvsm
Versions: Paraview 4.2.0 installed both locally (mac OS X, from 64-bit bundle) and on the server (redhead Linux, built from source). Running pvserver on the server.
Thanks in advance for your help.
Guillaume
-------------------------------------------
Dr Guillaume Duclaux
Department of Earth Science
University of Bergen
Allegaten, 41
N-5020 Bergen, Norway
Tel: + (47) 55 58 26 50
Fax: + (47) 55 58 36 60
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From sjster at gmail.com Tue Jan 20 11:02:32 2015
From: sjster at gmail.com (sj R)
Date: Tue, 20 Jan 2015 11:02:32 -0500
Subject: [Paraview] Parallel rendering of XDMF unstructured data
Message-ID: <CAPBPWZxyasxGKi_6VhBz3JnawtovVrcBwE3KjzB3yMS80Jtwxg@mail.gmail.com>
Hello,
Hello,
I have an unstructured mesh, with 2 million points, in a single
'HDF5/XDMF' file format that I am trying to visualize on our clusters. The
goal is to perform remote parallel rendering on our cluster ( 16 processors
per node and 64 GB memory) nodes using a client-server model.
Currently I load this file on a single node with 16 processes, apply the D3
filter to it, followed by the application of a 'Clip' filter. This dataset
contains time-steps and when I try to animate it over time, the memory
usage on the remote compute node increases with each time-step and this
eventually causes 'pvserver' to crash.
However, I can partition the data using D3 and write it out as '*.pvtu'
files. When I restart ParaView and read the '*.pvtu' files back in and
perform the same rendering tests, the performance seems to scale pretty
well and memory usage is kept to a minimum.
Is this something to do with the XDMF reader ? Is the D3 filter not being
applied correctly ?
Thanks,
Srijith Rajamohan
Computational Scientist
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From antoine.dechaume at sogeti.com Tue Jan 20 11:49:07 2015
From: antoine.dechaume at sogeti.com (DECHAUME, Antoine)
Date: Tue, 20 Jan 2015 16:49:07 +0000
Subject: [Paraview] Custom filter/reader
Message-ID: <54BE8702.5040505@sogeti.com>
Dear mailing list,
I would like to create a customisation of paraview to achieve the following :
* data of kind multi-group are stored in 2 files that have no available readers
* the first file contains the geometry, composed of several parts like geom1, geom2
* the second file contains the datasets bound to the geometry, composed of several datasets like data1, data2
* for my purposes, I'd like to create a pipeline that would look like the following in the pipeline browser
* builtin
* data1 (full geometry with dataset restricted to data1)
* geom1 (restriction of the parent node to a geometry part)
* geom2
* data2
* geom1
* geom2
After having read most of the wiki and other informations here and there, I am puzzled about how to tackle this in practice.
Is it possible to create a custom reader that would read the 2 files and would produce more than one pipeline source like data1 and data2 in the above example?
Furthermore, could a reader create the full pipeline as well?
Kindest regards,
Antoine.
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From utkarsh.ayachit at kitware.com Tue Jan 20 16:17:16 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Tue, 20 Jan 2015 16:17:16 -0500
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
Message-ID: <CADHSJjA+pfqoJM5NbvCcTWXWiMEh4MqLiWdYSrHHZ8zEdYcmkw@mail.gmail.com>
Folks,
ParaView 4.3.1 is now available for download. Checkout the release
notes on the Kitware blog [1].
As always, we look forward to your feedback [2].
Also stay tuned to the Kitware Blog [3] for upcoming features and
enhancements to ParaView, ParaView Catalyst, ParaViewWeb and much
more!
- The ParaView team
[1] http://www.kitware.com/blog/posts/view/825
[2] http://paraview.uservoice.com
[3] http://www.kitware.com/blog/
From furutaka.kazuyoshi at jaea.go.jp Wed Jan 21 02:38:06 2015
From: furutaka.kazuyoshi at jaea.go.jp (Kazuyoshi Furutaka)
Date: Wed, 21 Jan 2015 16:38:06 +0900 (JST)
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
In-Reply-To: <CADHSJjA+pfqoJM5NbvCcTWXWiMEh4MqLiWdYSrHHZ8zEdYcmkw@mail.gmail.com>
References: <CADHSJjA+pfqoJM5NbvCcTWXWiMEh4MqLiWdYSrHHZ8zEdYcmkw@mail.gmail.com>
Message-ID: <20150121.163806.74547358.furutaka.kazuyoshi@jaea.go.jp>
Hello,
The build from source (git branch v4.3.1) failed
on my linux machine (Fedora-21, i686);
[ 84%] Building CXX object ParaViewCore/ClientServerCore/Rendering/CMakeFiles/vtkPVClientServerCoreRendering.dir/vtkGeometrySliceRepresentation.cxx.o
/home/furutaka/work/ParaView/ParaView.git/ParaViewCore/ClientServerCore/Rendering/vtkGeometryRepresentation.cxx: In member function ?virtual void vtkGeometryRepresentation::UpdateColoringParameters()?:
/home/furutaka/work/ParaView/ParaView.git/ParaViewCore/ClientServerCore/Rendering/vtkGeometryRepresentation.cxx:579:23: error: ?class vtkMapper? has no member named ?SetFieldDataTupleId?
this->Mapper->SetFieldDataTupleId(0);
^
/home/furutaka/work/ParaView/ParaView.git/ParaViewCore/ClientServerCore/Rendering/vtkGeometryRepresentation.cxx:581:26: error: ?class vtkMapper? has no member named ?SetFieldDataTupleId?
this->LODMapper->SetFieldDataTupleId(0);
^
/home/furutaka/work/ParaView/ParaView.git/ParaViewCore/ClientServerCore/Rendering/vtkGeometryRepresentation.cxx: In member function ?virtual void vtkGeometryRepresentation::SetMapScalars(int)?:
/home/furutaka/work/ParaView/ParaView.git/ParaViewCore/ClientServerCore/Rendering/vtkGeometryRepresentation.cxx:681:5: error: ?VTK_COLOR_MODE_DIRECT_SCALARS? was not declared in this scope
VTK_COLOR_MODE_DIRECT_SCALARS,
^
ParaViewCore/ClientServerCore/Rendering/CMakeFiles/vtkPVClientServerCoreRendering.dir/build.make:330: recipe for target 'ParaViewCore/ClientServerCore/Rendering/CMakeFiles/vtkPVClientServerCoreRendering.dir/vtkGeometryRepresentation.cxx.o' failed
make[2]: *** [ParaViewCore/ClientServerCore/Rendering/CMakeFiles/vtkPVClientServerCoreRendering.dir/vtkGeometryRepresentation.cxx.o] Error 1
make[2]: *** Waiting for unfinished jobs....
Kazuyoshi
From: Utkarsh Ayachit <utkarsh.ayachit at kitware.com>
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
Date: Tue, 20 Jan 2015 16:17:16 -0500
> Folks,
>
> ParaView 4.3.1 is now available for download. Checkout the release
> notes on the Kitware blog [1].
>
> As always, we look forward to your feedback [2].
>
> Also stay tuned to the Kitware Blog [3] for upcoming features and
> enhancements to ParaView, ParaView Catalyst, ParaViewWeb and much
> more!
>
> - The ParaView team
>
> [1] http://www.kitware.com/blog/posts/view/825
> [2] http://paraview.uservoice.com
> [3] http://www.kitware.com/blog/
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
--
Kazuyoshi Furutaka
furutaka _dot_ kazuyoshi _at_ jaea _dot_ go _dot_ jp
From archaerolog at mail.ru Wed Jan 21 07:53:02 2015
From: archaerolog at mail.ru (Gena Bug)
Date: Wed, 21 Jan 2015 15:53:02 +0300
Subject: [Paraview] Fwd: Re: ANN: ParaView 4.3.1 is available for download
In-Reply-To: <54BF962A.3040903@mail.ru>
References: <54BF962A.3040903@mail.ru>
Message-ID: <54BFA12E.7070103@mail.ru>
-------- Forwarded Message --------
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
Date: Wed, 21 Jan 2015 15:06:02 +0300
From: Gena Bug <archaerolog at mail.ru>
To: Utkarsh Ayachit <utkarsh.ayachit at kitware.com>
Hi,
First of all -- thank you for this great release and especially for the
free user guide!
However I've noticed couple glitches on my debian testing amd64:
a) can't permanently change camera settings (Edit->Settings->Camera) --
default values restored after restart
b) it's really hard to work with advanced properties of Line Chart View
-- for example simply add notation to an axis is difficult! It would be
great to have separate window for such settings (as it was in previous
releases, 4.1 and earlier).
On 21.01.2015 00:17, Utkarsh Ayachit wrote:
> Folks,
>
> ParaView 4.3.1 is now available for download. Checkout the release
> notes on the Kitware blog [1].
>
> As always, we look forward to your feedback [2].
>
> Also stay tuned to the Kitware Blog [3] for upcoming features and
> enhancements to ParaView, ParaView Catalyst, ParaViewWeb and much
> more!
>
> - The ParaView team
>
> [1] http://www.kitware.com/blog/posts/view/825
> [2] http://paraview.uservoice.com
> [3] http://www.kitware.com/blog/
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
From cory.quammen at kitware.com Wed Jan 21 09:32:37 2015
From: cory.quammen at kitware.com (Cory Quammen)
Date: Wed, 21 Jan 2015 09:32:37 -0500
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
In-Reply-To: <20150121.163806.74547358.furutaka.kazuyoshi@jaea.go.jp>
References: <CADHSJjA+pfqoJM5NbvCcTWXWiMEh4MqLiWdYSrHHZ8zEdYcmkw@mail.gmail.com>
<20150121.163806.74547358.furutaka.kazuyoshi@jaea.go.jp>
Message-ID: <CAB5Fpx7gs9sVd52SUS=fWO7ycGBWF3q39H9e6CzfyPYjVJgEsA@mail.gmail.com>
Hi Kazuyoshi,
Did you update the ParaView submodules?
Try running
git submodule update --init
from within the ParaView source directory and compile again.
Hope that helps,
Cory
On Wed, Jan 21, 2015 at 2:38 AM, Kazuyoshi Furutaka <
furutaka.kazuyoshi at jaea.go.jp> wrote:
> Hello,
>
> The build from source (git branch v4.3.1) failed
> on my linux machine (Fedora-21, i686);
>
> [ 84%] Building CXX object
> ParaViewCore/ClientServerCore/Rendering/CMakeFiles/vtkPVClientServerCoreRendering.dir/vtkGeometrySliceRepresentation.cxx.o
> /home/furutaka/work/ParaView/ParaView.git/ParaViewCore/ClientServerCore/Rendering/vtkGeometryRepresentation.cxx:
> In member function ?virtual void
> vtkGeometryRepresentation::UpdateColoringParameters()?:
> /home/furutaka/work/ParaView/ParaView.git/ParaViewCore/ClientServerCore/Rendering/vtkGeometryRepresentation.cxx:579:23:
> error: ?class vtkMapper? has no member named ?SetFieldDataTupleId?
> this->Mapper->SetFieldDataTupleId(0);
> ^
> /home/furutaka/work/ParaView/ParaView.git/ParaViewCore/ClientServerCore/Rendering/vtkGeometryRepresentation.cxx:581:26:
> error: ?class vtkMapper? has no member named ?SetFieldDataTupleId?
> this->LODMapper->SetFieldDataTupleId(0);
> ^
> /home/furutaka/work/ParaView/ParaView.git/ParaViewCore/ClientServerCore/Rendering/vtkGeometryRepresentation.cxx:
> In member function ?virtual void
> vtkGeometryRepresentation::SetMapScalars(int)?:
> /home/furutaka/work/ParaView/ParaView.git/ParaViewCore/ClientServerCore/Rendering/vtkGeometryRepresentation.cxx:681:5:
> error: ?VTK_COLOR_MODE_DIRECT_SCALARS? was not declared in this scope
> VTK_COLOR_MODE_DIRECT_SCALARS,
> ^
> ParaViewCore/ClientServerCore/Rendering/CMakeFiles/vtkPVClientServerCoreRendering.dir/build.make:330:
> recipe for target
> 'ParaViewCore/ClientServerCore/Rendering/CMakeFiles/vtkPVClientServerCoreRendering.dir/vtkGeometryRepresentation.cxx.o'
> failed
> make[2]: ***
> [ParaViewCore/ClientServerCore/Rendering/CMakeFiles/vtkPVClientServerCoreRendering.dir/vtkGeometryRepresentation.cxx.o]
> Error 1
> make[2]: *** Waiting for unfinished jobs....
>
>
> Kazuyoshi
>
>
> From: Utkarsh Ayachit <utkarsh.ayachit at kitware.com>
> Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
> Date: Tue, 20 Jan 2015 16:17:16 -0500
>
> > Folks,
> >
> > ParaView 4.3.1 is now available for download. Checkout the release
> > notes on the Kitware blog [1].
> >
> > As always, we look forward to your feedback [2].
> >
> > Also stay tuned to the Kitware Blog [3] for upcoming features and
> > enhancements to ParaView, ParaView Catalyst, ParaViewWeb and much
> > more!
> >
> > - The ParaView team
> >
> > [1] http://www.kitware.com/blog/posts/view/825
> > [2] http://paraview.uservoice.com
> > [3] http://www.kitware.com/blog/
> > _______________________________________________
> > Powered by www.kitware.com
> >
> > Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
> >
> > Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
> >
> > Search the list archives at: http://markmail.org/search/?q=ParaView
> >
> > Follow this link to subscribe/unsubscribe:
> > http://public.kitware.com/mailman/listinfo/paraview
> --
> Kazuyoshi Furutaka
> furutaka _dot_ kazuyoshi _at_ jaea _dot_ go _dot_ jp
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
--
Cory Quammen
R&D Engineer
Kitware, Inc.
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From utkarsh.ayachit at kitware.com Wed Jan 21 09:44:15 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Wed, 21 Jan 2015 09:44:15 -0500
Subject: [Paraview] Fwd: Re: ANN: ParaView 4.3.1 is available for
download
In-Reply-To: <54BFA12E.7070103@mail.ru>
References: <54BF962A.3040903@mail.ru>
<54BFA12E.7070103@mail.ru>
Message-ID: <CADHSJjB69CjELfJsdABoe_ptX9G+8nZNxNqkmpe3uS0ZMSaiHw@mail.gmail.com>
Gena,
> a) can't permanently change camera settings (Edit->Settings->Camera) --
> default values restored after restart
If I am not mistaken, this was never supported, right? Mind adding a
feature request to the bug tracker so we don't forget about this?
Thanks.
> b) it's really hard to work with advanced properties of Line Chart View
> -- for example simply add notation to an axis is difficult! It would be
> great to have separate window for such settings (as it was in previous
> releases, 4.1 and earlier).
That's doable. See Chapter 9, Section 9.2. Or this blog post [1]
[1] http://www.kitware.com/blog/home/post/673
Utkarsh
From dave.demarle at kitware.com Wed Jan 21 10:45:44 2015
From: dave.demarle at kitware.com (David E DeMarle)
Date: Wed, 21 Jan 2015 10:45:44 -0500
Subject: [Paraview] Specify TCP interface for pvserver to listen on
In-Reply-To: <54BE3E1B.3060208@stfc.ac.uk>
References: <54BE3E1B.3060208@stfc.ac.uk>
Message-ID: <CANjZAi8g=7LAyEpKK821RfEYT3+XsBEpM1Tm5sQoyDR9MackNg@mail.gmail.com>
Try
> pvserver --hostname=IP.ADR.ON.PUB
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909
On Tue, Jan 20, 2015 at 6:38 AM, Andrew Porter <andrew.porter at stfc.ac.uk>
wrote:
> Hello,
>
> In a nutshell; can one somehow specify the TCP interface on which pvserver
> listens for connections?
>
> The background:
>
> I've been using pvserver on a remote machine and connecting to it from
> behind a firewall without problems for a while.
> However, the remote machine has recently been re-configured and the login
> nodes now have two TCP interfaces, only one of which is publicly
> accessible. Unfortunately the pvserver is binding to the 'private'
> interface and thus I cannot connect to it.
> I've tried using an ssh tunnel from the public interface to the private
> interface but unfortunately I get an 'administratively prohibited' message
> from ssh when I try to connect.
>
> Does anyone know of a solution?
>
> Thanks very much,
>
> Andy.
>
> --
> Dr. Andrew Porter
> Computational Scientist
> Application Performance Engineering Group
> Scientific Computing Department
> STFC Daresbury Laboratory
> Keckwick Lane
> Daresbury
> WA4 4AD
> Tel. : +44 (0)1925 603607
> email: andrew.porter at stfc.ac.uk
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/
> opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From ceccon at poli.ufrj.br Wed Jan 21 11:35:41 2015
From: ceccon at poli.ufrj.br (Pedro Ceccon Thurler)
Date: Wed, 21 Jan 2015 14:35:41 -0200
Subject: [Paraview] How to plot data from a specific point over time?
Message-ID: <CABX6FTx3tsubRrHMBRJOxsNs3gBqHg_F536JJY6b=3M8utpDUA@mail.gmail.com>
Hey guys!
I'm in trouble trying to make some plots in paraview.
For my analysis, it's important to plot data from a specific point over
time.
I'm trying some filters, but I'm not succeeding. Do you have some tips or
advices? Thank you for your attention.
Pedro Ceccon Thurler
Bolsista CNPq - Laborat?rio de Simula??o de Sistemas de Constru??o Naval
Departamento de Engenharia Naval e Oce?nica - UFRJ
Cel: (21) 9 8234-9794
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From utkarsh.ayachit at kitware.com Wed Jan 21 11:45:53 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Wed, 21 Jan 2015 11:45:53 -0500
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
In-Reply-To: <D0E53FA4.1FD72%Richard.C.Angelini.CIV@mail.mil>
References: <CADHSJjA+pfqoJM5NbvCcTWXWiMEh4MqLiWdYSrHHZ8zEdYcmkw@mail.gmail.com>
<D0E53FA4.1FD72%Richard.C.Angelini.CIV@mail.mil>
Message-ID: <CADHSJjAjQFku-TqfcwbtAvsAsWxF=L7cCVehs5QdfsrFMQ-rxQ@mail.gmail.com>
What are the errors you're getting? What cmake version are you using?
Dan, did the fix for hdf5 with cmake version get merged in time for
4.3.1?
On Wed, Jan 21, 2015 at 11:36 AM, Angelini, Richard C (Rick) CIV
USARMY ARL (US) <richard.c.angelini.civ at mail.mil> wrote:
> I?m having trouble building 4.3.1 on several systems where 4.2 built without
> issue. Is there a particular version of cmake that 4.3.1 needs to be built
> with?
>
> ________________________________
> Rick Angelini
> USArmy Research Laboratory
> CISD/HPC Architectures Team
> Phone: 410-278-6266
>
> From: Utkarsh Ayachit <utkarsh.ayachit at kitware.com>
> Date: Tuesday, January 20, 2015 at 4:17 PM
> To: ParaView <paraview at paraview.org>, ParaView Developers
> <paraview-developers at paraview.org>
> Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
>
> Folks,
>
> ParaView 4.3.1 is now available for download. Checkout the release
> notes on the Kitware blog [1].
>
> As always, we look forward to your feedback [2].
>
> Also stay tuned to the Kitware Blog [3] for upcoming features and
> enhancements to ParaView, ParaView Catalyst, ParaViewWeb and much
> more!
>
> - The ParaView team
>
> [1] http://www.kitware.com/blog/posts/view/825
> [2] http://paraview.uservoice.com
> [3] http://www.kitware.com/blog/
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
From richard.c.angelini.civ at mail.mil Wed Jan 21 11:36:49 2015
From: richard.c.angelini.civ at mail.mil (Angelini, Richard C (Rick) CIV USARMY ARL (US))
Date: Wed, 21 Jan 2015 16:36:49 +0000
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
In-Reply-To: <CADHSJjA+pfqoJM5NbvCcTWXWiMEh4MqLiWdYSrHHZ8zEdYcmkw@mail.gmail.com>
References: <CADHSJjA+pfqoJM5NbvCcTWXWiMEh4MqLiWdYSrHHZ8zEdYcmkw@mail.gmail.com>
Message-ID: <D0E53FA4.1FD72%Richard.C.Angelini.CIV@mail.mil>
I?m having trouble building 4.3.1 on several systems where 4.2 built without issue. Is there a particular version of cmake that 4.3.1 needs to be built with?
________________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: Utkarsh Ayachit <utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>
Date: Tuesday, January 20, 2015 at 4:17 PM
To: ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>, ParaView Developers <paraview-developers at paraview.org<mailto:paraview-developers at paraview.org>>
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
Folks,
ParaView 4.3.1 is now available for download. Checkout the release
notes on the Kitware blog [1].
As always, we look forward to your feedback [2].
Also stay tuned to the Kitware Blog [3] for upcoming features and
enhancements to ParaView, ParaView Catalyst, ParaViewWeb and much
more!
- The ParaView team
[1] http://www.kitware.com/blog/posts/view/825
[2] http://paraview.uservoice.com
[3] http://www.kitware.com/blog/
_______________________________________________
Powered by www.kitware.com
Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
Search the list archives at: http://markmail.org/search/?q=ParaView
Follow this link to subscribe/unsubscribe:
http://public.kitware.com/mailman/listinfo/paraview
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From danielbruno at gmail.com Wed Jan 21 11:50:31 2015
From: danielbruno at gmail.com (Daniel Bruno)
Date: Wed, 21 Jan 2015 14:50:31 -0200
Subject: [Paraview] How to plot data from a specific point over time?
In-Reply-To: <CABX6FTx3tsubRrHMBRJOxsNs3gBqHg_F536JJY6b=3M8utpDUA@mail.gmail.com>
References: <CABX6FTx3tsubRrHMBRJOxsNs3gBqHg_F536JJY6b=3M8utpDUA@mail.gmail.com>
Message-ID: <CAJ+axnDhHDqqb8jgDx0CAMC5GJObsu3EiFq7pVjxf3LnGtQVVg@mail.gmail.com>
Hi Pedro.
What's the problem you are facing to plot data over time for a certain
point more specifically?
Daniel.
On Wed, Jan 21, 2015 at 2:35 PM, Pedro Ceccon Thurler <ceccon at poli.ufrj.br>
wrote:
> Hey guys!
> I'm in trouble trying to make some plots in paraview.
> For my analysis, it's important to plot data from a specific point over
> time.
> I'm trying some filters, but I'm not succeeding. Do you have some tips or
> advices? Thank you for your attention.
>
> Pedro Ceccon Thurler
>
> Bolsista CNPq - Laborat?rio de Simula??o de Sistemas de Constru??o Naval
> Departamento de Engenharia Naval e Oce?nica - UFRJ
> Cel: (21) 9 8234-9794
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From dkxls23 at gmail.com Wed Jan 21 11:44:31 2015
From: dkxls23 at gmail.com (Armin Wehrfritz)
Date: Wed, 21 Jan 2015 18:44:31 +0200
Subject: [Paraview] How to plot data from a specific point over time?
In-Reply-To: <CABX6FTx3tsubRrHMBRJOxsNs3gBqHg_F536JJY6b=3M8utpDUA@mail.gmail.com>
References: <CABX6FTx3tsubRrHMBRJOxsNs3gBqHg_F536JJY6b=3M8utpDUA@mail.gmail.com>
Message-ID: <54BFD76F.8070301@gmail.com>
Have you tried the "Plot Selection Over Time" filter?
It's in "Filter->Data Analysis". You can select cell or point data.
-Armin
On 01/21/2015 06:35 PM, Pedro Ceccon Thurler wrote:
> Hey guys!
> I'm in trouble trying to make some plots in paraview.
> For my analysis, it's important to plot data from a specific point over
> time.
> I'm trying some filters, but I'm not succeeding. Do you have some tips
> or advices? Thank you for your attention.
>
> Pedro Ceccon Thurler
>
> Bolsista CNPq - Laborat?rio de Simula??o de Sistemas de Constru??o Naval
> Departamento de Engenharia Naval e Oce?nica - UFRJ
> Cel: (21) 9 8234-9794
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
From ceccon at poli.ufrj.br Wed Jan 21 11:57:45 2015
From: ceccon at poli.ufrj.br (Pedro Ceccon Thurler)
Date: Wed, 21 Jan 2015 14:57:45 -0200
Subject: [Paraview] How to plot data from a specific point over time?
In-Reply-To: <54BFD76F.8070301@gmail.com>
References: <CABX6FTx3tsubRrHMBRJOxsNs3gBqHg_F536JJY6b=3M8utpDUA@mail.gmail.com>
<54BFD76F.8070301@gmail.com>
Message-ID: <CABX6FTyrswVmdUaHAYdfOaD3LcoMhC++8RkVSHo5W67mZ8xnWg@mail.gmail.com>
The guys from the lab did an experiment and measured the residual stress on
some points with specific coordinates.
I have to measure the stress on the same points along time in my simulation
so i can compare the results with the real values and validate my model.
But I don't know how to do that.
Pedro Ceccon Thurler
Bolsista CNPq - Laborat?rio de Simula??o de Sistemas de Constru??o Naval
Departamento de Engenharia Naval e Oce?nica - UFRJ
Cel: (21) 9 8234-9794
2015-01-21 14:44 GMT-02:00 Armin Wehrfritz <dkxls23 at gmail.com>:
> Have you tried the "Plot Selection Over Time" filter?
> It's in "Filter->Data Analysis". You can select cell or point data.
>
> -Armin
>
>
>
>
> On 01/21/2015 06:35 PM, Pedro Ceccon Thurler wrote:
>
>> Hey guys!
>> I'm in trouble trying to make some plots in paraview.
>> For my analysis, it's important to plot data from a specific point over
>> time.
>> I'm trying some filters, but I'm not succeeding. Do you have some tips
>> or advices? Thank you for your attention.
>>
>> Pedro Ceccon Thurler
>>
>> Bolsista CNPq - Laborat?rio de Simula??o de Sistemas de Constru??o Naval
>> Departamento de Engenharia Naval e Oce?nica - UFRJ
>> Cel: (21) 9 8234-9794
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at http://www.kitware.com/
>> opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/
> opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From andy.bauer at kitware.com Wed Jan 21 11:58:46 2015
From: andy.bauer at kitware.com (Andy Bauer)
Date: Wed, 21 Jan 2015 11:58:46 -0500
Subject: [Paraview] How to plot data from a specific point over time?
In-Reply-To: <CABX6FTyrswVmdUaHAYdfOaD3LcoMhC++8RkVSHo5W67mZ8xnWg@mail.gmail.com>
References: <CABX6FTx3tsubRrHMBRJOxsNs3gBqHg_F536JJY6b=3M8utpDUA@mail.gmail.com>
<54BFD76F.8070301@gmail.com>
<CABX6FTyrswVmdUaHAYdfOaD3LcoMhC++8RkVSHo5W67mZ8xnWg@mail.gmail.com>
Message-ID: <CAMaOp+HwUs4tc-GAb4yQy0iPFV86+bU3UeY8=RNHxb0G2tHYTQ@mail.gmail.com>
For moving grids or grids that don't have a grid point exactly at the
coordinate you want to plot over time, you can use the probe filter to get
the desired location and then use the plot selection over time for that.
On Wed, Jan 21, 2015 at 11:57 AM, Pedro Ceccon Thurler <ceccon at poli.ufrj.br>
wrote:
> The guys from the lab did an experiment and measured the residual stress
> on some points with specific coordinates.
> I have to measure the stress on the same points along time in my
> simulation so i can compare the results with the real values and validate
> my model.
> But I don't know how to do that.
>
> Pedro Ceccon Thurler
>
> Bolsista CNPq - Laborat?rio de Simula??o de Sistemas de Constru??o Naval
> Departamento de Engenharia Naval e Oce?nica - UFRJ
> Cel: (21) 9 8234-9794
>
> 2015-01-21 14:44 GMT-02:00 Armin Wehrfritz <dkxls23 at gmail.com>:
>
> Have you tried the "Plot Selection Over Time" filter?
>> It's in "Filter->Data Analysis". You can select cell or point data.
>>
>> -Armin
>>
>>
>>
>>
>> On 01/21/2015 06:35 PM, Pedro Ceccon Thurler wrote:
>>
>>> Hey guys!
>>> I'm in trouble trying to make some plots in paraview.
>>> For my analysis, it's important to plot data from a specific point over
>>> time.
>>> I'm trying some filters, but I'm not succeeding. Do you have some tips
>>> or advices? Thank you for your attention.
>>>
>>> Pedro Ceccon Thurler
>>>
>>> Bolsista CNPq - Laborat?rio de Simula??o de Sistemas de Constru??o Naval
>>> Departamento de Engenharia Naval e Oce?nica - UFRJ
>>> Cel: (21) 9 8234-9794
>>>
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at http://www.kitware.com/
>>> opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at http://www.kitware.com/
>> opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From richard.c.angelini.civ at mail.mil Wed Jan 21 12:08:00 2015
From: richard.c.angelini.civ at mail.mil (Angelini, Richard C (Rick) CIV USARMY ARL (US))
Date: Wed, 21 Jan 2015 17:08:00 +0000
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
In-Reply-To: <D0E53FA4.1FD72%Richard.C.Angelini.CIV@mail.mil>
References: <CADHSJjA+pfqoJM5NbvCcTWXWiMEh4MqLiWdYSrHHZ8zEdYcmkw@mail.gmail.com>
<D0E53FA4.1FD72%Richard.C.Angelini.CIV@mail.mil>
Message-ID: <D0E54688.1FD81%Richard.C.Angelini.CIV@mail.mil>
I was using cmake-2.8.11 and I upgraded to cmake-3.1.0, but I?m still seeing errors. I?m currently dying in QT - I?ve seen these QCLUcene errors before, but not on the platforms that I?m currently testing the builds on ?. I believe that I get around this by going into the qt build directory and running ?make install? and the problem goes away.
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexSearcher::~QCLuceneIndexSearcher()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneTermQuery::QCLuceneTermQuery(QCLuceneTerm const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexReader::deleteDocuments(QCLuceneTerm const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexWriter::close()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLucenePhraseQuery::addTerm(QCLuceneTerm const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneTermQuery::~QCLuceneTermQuery()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneQueryPrivate::~QCLuceneQueryPrivate()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneStopAnalyzer::~QCLuceneStopAnalyzer()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneBooleanQuery::add(QCLuceneQuery*, bool, bool, bool)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneStandardAnalyzer::QCLuceneStandardAnalyzer()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexWriter::setMinMergeDocs(int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneStopAnalyzer::englishStopWords() const'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneDocument::clear()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneTerm::QCLuceneTerm(QString const&, QString const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexWriter::setMaxFieldLength(int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLucenePhraseQuery::QCLucenePhraseQuery()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneStandardAnalyzer::~QCLuceneStandardAnalyzer()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexWriter::addDocument(QCLuceneDocument&, QCLuceneAnalyzer&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneSearcher::search(QCLuceneQuery const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneDocument::QCLuceneDocument()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneQuery::toString() const'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneDocument::~QCLuceneDocument()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexReader::open(QString const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneDocument::add(QCLuceneField*)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexWriter::optimize()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneField::QCLuceneField(QString const&, QString const&, int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexReader::indexExists(QString const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneTerm::~QCLuceneTerm()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneDocumentPrivate::~QCLuceneDocumentPrivate()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneHits::document(int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexWriter::~QCLuceneIndexWriter()'________________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>
Date: Wednesday, January 21, 2015 at 11:36 AM
To: Utkarsh Ayachit <utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>, ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>, ParaView Developers <paraview-developers at paraview.org<mailto:paraview-developers at paraview.org>>
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
I?m having trouble building 4.3.1 on several systems where 4.2 built without issue. Is there a particular version of cmake that 4.3.1 needs to be built with?
________________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: Utkarsh Ayachit <utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>
Date: Tuesday, January 20, 2015 at 4:17 PM
To: ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>, ParaView Developers <paraview-developers at paraview.org<mailto:paraview-developers at paraview.org>>
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
Folks,
ParaView 4.3.1 is now available for download. Checkout the release
notes on the Kitware blog [1].
As always, we look forward to your feedback [2].
Also stay tuned to the Kitware Blog [3] for upcoming features and
enhancements to ParaView, ParaView Catalyst, ParaViewWeb and much
more!
- The ParaView team
[1] http://www.kitware.com/blog/posts/view/825
[2] http://paraview.uservoice.com
[3] http://www.kitware.com/blog/
_______________________________________________
Powered by www.kitware.com
Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
Search the list archives at: http://markmail.org/search/?q=ParaView
Follow this link to subscribe/unsubscribe:
http://public.kitware.com/mailman/listinfo/paraview
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From utkarsh.ayachit at kitware.com Wed Jan 21 12:39:25 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Wed, 21 Jan 2015 12:39:25 -0500
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
In-Reply-To: <D0E54688.1FD81%Richard.C.Angelini.CIV@mail.mil>
References: <CADHSJjA+pfqoJM5NbvCcTWXWiMEh4MqLiWdYSrHHZ8zEdYcmkw@mail.gmail.com>
<D0E53FA4.1FD72%Richard.C.Angelini.CIV@mail.mil>
<D0E54688.1FD81%Richard.C.Angelini.CIV@mail.mil>
Message-ID: <CADHSJjBtUN05DLru00H-E_rYxe7MFxQd9pjNqPwCnkM=mvFTqw@mail.gmail.com>
Rick,
Can you try using the "release" branch on the Superbuild repo (or the
v4.3.1 tag)? There have been quite few changes merged into git/master
of the repo since which may be causing these issues.
Utkarsh
On Wed, Jan 21, 2015 at 12:08 PM, Angelini, Richard C (Rick) CIV
USARMY ARL (US) <richard.c.angelini.civ at mail.mil> wrote:
> I was using cmake-2.8.11 and I upgraded to cmake-3.1.0, but I?m still seeing
> errors. I?m currently dying in QT - I?ve seen these QCLUcene errors
> before, but not on the platforms that I?m currently testing the builds on
> ?. I believe that I get around this by going into the qt build directory
> and running ?make install? and the problem goes away.
>
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneIndexSearcher::~QCLuceneIndexSearcher()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneTermQuery::QCLuceneTermQuery(QCLuceneTerm
> const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneIndexReader::deleteDocuments(QCLuceneTerm
> const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneIndexWriter::close()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLucenePhraseQuery::addTerm(QCLuceneTerm const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneTermQuery::~QCLuceneTermQuery()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneQueryPrivate::~QCLuceneQueryPrivate()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneStopAnalyzer::~QCLuceneStopAnalyzer()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneBooleanQuery::add(QCLuceneQuery*, bool,
> bool, bool)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to
> `QCLuceneStandardAnalyzer::QCLuceneStandardAnalyzer()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneIndexWriter::setMinMergeDocs(int)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneStopAnalyzer::englishStopWords() const'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneDocument::clear()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneTerm::QCLuceneTerm(QString const&, QString
> const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneIndexWriter::setMaxFieldLength(int)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLucenePhraseQuery::QCLucenePhraseQuery()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to
> `QCLuceneStandardAnalyzer::~QCLuceneStandardAnalyzer()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneIndexWriter::addDocument(QCLuceneDocument&,
> QCLuceneAnalyzer&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneSearcher::search(QCLuceneQuery const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneDocument::QCLuceneDocument()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneQuery::toString() const'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneDocument::~QCLuceneDocument()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneIndexReader::open(QString const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneDocument::add(QCLuceneField*)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneIndexWriter::optimize()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneField::QCLuceneField(QString const&, QString
> const&, int)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneIndexReader::indexExists(QString const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneTerm::~QCLuceneTerm()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneDocumentPrivate::~QCLuceneDocumentPrivate()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to `QCLuceneHits::document(int)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so:
> undefined reference to
> `QCLuceneIndexWriter::~QCLuceneIndexWriter()'________________________________
> Rick Angelini
> USArmy Research Laboratory
> CISD/HPC Architectures Team
> Phone: 410-278-6266
>
> From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil>
> Date: Wednesday, January 21, 2015 at 11:36 AM
> To: Utkarsh Ayachit <utkarsh.ayachit at kitware.com>, ParaView
> <paraview at paraview.org>, ParaView Developers
> <paraview-developers at paraview.org>
> Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
>
> I?m having trouble building 4.3.1 on several systems where 4.2 built without
> issue. Is there a particular version of cmake that 4.3.1 needs to be built
> with?
>
> ________________________________
> Rick Angelini
> USArmy Research Laboratory
> CISD/HPC Architectures Team
> Phone: 410-278-6266
>
> From: Utkarsh Ayachit <utkarsh.ayachit at kitware.com>
> Date: Tuesday, January 20, 2015 at 4:17 PM
> To: ParaView <paraview at paraview.org>, ParaView Developers
> <paraview-developers at paraview.org>
> Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
>
> Folks,
>
> ParaView 4.3.1 is now available for download. Checkout the release
> notes on the Kitware blog [1].
>
> As always, we look forward to your feedback [2].
>
> Also stay tuned to the Kitware Blog [3] for upcoming features and
> enhancements to ParaView, ParaView Catalyst, ParaViewWeb and much
> more!
>
> - The ParaView team
>
> [1] http://www.kitware.com/blog/posts/view/825
> [2] http://paraview.uservoice.com
> [3] http://www.kitware.com/blog/
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
From berk.geveci at kitware.com Wed Jan 21 12:44:24 2015
From: berk.geveci at kitware.com (Berk Geveci)
Date: Wed, 21 Jan 2015 12:44:24 -0500
Subject: [Paraview] ANNOUNCE: Kitware is hiring
Message-ID: <CAE32kpV30-_7pwgXLkumQj=NsAF48gFvr11uTBWr3OAt_XfwdA@mail.gmail.com>
Hi folks,
We are looking to hire visualization developers to our Scientific Computing
team. If you are a talented visualization researcher and developer with
strong C++ skills, please consider applying. You will join a great team
and work on many interesting and challenging technical problems - always
aiming to deliver robust and widely used software solutions.
For the full posting see:
http://tinyurl.com/l8sgvzw
JOB DESCRIPTION
Kitware is seeking to hire highly skilled Research and Development
Engineers (R&D Engineers) to join our Scientific Computing team and
contribute to our scientific and information visualization efforts.
Candidates will work to develop and improve leading visualization software
solutions.
Kitware collaborates on a multitude of basic and applied research and
development projects. Our collaborators include the top universities from
around the world, national research labs, medical device manufacturers, car
manufacturers, oil and gas companies, financial institutes, and many
others. The projects range from extending our open source C++ libraries and
applications, such as VTK, ParaView, and CMake, to developing proprietary
domain-specific vertical applications for a wide array of platforms
including web and mobile devices.
By joining our team you will participate in a dynamic work environment with
exceptionally talented and friendly coworkers who are committed to
high-quality development practices. You will collaborate with esteemed
researchers from around the world by:
* Designing and developing scalable data analysis and visualization tools
for use by researchers and professionals from various domains;
* Solving a wide array of problems ranging from developing distributed
memory parallel algorithms for data analysis, optimizing distributed
parallel codes to compiling and maintaining software on supercomputers.
* Designing and developing tools to improve scientific data analysis
workflows;
* Contributing to and supporting our dynamic open source communities built
around several of our open source tools.
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From leonardopessanha74 at gmail.com Wed Jan 21 13:00:36 2015
From: leonardopessanha74 at gmail.com (=?UTF-8?Q?L=C3=A9o_Pessanha?=)
Date: Wed, 21 Jan 2015 16:00:36 -0200
Subject: [Paraview] Immersive VRPN - Paraview - CAVE display questions
Message-ID: <CAE=GJrYx2-z3Zrbox0YHSj3QGLC2SroazH_eO5sUk8CUoJ30EQ@mail.gmail.com>
Hello, my name is Leonardo Pessanha and i work at the Computational Methods
and Engineering lab at COPPE-UFRJ in a scientific visualization project and
i've facing some problems dealing with immesive paraview
I am working in a Windows 7 - 64 bit environment
I've compiled paraview 4.0.1 with qt 4.8.2 - Microsoft MPI (4.2.4400.0) -
vrpn 7.31 using VS2008
My stereoscopic system is passive and i am using the
--stereo-type=SplitViewportHorizontal flag
My tracking system is from ARTrack, and so far, i am only interested in the
wand
interactions, letting the headtracking for later
First, i would like to know if there's any major changes/fixes in the
immersive part of paraview from the 4.0.1 to the 4.2.0 that justifies a new
compilation. It would be positive?
After setting up the server and loading the VRPN plugin I've succeeded
adding the grab interaction with the Model Transform Matrix but i had some
obstacles
It took me a while to understand that my center of rotation was 0 , 0 , 0 -
and i would like to know if there's a way of changing that. My data is
usually VTK Structured_Point and the format uses the 0 , 0 , 0 as the lower
left point of the data, so it would be useful to change the center of
rotation to the center of the object.
------------
Sometimes while doing translation i have a weird flickering movement that
i've managed to control using the TrackerTransform value
1 0 0 1
0 1 0 1
0 0 1 1
0 0 0 1
I don't know why it worked, and i don't know why it doesn't work changing
some of the matrix values, so i would like to understand a little better
since i am a little blind in that aspect
------------
Right now i am trying to find a solution on the model illumination. I don't
know why but only the backface of my model is illuminated. It's like the
illumination camera position does not change at all, only the view camera.
A way around that is flipping the normals but it does not solve my problem
since only a part of the model is affected by the flip
------------
I've read in the participants page that the ARL contributed with the CAVE
display. It would be a good idea to contact them?
I would be glad to share more details if it's needed.
I would really appreciate if someone could help in any of this aspects.
Thanks in advance
Leonardo Pessanha,
LAMCE-GRVa/COPPE/URFJ
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From burlen.loring at gmail.com Wed Jan 21 13:36:07 2015
From: burlen.loring at gmail.com (Burlen Loring)
Date: Wed, 21 Jan 2015 10:36:07 -0800
Subject: [Paraview] building cosmo tools
Message-ID: <54BFF197.3040607@gmail.com>
Hi All,
I need to build CosmoTools extensions in ParaView. There are some
dependencies that I'm having a hard time locating. For example
"GenericIO". Web search turns up nill, and the URL listed in the super
build(git://kwsource.kitwarein.com/genericio/genericio.git) seems to be
either private or bad. Anyone know where I can get this?
Thanks
Burlen
From iinmgc00 at udc.es Wed Jan 21 16:58:46 2015
From: iinmgc00 at udc.es (Manuel =?utf-8?Q?Gonz=C3=A1lez?=)
Date: Wed, 21 Jan 2015 22:58:46 +0100 (CET)
Subject: [Paraview] Display user-defined point and cell IDs from Ensight6
file as labels
Message-ID: <287077896.12441410.1421877526916.JavaMail.zimbra@udc.es>
Hi,
I need to display (as labels) the user-defined point IDs and cell IDs in ASCII Ensight6 geometry files. These IDs are neither zero-based nor contiguous.
Ensight does it correctly, but Paraview displays zero-based contiguous IDs instead of the user-defined IDs given in the file.
The user-defined IDs neither show in the spreadsheet view of Paraview.
I send attached a very simple example:
ensight6_case.case data file (case).
ensight6_geometry.geo data file (geometry). Point IDs=3,5,32,33. Cell IDs=10,20.
Ensight.PNG Ensight screenshot, displaying used-defined IDs.
Paraview.PNG Paraview screenshot, not displaying used-defined IDs.
Paraview_state.zip Paraview state file after the screenshot.
ens_checker_output.txt Ensight checker output, showing that the file format is correct.
For your information, I copy here the attached geometry file (ensight6_geometry.geo):
---- START OF FILE: ensight6_geometry.geo ----
This is a test file
ASCII
node id given
element id given
coordinates
4
3 0.00000e+00 0.00000e+00 0.00000e+00
5 6.90183e-01 0.00000e+00 0.00000e+00
32 0.00000e+00 5.94416e-01 0.00000e+00
33 3.45092e-01 2.97208e-01 0.00000e+00
part 1
description
tria3
2
10 3 5 33
20 32 3 33
---- END OF FILE: ensight6_geometry.geo ----
To reproduce my problem in Paraview 4.3.1 64 bit on Windows 7:
Open the .case file and make it visible in the Pipeline Browser.
Select all cells, activate Cell Labels = ID in the Selection Display Inspector.
Select all points, activate Point Labels = ID in the Selection Display Inspector.
I know I could workaround it by also storing the used-defined IDs as scalar fields per point and per cell. But this forces me to generate 2 additional files (point field and cell field) for each .geo file, thus triplicating the number of files for my transient data.
Would it be possible with a different file format? I mean, is there any other ASCII file format that supports used-defined point and cell IDs that Paraview can read and display as labels?
I asked I similar question 5 years ago for the Ensight Gold format, but I did not get a solution:
http://markmail.org/message/vlwntmzmbcbdfpzw
Regards,
Manuel
Associate Professor
University of A Coru?a, Spain
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From furutaka.kazuyoshi at jaea.go.jp Wed Jan 21 18:05:06 2015
From: furutaka.kazuyoshi at jaea.go.jp (Kazuyoshi Furutaka)
Date: Thu, 22 Jan 2015 08:05:06 +0900 (JST)
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
In-Reply-To: <CAB5Fpx7gs9sVd52SUS=fWO7ycGBWF3q39H9e6CzfyPYjVJgEsA@mail.gmail.com>
References: <CADHSJjA+pfqoJM5NbvCcTWXWiMEh4MqLiWdYSrHHZ8zEdYcmkw@mail.gmail.com>
<20150121.163806.74547358.furutaka.kazuyoshi@jaea.go.jp>
<CAB5Fpx7gs9sVd52SUS=fWO7ycGBWF3q39H9e6CzfyPYjVJgEsA@mail.gmail.com>
Message-ID: <20150122.080506.449440093.furutaka.kazuyoshi@jaea.go.jp>
Hi Cory,
I could build it after the `git submodule update --init`
command. Thanks!
(Well, I must confess that I've heard about the command
but completely forgotten... I wonder if I can automate
the update of the submodules...)
Kazuyoshi
From: Cory Quammen <cory.quammen at kitware.com>
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
Date: Wed, 21 Jan 2015 09:32:37 -0500
> Did you update the ParaView submodules?
>
> Try running
>
> git submodule update --init
>
> from within the ParaView source directory and compile again.
--
Kazuyoshi Furutaka
furutaka _dot_ kazuyoshi _at_ jaea _dot_ go _dot_ jp
From cory.quammen at kitware.com Wed Jan 21 18:11:52 2015
From: cory.quammen at kitware.com (Cory Quammen)
Date: Wed, 21 Jan 2015 18:11:52 -0500
Subject: [Paraview] [Paraview-developers] ANN: ParaView 4.3.1 is
available for download
In-Reply-To: <20150122.080506.449440093.furutaka.kazuyoshi@jaea.go.jp>
References: <CADHSJjA+pfqoJM5NbvCcTWXWiMEh4MqLiWdYSrHHZ8zEdYcmkw@mail.gmail.com>
<20150121.163806.74547358.furutaka.kazuyoshi@jaea.go.jp>
<CAB5Fpx7gs9sVd52SUS=fWO7ycGBWF3q39H9e6CzfyPYjVJgEsA@mail.gmail.com>
<20150122.080506.449440093.furutaka.kazuyoshi@jaea.go.jp>
Message-ID: <CAB5Fpx6CkbPwL1wfjeQ4aK9hyhSNgqKvS_VWFLy5aYovuqneFg@mail.gmail.com>
Kazuyoshi,
No problem. We all forget to update the submodules from time to time :-)
Thanks,
Cory
On Wed, Jan 21, 2015 at 6:05 PM, Kazuyoshi Furutaka <
furutaka.kazuyoshi at jaea.go.jp> wrote:
> Hi Cory,
>
> I could build it after the `git submodule update --init`
> command. Thanks!
> (Well, I must confess that I've heard about the command
> but completely forgotten... I wonder if I can automate
> the update of the submodules...)
>
> Kazuyoshi
>
> From: Cory Quammen <cory.quammen at kitware.com>
> Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
> Date: Wed, 21 Jan 2015 09:32:37 -0500
>
> > Did you update the ParaView submodules?
> >
> > Try running
> >
> > git submodule update --init
> >
> > from within the ParaView source directory and compile again.
> --
> Kazuyoshi Furutaka
> furutaka _dot_ kazuyoshi _at_ jaea _dot_ go _dot_ jp
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Search the list archives at:
> http://markmail.org/search/?q=Paraview-developers
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview-developers
>
--
Cory Quammen
R&D Engineer
Kitware, Inc.
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From richard.grenon at onera.fr Thu Jan 22 05:06:36 2015
From: richard.grenon at onera.fr (Richard Grenon)
Date: Thu, 22 Jan 2015 11:06:36 +0100
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
Message-ID: <54C0CBAC.6070502@onera.fr>
Hello.
I still have a problem with the "merge blocks" filter in Paraview 4.3.1
(see my attached picture) so I must stay on PV 4.1.0 if I want to use
this filter.
I found this problem first in PV 4.2.0.( see all messages in
http://markmail.org/message/fvatgidqbvnufgi6 subject)
It was said that this problem was related to the bug
http://www.paraview.org/Bug/view.php?id=15022 that is now marked as
fixed, but "merge blocks" still fails.
I found also this problem in PV 4.3.0 RC1 ? Is the PV 4.3.1 version the
same as PV 4.3.0 RC1 ?
Regards.
Richard
--
Richard GRENON
ONERA
Departement d'Aerodynamique Appliquee - DAAP/ACI
8 rue des Vertugadins
92190 MEUDON - FRANCE
phone : +33 1 46 73 42 17
fax : +33 1 46 73 41 46
mailto:Richard.Grenon at onera.fr
http://www.onera.fr
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From grothausmann.roman at mh-hannover.de Thu Jan 22 05:21:34 2015
From: grothausmann.roman at mh-hannover.de (Dr. Roman Grothausmann)
Date: Thu, 22 Jan 2015 11:21:34 +0100
Subject: [Paraview] compile itk (VTKGlue ON) with vtk from paraview
Message-ID: <54C0CF2E.3060106@mh-hannover.de>
Dear mailing list members,
What configuration is needed to compile itk (4.6.1) with VTKGlue enabled with
vtk from paraview (4.3.1) in order to compile Paraview plugins making use of ITK
and VTK?
If I configure ITK to with:
BUILD_SHARED_LIBS ON
Module_ITKVtkGlue ON
VTK_DIR /opt/paraview-4.3.1_git/lib/cmake/paraview-4.3
cmake complains about a missing VTKTargets.cmake even though
PARAVIEW_INSTALL_DEVELOPMENT_FILES was set to ON. After a
cp VTK/VTKTargets.cmake /opt/paraview-4.3.1_git/lib/cmake/paraview-4.3/
cmake is happy but I get linker errors at the end of the compilation of ITK when
the VTKGlue is due:
Linking CXX shared library ../../../../lib/libITKVtkGlue-4.6.so
/usr/bin/ld: cannot find -lvtkSciberQuest
/usr/bin/ld: cannot find -lvtkEyeDomeLighting
/usr/bin/ld: cannot find -lvtkQvis
/usr/bin/ld: cannot find -lvtkPointSpriteRendering
/usr/bin/ld: cannot find -lvtkPVPythonCatalyst
/usr/bin/ld: cannot find -lvtkPointSpriteGraphics
/usr/bin/ld: cannot find -lvtkUtilitiesPythonInitializer
Switching off all PV plugin builds only leaves:
Linking CXX shared library ../../../../lib/libITKVtkGlue-4.6.so
/usr/bin/ld: cannot find -lvtkPVPythonCatalyst
/usr/bin/ld: cannot find -lvtkUtilitiesPythonInitializer
However, the files are there:
find /opt/paraview-4.3.1_git/ -name '*vtkPVPythonCatalyst*so*'
/opt/paraview-4.3.1_git/lib/paraview-4.3/site-packages/vtk/vtkPVPythonCatalystPython.so
/opt/paraview-4.3.1_git/lib/paraview-4.3/libvtkPVPythonCatalyst-pv4.3.so.1
/opt/paraview-4.3.1_git/lib/paraview-4.3/libvtkPVPythonCatalystPython27D-pv4.3.so.1
/opt/paraview-4.3.1_git/lib/paraview-4.3/libvtkPVPythonCatalyst-pv4.3.so
/opt/paraview-4.3.1_git/lib/paraview-4.3/libvtkPVPythonCatalystPython27D-pv4.3.so
find /opt/paraview-4.3.1_git/ -name '*vtkUtilitiesPythonInitializer*so*'
/opt/paraview-4.3.1_git/lib/paraview-4.3/libvtkUtilitiesPythonInitializer-pv4.3.so.1
/opt/paraview-4.3.1_git/lib/paraview-4.3/libvtkUtilitiesPythonInitializer-pv4.3.so
Adding the abs. file locations to the build command does not help nor does
-L/opt/paraview-4.3.1_git/lib/paraview-4.3/
Using the build dir of VTK in PV-tree instead for ITK does not help either:
VTK_DIR /opt/compilation/ParaView-v4.3.1/build/VTK
If I configure ITK to with:
BUILD_SHARED_LIBS OFF
I get linker errors in the last stage when compiling a PV plugin that makes use
of VTK and ITK:
/usr/bin/ld:
/opt/compilation/InsightToolkit-4.6.1/build/lib/libitkvnl_algo-4.6.a(vnl_real_eigensystem.cxx.o):
relocation R_X86_64_32 against `.rodata.str1.8' can not be used when making a
shared object; recompile with -fPIC
/opt/compilation/InsightToolkit-4.6.1/build/lib/libitkvnl_algo-4.6.a: could not
read symbols: Bad value
After I've added
CMAKE_CXX_FLAGS -fPIC
to Paraview and ITK and recompiled both I get:
/usr/bin/ld:
/opt/compilation/InsightToolkit-4.6.1/build/lib/libitkv3p_netlib-4.6.a(dlamch.c.o):
relocation R_X86_64_32 against `.bss' can not be used when making a shared
object; recompile with -fPIC
/opt/compilation/InsightToolkit-4.6.1/build/lib/libitkv3p_netlib-4.6.a: could
not read symbols: Bad value
What am I missing in my configuration of PV and ITK?
When and where should I specify:
CMAKE_CXX_FLAGS -fPIC
BUILD_SHARED_LIBS ON/OFF
Is this the right VTK_DIR specification for ITK:
/opt/compilation/ParaView-v4.3.1/build/VTK
or
/opt/paraview-4.3.1_git/lib/cmake/paraview-4.3
Many thanks for any help or hints.
Roman
--
Dr. Roman Grothausmann
Tomographie und Digitale Bildverarbeitung
Tomography and Digital Image Analysis
Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
Medizinische Hochschule Hannover
Carl-Neuberg-Str. 1
D-30625 Hannover
Tel. +49 511 532-9574
From richard.c.angelini.civ at mail.mil Thu Jan 22 07:55:03 2015
From: richard.c.angelini.civ at mail.mil (Angelini, Richard C (Rick) CIV USARMY ARL (US))
Date: Thu, 22 Jan 2015 12:55:03 +0000
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
In-Reply-To: <D0E54688.1FD81%Richard.C.Angelini.CIV@mail.mil>
References: <CADHSJjA+pfqoJM5NbvCcTWXWiMEh4MqLiWdYSrHHZ8zEdYcmkw@mail.gmail.com>
<D0E53FA4.1FD72%Richard.C.Angelini.CIV@mail.mil>
<D0E54688.1FD81%Richard.C.Angelini.CIV@mail.mil>
Message-ID: <D0E65C8B.1FDBA%Richard.C.Angelini.CIV@mail.mil>
FYI ? as I thought, manually running ?make install? allowed me to get past the QCLucene errors as it has in the past. Looks like I then made it all of the way through to the paraview before it died with some python class errors. Looks like cmake is picking up my system python instead of the one that I?m building as part of the ParaView distro. That?s new. How do I get it to pick up the Paraview/python not the system python?
________________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>
Date: Wednesday, January 21, 2015 at 12:08 PM
To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>, Utkarsh Ayachit <utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>, ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>, ParaView Developers <paraview-developers at paraview.org<mailto:paraview-developers at paraview.org>>
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
I was using cmake-2.8.11 and I upgraded to cmake-3.1.0, but I?m still seeing errors. I?m currently dying in QT - I?ve seen these QCLUcene errors before, but not on the platforms that I?m currently testing the builds on ?. I believe that I get around this by going into the qt build directory and running ?make install? and the problem goes away.
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexSearcher::~QCLuceneIndexSearcher()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneTermQuery::QCLuceneTermQuery(QCLuceneTerm const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexReader::deleteDocuments(QCLuceneTerm const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexWriter::close()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLucenePhraseQuery::addTerm(QCLuceneTerm const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneTermQuery::~QCLuceneTermQuery()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneQueryPrivate::~QCLuceneQueryPrivate()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneStopAnalyzer::~QCLuceneStopAnalyzer()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneBooleanQuery::add(QCLuceneQuery*, bool, bool, bool)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneStandardAnalyzer::QCLuceneStandardAnalyzer()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexWriter::setMinMergeDocs(int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneStopAnalyzer::englishStopWords() const'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneDocument::clear()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneTerm::QCLuceneTerm(QString const&, QString const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexWriter::setMaxFieldLength(int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLucenePhraseQuery::QCLucenePhraseQuery()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneStandardAnalyzer::~QCLuceneStandardAnalyzer()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexWriter::addDocument(QCLuceneDocument&, QCLuceneAnalyzer&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneSearcher::search(QCLuceneQuery const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneDocument::QCLuceneDocument()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneQuery::toString() const'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneDocument::~QCLuceneDocument()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexReader::open(QString const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneDocument::add(QCLuceneField*)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexWriter::optimize()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneField::QCLuceneField(QString const&, QString const&, int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexReader::indexExists(QString const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneTerm::~QCLuceneTerm()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneDocumentPrivate::~QCLuceneDocumentPrivate()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneHits::document(int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/libQtHelp.so: undefined reference to `QCLuceneIndexWriter::~QCLuceneIndexWriter()'________________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>
Date: Wednesday, January 21, 2015 at 11:36 AM
To: Utkarsh Ayachit <utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>, ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>, ParaView Developers <paraview-developers at paraview.org<mailto:paraview-developers at paraview.org>>
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
I?m having trouble building 4.3.1 on several systems where 4.2 built without issue. Is there a particular version of cmake that 4.3.1 needs to be built with?
________________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: Utkarsh Ayachit <utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>
Date: Tuesday, January 20, 2015 at 4:17 PM
To: ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>, ParaView Developers <paraview-developers at paraview.org<mailto:paraview-developers at paraview.org>>
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
Folks,
ParaView 4.3.1 is now available for download. Checkout the release
notes on the Kitware blog [1].
As always, we look forward to your feedback [2].
Also stay tuned to the Kitware Blog [3] for upcoming features and
enhancements to ParaView, ParaView Catalyst, ParaViewWeb and much
more!
- The ParaView team
[1] http://www.kitware.com/blog/posts/view/825
[2] http://paraview.uservoice.com
[3] http://www.kitware.com/blog/
_______________________________________________
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From richard.c.angelini.civ at mail.mil Thu Jan 22 08:44:37 2015
From: richard.c.angelini.civ at mail.mil (Angelini, Richard C (Rick) CIV USARMY ARL (US))
Date: Thu, 22 Jan 2015 13:44:37 +0000
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
In-Reply-To: <D0E65C8B.1FDBA%Richard.C.Angelini.CIV@mail.mil>
References: <CADHSJjA+pfqoJM5NbvCcTWXWiMEh4MqLiWdYSrHHZ8zEdYcmkw@mail.gmail.com>
<D0E53FA4.1FD72%Richard.C.Angelini.CIV@mail.mil>
<D0E54688.1FD81%Richard.C.Angelini.CIV@mail.mil>
<D0E65C8B.1FDBA%Richard.C.Angelini.CIV@mail.mil>
Message-ID: <D0E6674C.1FDD1%Richard.C.Angelini.CIV@mail.mil>
I reran ?ccmake? in the paraview build directory and changed python to
point to the one in the Paraview build rather than the system python, and
I now have a clean build. So, there are a couple of issues:
QCLucene ? why does it fail and require a manual ?make install? to complete
Python ? why isnt? cmake picking up python from the build directory?
It seems to have ignored the CMAKE_INSTALL_PREFIX directive
As far as I know, these are ?new? issues. I?m building on a generic RHEL5
workstation for the first build. They get much more difficult on the HPC
systems.
cmake -DCMAKE_INSTALL_PREFIX:PATH=/home/angel/pv-test/${version} \
-Ddownload_location=`pwd`/../Downloads \
-DParaView_FROM_GIT=OFF \
-DParaView_URL=`pwd`/../Downloads/ParaView-v4.3.1-source.tar.gz \
-DCMAKE_BUILD_TYPE=Release \
-DENABLE_visitbridge:BOOL=ON \
-DENABLE_cgns=ON \
-DENABLE_boost=ON \
-DENABLE_ffmpeg=ON \
-DENABLE_hdf5=ON \
-DENABLE_matplotlib=ON \
-DENABLE_mesa=OFF \
-DENABLE_mpi=ON \
-DENABLE_numpy=ON \
-DENABLE_paraview=ON \
-DENABLE_python=ON \
-DENABLE_qt=ON \
-DENABLE_silo=ON \
-DENABLE_szip=ON \
-Dqt_DISABLE_WEBKIT=OFF \
-DUSE_SYSTEM_mpi=OFF ../Source
make -j 8 install
_
_______________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil>
Date: Thursday, January 22, 2015 at 7:55 AM
To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil>, Utkarsh Ayachit
<utkarsh.ayachit at kitware.com>, ParaView <paraview at paraview.org>
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
>FYI ? as I thought, manually running ?make install? allowed me to get
>past the QCLucene errors as it has in the past. Looks like I then
>made it all of the way through to the paraview before it died with some
>python class errors. Looks like cmake
> is picking up my system python instead of the one that I?m building as
>part of the ParaView distro. That?s new. How do I get it to pick up
>the Paraview/python not the system python?
>
>
>
>________________________________
>Rick Angelini
>USArmy Research Laboratory
>CISD/HPC Architectures Team
>Phone: 410-278-6266
>
>
>
>
>From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil>
>Date: Wednesday, January 21, 2015 at 12:08 PM
>To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil>, Utkarsh Ayachit
><utkarsh.ayachit at kitware.com>, ParaView <paraview at paraview.org>,
> ParaView Developers <paraview-developers at paraview.org>
>Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
>
>
>>I was using cmake-2.8.11 and I upgraded to cmake-3.1.0, but I?m still
>>seeing errors. I?m currently dying in QT - I?ve seen these QCLUcene
>>errors before, but not on the platforms that I?m currently testing the
>>builds on ?. I believe that I get around
>> this by going into the qt build directory and running ?make install?
>>and the problem goes away.
>>
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneIndexSearcher::~QCLuceneIndexSearcher()'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneTermQuery::QCLuceneTermQuery(QCLuceneTerm const&)'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneIndexReader::deleteDocuments(QCLuceneTerm const&)'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to `QCLuceneIndexWriter::close()'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLucenePhraseQuery::addTerm(QCLuceneTerm const&)'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneTermQuery::~QCLuceneTermQuery()'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneQueryPrivate::~QCLuceneQueryPrivate()'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneStopAnalyzer::~QCLuceneStopAnalyzer()'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneBooleanQuery::add(QCLuceneQuery*, bool, bool, bool)'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneStandardAnalyzer::QCLuceneStandardAnalyzer()'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneIndexWriter::setMinMergeDocs(int)'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneStopAnalyzer::englishStopWords() const'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to `QCLuceneDocument::clear()'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to `QCLuceneTerm::QCLuceneTerm(QString
>>const&, QString const&)'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneIndexWriter::setMaxFieldLength(int)'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLucenePhraseQuery::QCLucenePhraseQuery()'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneStandardAnalyzer::~QCLuceneStandardAnalyzer()'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneIndexWriter::addDocument(QCLuceneDocument&, QCLuceneAnalyzer&)'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneSearcher::search(QCLuceneQuery const&)'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneDocument::QCLuceneDocument()'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to `QCLuceneQuery::toString() const'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneDocument::~QCLuceneDocument()'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to `QCLuceneIndexReader::open(QString
>>const&)'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneDocument::add(QCLuceneField*)'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to `QCLuceneIndexWriter::optimize()'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneField::QCLuceneField(QString const&, QString const&, int)'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneIndexReader::indexExists(QString const&)'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to `QCLuceneTerm::~QCLuceneTerm()'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneDocumentPrivate::~QCLuceneDocumentPrivate()'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to `QCLuceneHits::document(int)'
>>/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
>>ibQtHelp.so: undefined reference to
>>`QCLuceneIndexWriter::~QCLuceneIndexWriter()'____________________________
>>____
>>Rick Angelini
>>USArmy Research Laboratory
>>CISD/HPC Architectures Team
>>Phone: 410-278-6266
>>
>>
>>
>>From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil>
>>Date: Wednesday, January 21, 2015 at 11:36 AM
>>To: Utkarsh Ayachit <utkarsh.ayachit at kitware.com>, ParaView
>><paraview at paraview.org>, ParaView Developers
>><paraview-developers at paraview.org>
>>Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
>>
>>
>>>I?m having trouble building 4.3.1 on several systems where 4.2 built
>>>without issue. Is there a particular version of cmake that 4.3.1 needs
>>>to be built with?
>>>
>>>________________________________
>>>Rick Angelini
>>>USArmy Research Laboratory
>>>CISD/HPC Architectures Team
>>>Phone: 410-278-6266
>>>
>>>
>>>
>>>
>>>From: Utkarsh Ayachit <utkarsh.ayachit at kitware.com>
>>>Date: Tuesday, January 20, 2015 at 4:17 PM
>>>To: ParaView <paraview at paraview.org>, ParaView Developers
>>><paraview-developers at paraview.org>
>>>Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
>>>
>>>
>>>>Folks,
>>>>
>>>>ParaView 4.3.1 is now available for download. Checkout the release
>>>>notes on the Kitware blog [1].
>>>>
>>>>As always, we look forward to your feedback [2].
>>>>
>>>>Also stay tuned to the Kitware Blog [3] for upcoming features and
>>>>enhancements to ParaView, ParaView Catalyst, ParaViewWeb and much
>>>>more!
>>>>
>>>>- The ParaView team
>>>>
>>>>[1] http://www.kitware.com/blog/posts/view/825
>>>>[2] http://paraview.uservoice.com
>>>>[3] http://www.kitware.com/blog/
>>>>_______________________________________________
>>>>Powered by www.kitware.com
>>>>
>>>>Visit other Kitware open-source projects at
>>>>http://www.kitware.com/opensource/opensource.html
>>>><http://www.kitware.com/opensource/opensource.html>
>>>>
>>>>Please keep messages on-topic and check the ParaView Wiki at:
>>>>http://paraview.org/Wiki/ParaView <http://paraview.org/Wiki/ParaView>
>>>>
>>>>Search the list archives at:
>>>>http://markmail.org/search/?q=ParaView
>>>><http://markmail.org/search/?q=ParaView>
>>>>
>>>>Follow this link to subscribe/unsubscribe:
>>>>http://public.kitware.com/mailman/listinfo/paraview
From richard.c.angelini.civ at mail.mil Thu Jan 22 09:30:23 2015
From: richard.c.angelini.civ at mail.mil (Angelini, Richard C (Rick) CIV USARMY ARL (US))
Date: Thu, 22 Jan 2015 14:30:23 +0000
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
In-Reply-To: <D0E6674C.1FDD1%Richard.C.Angelini.CIV@mail.mil>
References: <CADHSJjA+pfqoJM5NbvCcTWXWiMEh4MqLiWdYSrHHZ8zEdYcmkw@mail.gmail.com>
<D0E53FA4.1FD72%Richard.C.Angelini.CIV@mail.mil>
<D0E54688.1FD81%Richard.C.Angelini.CIV@mail.mil>
<D0E65C8B.1FDBA%Richard.C.Angelini.CIV@mail.mil>
<D0E6674C.1FDD1%Richard.C.Angelini.CIV@mail.mil>
Message-ID: <D0E67380.1FDF0%Richard.C.Angelini.CIV@mail.mil>
Also ? mpiexec didn?t get pushed to the install directory.
It?s in the build directory but didn?t make it to install.
________________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>
Date: Thursday, January 22, 2015 at 8:44 AM
To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>, Utkarsh Ayachit <utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>, ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
I reran ?ccmake? in the paraview build directory and changed python to
point to the one in the Paraview build rather than the system python, and
I now have a clean build. So, there are a couple of issues:
QCLucene ? why does it fail and require a manual ?make install? to complete
Python ? why isnt? cmake picking up python from the build directory?
It seems to have ignored the CMAKE_INSTALL_PREFIX directive
As far as I know, these are ?new? issues. I?m building on a generic RHEL5
workstation for the first build. They get much more difficult on the HPC
systems.
cmake -DCMAKE_INSTALL_PREFIX:PATH=/home/angel/pv-test/${version} \
-Ddownload_location=`pwd`/../Downloads \
-DParaView_FROM_GIT=OFF \
-DParaView_URL=`pwd`/../Downloads/ParaView-v4.3.1-source.tar.gz \
-DCMAKE_BUILD_TYPE=Release \
-DENABLE_visitbridge:BOOL=ON \
-DENABLE_cgns=ON \
-DENABLE_boost=ON \
-DENABLE_ffmpeg=ON \
-DENABLE_hdf5=ON \
-DENABLE_matplotlib=ON \
-DENABLE_mesa=OFF \
-DENABLE_mpi=ON \
-DENABLE_numpy=ON \
-DENABLE_paraview=ON \
-DENABLE_python=ON \
-DENABLE_qt=ON \
-DENABLE_silo=ON \
-DENABLE_szip=ON \
-Dqt_DISABLE_WEBKIT=OFF \
-DUSE_SYSTEM_mpi=OFF ../Source
make -j 8 install
_
_______________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>
Date: Thursday, January 22, 2015 at 7:55 AM
To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>, Utkarsh Ayachit
<utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>, ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
FYI ? as I thought, manually running ?make install? allowed me to get
past the QCLucene errors as it has in the past. Looks like I then
made it all of the way through to the paraview before it died with some
python class errors. Looks like cmake
is picking up my system python instead of the one that I?m building as
part of the ParaView distro. That?s new. How do I get it to pick up
the Paraview/python not the system python?
________________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>
Date: Wednesday, January 21, 2015 at 12:08 PM
To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>, Utkarsh Ayachit
<utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>, ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>,
ParaView Developers <paraview-developers at paraview.org<mailto:paraview-developers at paraview.org>>
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
I was using cmake-2.8.11 and I upgraded to cmake-3.1.0, but I?m still
seeing errors. I?m currently dying in QT - I?ve seen these QCLUcene
errors before, but not on the platforms that I?m currently testing the
builds on ?. I believe that I get around
this by going into the qt build directory and running ?make install?
and the problem goes away.
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexSearcher::~QCLuceneIndexSearcher()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneTermQuery::QCLuceneTermQuery(QCLuceneTerm const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexReader::deleteDocuments(QCLuceneTerm const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneIndexWriter::close()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLucenePhraseQuery::addTerm(QCLuceneTerm const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneTermQuery::~QCLuceneTermQuery()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneQueryPrivate::~QCLuceneQueryPrivate()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneStopAnalyzer::~QCLuceneStopAnalyzer()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneBooleanQuery::add(QCLuceneQuery*, bool, bool, bool)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneStandardAnalyzer::QCLuceneStandardAnalyzer()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexWriter::setMinMergeDocs(int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneStopAnalyzer::englishStopWords() const'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneDocument::clear()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneTerm::QCLuceneTerm(QString
const&, QString const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexWriter::setMaxFieldLength(int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLucenePhraseQuery::QCLucenePhraseQuery()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneStandardAnalyzer::~QCLuceneStandardAnalyzer()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexWriter::addDocument(QCLuceneDocument&, QCLuceneAnalyzer&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneSearcher::search(QCLuceneQuery const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneDocument::QCLuceneDocument()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneQuery::toString() const'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneDocument::~QCLuceneDocument()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneIndexReader::open(QString
const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneDocument::add(QCLuceneField*)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneIndexWriter::optimize()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneField::QCLuceneField(QString const&, QString const&, int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexReader::indexExists(QString const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneTerm::~QCLuceneTerm()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneDocumentPrivate::~QCLuceneDocumentPrivate()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneHits::document(int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexWriter::~QCLuceneIndexWriter()'____________________________
____
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>
Date: Wednesday, January 21, 2015 at 11:36 AM
To: Utkarsh Ayachit <utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>, ParaView
<paraview at paraview.org<mailto:paraview at paraview.org>>, ParaView Developers
<paraview-developers at paraview.org<mailto:paraview-developers at paraview.org>>
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
I?m having trouble building 4.3.1 on several systems where 4.2 built
without issue. Is there a particular version of cmake that 4.3.1 needs
to be built with?
________________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: Utkarsh Ayachit <utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>
Date: Tuesday, January 20, 2015 at 4:17 PM
To: ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>, ParaView Developers
<paraview-developers at paraview.org<mailto:paraview-developers at paraview.org>>
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
Folks,
ParaView 4.3.1 is now available for download. Checkout the release
notes on the Kitware blog [1].
As always, we look forward to your feedback [2].
Also stay tuned to the Kitware Blog [3] for upcoming features and
enhancements to ParaView, ParaView Catalyst, ParaViewWeb and much
more!
- The ParaView team
[1] http://www.kitware.com/blog/posts/view/825
[2] http://paraview.uservoice.com
[3] http://www.kitware.com/blog/
_______________________________________________
Powered by www.kitware.com
Visit other Kitware open-source projects at
http://www.kitware.com/opensource/opensource.html
<http://www.kitware.com/opensource/opensource.html>
Please keep messages on-topic and check the ParaView Wiki at:
http://paraview.org/Wiki/ParaView <http://paraview.org/Wiki/ParaView>
Search the list archives at:
http://markmail.org/search/?q=ParaView
<http://markmail.org/search/?q=ParaView>
Follow this link to subscribe/unsubscribe:
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From utkarsh.ayachit at kitware.com Thu Jan 22 09:41:03 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Thu, 22 Jan 2015 09:41:03 -0500
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
In-Reply-To: <D0E67380.1FDF0%Richard.C.Angelini.CIV@mail.mil>
References: <CADHSJjA+pfqoJM5NbvCcTWXWiMEh4MqLiWdYSrHHZ8zEdYcmkw@mail.gmail.com>
<D0E53FA4.1FD72%Richard.C.Angelini.CIV@mail.mil>
<D0E54688.1FD81%Richard.C.Angelini.CIV@mail.mil>
<D0E65C8B.1FDBA%Richard.C.Angelini.CIV@mail.mil>
<D0E6674C.1FDD1%Richard.C.Angelini.CIV@mail.mil>
<D0E67380.1FDF0%Richard.C.Angelini.CIV@mail.mil>
Message-ID: <CADHSJjAew=Jjubdcq8dxi9J7VLeOyCTd1rTmMMd7b+Aqn6pSvw@mail.gmail.com>
Rich,
I'd definitely stick with v4.3.1 checkout of the Superbuild. There
have been changed pushed to git/master since the release that don't
yet build on even our dashboards, so there's work that needs to be
done.
i.e.
git clone git://paraview.org/ParaViewSuperbuild.git
git checkout v4.3.1
Even if that doesnt' solve the QCLucene problem. Since you said that
was present in the past too, I somehow must have missed that it.
That'd need separate tracking down. Let me know if the Python/MPI
problems persist with the v4.3.1 version of the Superbuild. The
git/master is certainly broken -- Chuck, I am assuming you're looking
into fix the git/master version.
Utkarsh
On Thu, Jan 22, 2015 at 9:30 AM, Angelini, Richard C (Rick) CIV USARMY
ARL (US) <richard.c.angelini.civ at mail.mil> wrote:
> Also ? mpiexec didn?t get pushed to the install directory.
> It?s in the build directory but didn?t make it to install.
>
>
> ________________________________
> Rick Angelini
> USArmy Research Laboratory
> CISD/HPC Architectures Team
> Phone: 410-278-6266
>
> From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil>
> Date: Thursday, January 22, 2015 at 8:44 AM
>
> To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil>, Utkarsh Ayachit
> <utkarsh.ayachit at kitware.com>, ParaView <paraview at paraview.org>
> Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
>
> I reran ?ccmake? in the paraview build directory and changed python to
> point to the one in the Paraview build rather than the system python, and
> I now have a clean build. So, there are a couple of issues:
>
> QCLucene ? why does it fail and require a manual ?make install? to complete
> Python ? why isnt? cmake picking up python from the build directory?
> It seems to have ignored the CMAKE_INSTALL_PREFIX directive
>
> As far as I know, these are ?new? issues. I?m building on a generic RHEL5
> workstation for the first build. They get much more difficult on the HPC
> systems.
>
>
> cmake -DCMAKE_INSTALL_PREFIX:PATH=/home/angel/pv-test/${version} \
> -Ddownload_location=`pwd`/../Downloads \
> -DParaView_FROM_GIT=OFF \
> -DParaView_URL=`pwd`/../Downloads/ParaView-v4.3.1-source.tar.gz \
> -DCMAKE_BUILD_TYPE=Release \
> -DENABLE_visitbridge:BOOL=ON \
> -DENABLE_cgns=ON \
> -DENABLE_boost=ON \
> -DENABLE_ffmpeg=ON \
> -DENABLE_hdf5=ON \
> -DENABLE_matplotlib=ON \
> -DENABLE_mesa=OFF \
> -DENABLE_mpi=ON \
> -DENABLE_numpy=ON \
> -DENABLE_paraview=ON \
> -DENABLE_python=ON \
> -DENABLE_qt=ON \
> -DENABLE_silo=ON \
> -DENABLE_szip=ON \
> -Dqt_DISABLE_WEBKIT=OFF \
> -DUSE_SYSTEM_mpi=OFF ../Source
>
> make -j 8 install
>
>
> _
> _______________________________
> Rick Angelini
> USArmy Research Laboratory
> CISD/HPC Architectures Team
> Phone: 410-278-6266
>
>
>
> From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil>
> Date: Thursday, January 22, 2015 at 7:55 AM
> To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil>, Utkarsh Ayachit
> <utkarsh.ayachit at kitware.com>, ParaView <paraview at paraview.org>
> Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
>
>
> FYI ? as I thought, manually running ?make install? allowed me to get
> past the QCLucene errors as it has in the past. Looks like I then
> made it all of the way through to the paraview before it died with some
> python class errors. Looks like cmake
> is picking up my system python instead of the one that I?m building as
> part of the ParaView distro. That?s new. How do I get it to pick up
> the Paraview/python not the system python?
>
>
>
> ________________________________
> Rick Angelini
> USArmy Research Laboratory
> CISD/HPC Architectures Team
> Phone: 410-278-6266
>
>
>
>
> From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil>
> Date: Wednesday, January 21, 2015 at 12:08 PM
> To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil>, Utkarsh Ayachit
> <utkarsh.ayachit at kitware.com>, ParaView <paraview at paraview.org>,
> ParaView Developers <paraview-developers at paraview.org>
> Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
>
>
> I was using cmake-2.8.11 and I upgraded to cmake-3.1.0, but I?m still
> seeing errors. I?m currently dying in QT - I?ve seen these QCLUcene
> errors before, but not on the platforms that I?m currently testing the
> builds on ?. I believe that I get around
> this by going into the qt build directory and running ?make install?
> and the problem goes away.
>
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneIndexSearcher::~QCLuceneIndexSearcher()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneTermQuery::QCLuceneTermQuery(QCLuceneTerm const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneIndexReader::deleteDocuments(QCLuceneTerm const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to `QCLuceneIndexWriter::close()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLucenePhraseQuery::addTerm(QCLuceneTerm const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneTermQuery::~QCLuceneTermQuery()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneQueryPrivate::~QCLuceneQueryPrivate()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneStopAnalyzer::~QCLuceneStopAnalyzer()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneBooleanQuery::add(QCLuceneQuery*, bool, bool, bool)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneStandardAnalyzer::QCLuceneStandardAnalyzer()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneIndexWriter::setMinMergeDocs(int)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneStopAnalyzer::englishStopWords() const'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to `QCLuceneDocument::clear()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to `QCLuceneTerm::QCLuceneTerm(QString
> const&, QString const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneIndexWriter::setMaxFieldLength(int)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLucenePhraseQuery::QCLucenePhraseQuery()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneStandardAnalyzer::~QCLuceneStandardAnalyzer()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneIndexWriter::addDocument(QCLuceneDocument&, QCLuceneAnalyzer&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneSearcher::search(QCLuceneQuery const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneDocument::QCLuceneDocument()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to `QCLuceneQuery::toString() const'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneDocument::~QCLuceneDocument()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to `QCLuceneIndexReader::open(QString
> const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneDocument::add(QCLuceneField*)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to `QCLuceneIndexWriter::optimize()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneField::QCLuceneField(QString const&, QString const&, int)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneIndexReader::indexExists(QString const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to `QCLuceneTerm::~QCLuceneTerm()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneDocumentPrivate::~QCLuceneDocumentPrivate()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to `QCLuceneHits::document(int)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneIndexWriter::~QCLuceneIndexWriter()'____________________________
> ____
> Rick Angelini
> USArmy Research Laboratory
> CISD/HPC Architectures Team
> Phone: 410-278-6266
>
>
>
> From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil>
> Date: Wednesday, January 21, 2015 at 11:36 AM
> To: Utkarsh Ayachit <utkarsh.ayachit at kitware.com>, ParaView
> <paraview at paraview.org>, ParaView Developers
> <paraview-developers at paraview.org>
> Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
>
>
> I?m having trouble building 4.3.1 on several systems where 4.2 built
> without issue. Is there a particular version of cmake that 4.3.1 needs
> to be built with?
>
> ________________________________
> Rick Angelini
> USArmy Research Laboratory
> CISD/HPC Architectures Team
> Phone: 410-278-6266
>
>
>
>
> From: Utkarsh Ayachit <utkarsh.ayachit at kitware.com>
> Date: Tuesday, January 20, 2015 at 4:17 PM
> To: ParaView <paraview at paraview.org>, ParaView Developers
> <paraview-developers at paraview.org>
> Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
>
>
> Folks,
>
> ParaView 4.3.1 is now available for download. Checkout the release
> notes on the Kitware blog [1].
>
> As always, we look forward to your feedback [2].
>
> Also stay tuned to the Kitware Blog [3] for upcoming features and
> enhancements to ParaView, ParaView Catalyst, ParaViewWeb and much
> more!
>
> - The ParaView team
>
> [1] http://www.kitware.com/blog/posts/view/825
> [2] http://paraview.uservoice.com
> [3] http://www.kitware.com/blog/
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
> <http://www.kitware.com/opensource/opensource.html>
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView <http://paraview.org/Wiki/ParaView>
>
> Search the list archives at:
> http://markmail.org/search/?q=ParaView
> <http://markmail.org/search/?q=ParaView>
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
>
From utkarsh.ayachit at kitware.com Thu Jan 22 09:43:27 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Thu, 22 Jan 2015 09:43:27 -0500
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
In-Reply-To: <54C0CBAC.6070502@onera.fr>
References: <54C0CBAC.6070502@onera.fr>
Message-ID: <CADHSJjDu_qkzUs6vqev8Ro+yUhx1BGFM5SSm4oBPFX0FvAWcLQ@mail.gmail.com>
Noted. We'll track it down. I've reported a bug:
http://www.paraview.org/Bug/view.php?id=15276
On Thu, Jan 22, 2015 at 5:06 AM, Richard Grenon <richard.grenon at onera.fr> wrote:
> Hello.
>
> I still have a problem with the "merge blocks" filter in Paraview 4.3.1 (see
> my attached picture) so I must stay on PV 4.1.0 if I want to use this
> filter.
>
> I found this problem first in PV 4.2.0.( see all messages in
> http://markmail.org/message/fvatgidqbvnufgi6 subject)
> It was said that this problem was related to the bug
> http://www.paraview.org/Bug/view.php?id=15022 that is now marked as fixed,
> but "merge blocks" still fails.
>
> I found also this problem in PV 4.3.0 RC1 ? Is the PV 4.3.1 version the same
> as PV 4.3.0 RC1 ?
>
> Regards.
>
> Richard
>
> --
> Richard GRENON
> ONERA
> Departement d'Aerodynamique Appliquee - DAAP/ACI
> 8 rue des Vertugadins
> 92190 MEUDON - FRANCE
> phone : +33 1 46 73 42 17
> fax : +33 1 46 73 41 46
> mailto:Richard.Grenon at onera.fr
> http://www.onera.fr
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
From haniehce at yahoo.com Thu Jan 22 10:45:39 2015
From: haniehce at yahoo.com (hanieh mirzaee)
Date: Thu, 22 Jan 2015 15:45:39 +0000 (UTC)
Subject: [Paraview] Mask values using the stl mesh file
Message-ID: <2094798470.5145860.1421941539667.JavaMail.yahoo@jws106120.mail.bf1.yahoo.com>
Dear all,
I would like to know, if there is a way in paraview to mask data arrays with a stl mesh file. For example, let's say we have a tube and? volumetric pressure values. However, the pressure data? extends outside of the tube. Is there a way to mask out those points?
Best,Hanieh
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From richard.c.angelini.civ at mail.mil Thu Jan 22 10:55:24 2015
From: richard.c.angelini.civ at mail.mil (Angelini, Richard C (Rick) CIV USARMY ARL (US))
Date: Thu, 22 Jan 2015 15:55:24 +0000
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
In-Reply-To: <CADHSJjAew=Jjubdcq8dxi9J7VLeOyCTd1rTmMMd7b+Aqn6pSvw@mail.gmail.com>
References: <CADHSJjA+pfqoJM5NbvCcTWXWiMEh4MqLiWdYSrHHZ8zEdYcmkw@mail.gmail.com>
<D0E53FA4.1FD72%Richard.C.Angelini.CIV@mail.mil>
<D0E54688.1FD81%Richard.C.Angelini.CIV@mail.mil>
<D0E65C8B.1FDBA%Richard.C.Angelini.CIV@mail.mil>
<D0E6674C.1FDD1%Richard.C.Angelini.CIV@mail.mil>
<D0E67380.1FDF0%Richard.C.Angelini.CIV@mail.mil>
<CADHSJjAew=Jjubdcq8dxi9J7VLeOyCTd1rTmMMd7b+Aqn6pSvw@mail.gmail.com>
Message-ID: <D0E6876B.1FE04%Richard.C.Angelini.CIV@mail.mil>
The python and mpi issues both exist with the v4.3.1 of the superbuild ? assuming I?m pulling things in correctly.
________________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: Utkarsh Ayachit <utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>
Date: Thursday, January 22, 2015 at 9:41 AM
To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>, Chuck Atkins <chuck.atkins at kitware.com<mailto:chuck.atkins at kitware.com>>
Cc: ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
Rich,
I'd definitely stick with v4.3.1 checkout of the Superbuild. There
have been changed pushed to git/master since the release that don't
yet build on even our dashboards, so there's work that needs to be
done.
i.e.
git clone git://paraview.org/ParaViewSuperbuild.git
git checkout v4.3.1
Even if that doesnt' solve the QCLucene problem. Since you said that
was present in the past too, I somehow must have missed that it.
That'd need separate tracking down. Let me know if the Python/MPI
problems persist with the v4.3.1 version of the Superbuild. The
git/master is certainly broken -- Chuck, I am assuming you're looking
into fix the git/master version.
Utkarsh
On Thu, Jan 22, 2015 at 9:30 AM, Angelini, Richard C (Rick) CIV USARMY
ARL (US) <richard.c.angelini.civ at mail.mil<mailto:richard.c.angelini.civ at mail.mil>> wrote:
Also ? mpiexec didn?t get pushed to the install directory.
It?s in the build directory but didn?t make it to install.
________________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>
Date: Thursday, January 22, 2015 at 8:44 AM
To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>, Utkarsh Ayachit
<utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>, ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
I reran ?ccmake? in the paraview build directory and changed python to
point to the one in the Paraview build rather than the system python, and
I now have a clean build. So, there are a couple of issues:
QCLucene ? why does it fail and require a manual ?make install? to complete
Python ? why isnt? cmake picking up python from the build directory?
It seems to have ignored the CMAKE_INSTALL_PREFIX directive
As far as I know, these are ?new? issues. I?m building on a generic RHEL5
workstation for the first build. They get much more difficult on the HPC
systems.
cmake -DCMAKE_INSTALL_PREFIX:PATH=/home/angel/pv-test/${version} \
-Ddownload_location=`pwd`/../Downloads \
-DParaView_FROM_GIT=OFF \
-DParaView_URL=`pwd`/../Downloads/ParaView-v4.3.1-source.tar.gz \
-DCMAKE_BUILD_TYPE=Release \
-DENABLE_visitbridge:BOOL=ON \
-DENABLE_cgns=ON \
-DENABLE_boost=ON \
-DENABLE_ffmpeg=ON \
-DENABLE_hdf5=ON \
-DENABLE_matplotlib=ON \
-DENABLE_mesa=OFF \
-DENABLE_mpi=ON \
-DENABLE_numpy=ON \
-DENABLE_paraview=ON \
-DENABLE_python=ON \
-DENABLE_qt=ON \
-DENABLE_silo=ON \
-DENABLE_szip=ON \
-Dqt_DISABLE_WEBKIT=OFF \
-DUSE_SYSTEM_mpi=OFF ../Source
make -j 8 install
_
_______________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>
Date: Thursday, January 22, 2015 at 7:55 AM
To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>, Utkarsh Ayachit
<utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>, ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
FYI ? as I thought, manually running ?make install? allowed me to get
past the QCLucene errors as it has in the past. Looks like I then
made it all of the way through to the paraview before it died with some
python class errors. Looks like cmake
is picking up my system python instead of the one that I?m building as
part of the ParaView distro. That?s new. How do I get it to pick up
the Paraview/python not the system python?
________________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>
Date: Wednesday, January 21, 2015 at 12:08 PM
To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>, Utkarsh Ayachit
<utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>, ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>,
ParaView Developers <paraview-developers at paraview.org<mailto:paraview-developers at paraview.org>>
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
I was using cmake-2.8.11 and I upgraded to cmake-3.1.0, but I?m still
seeing errors. I?m currently dying in QT - I?ve seen these QCLUcene
errors before, but not on the platforms that I?m currently testing the
builds on ?. I believe that I get around
this by going into the qt build directory and running ?make install?
and the problem goes away.
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexSearcher::~QCLuceneIndexSearcher()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneTermQuery::QCLuceneTermQuery(QCLuceneTerm const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexReader::deleteDocuments(QCLuceneTerm const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneIndexWriter::close()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLucenePhraseQuery::addTerm(QCLuceneTerm const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneTermQuery::~QCLuceneTermQuery()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneQueryPrivate::~QCLuceneQueryPrivate()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneStopAnalyzer::~QCLuceneStopAnalyzer()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneBooleanQuery::add(QCLuceneQuery*, bool, bool, bool)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneStandardAnalyzer::QCLuceneStandardAnalyzer()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexWriter::setMinMergeDocs(int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneStopAnalyzer::englishStopWords() const'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneDocument::clear()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneTerm::QCLuceneTerm(QString
const&, QString const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexWriter::setMaxFieldLength(int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLucenePhraseQuery::QCLucenePhraseQuery()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneStandardAnalyzer::~QCLuceneStandardAnalyzer()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexWriter::addDocument(QCLuceneDocument&, QCLuceneAnalyzer&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneSearcher::search(QCLuceneQuery const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneDocument::QCLuceneDocument()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneQuery::toString() const'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneDocument::~QCLuceneDocument()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneIndexReader::open(QString
const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneDocument::add(QCLuceneField*)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneIndexWriter::optimize()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneField::QCLuceneField(QString const&, QString const&, int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexReader::indexExists(QString const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneTerm::~QCLuceneTerm()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneDocumentPrivate::~QCLuceneDocumentPrivate()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneHits::document(int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexWriter::~QCLuceneIndexWriter()'____________________________
____
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>
Date: Wednesday, January 21, 2015 at 11:36 AM
To: Utkarsh Ayachit <utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>, ParaView
<paraview at paraview.org<mailto:paraview at paraview.org>>, ParaView Developers
<paraview-developers at paraview.org<mailto:paraview-developers at paraview.org>>
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
I?m having trouble building 4.3.1 on several systems where 4.2 built
without issue. Is there a particular version of cmake that 4.3.1 needs
to be built with?
________________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: Utkarsh Ayachit <utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>
Date: Tuesday, January 20, 2015 at 4:17 PM
To: ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>, ParaView Developers
<paraview-developers at paraview.org<mailto:paraview-developers at paraview.org>>
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
Folks,
ParaView 4.3.1 is now available for download. Checkout the release
notes on the Kitware blog [1].
As always, we look forward to your feedback [2].
Also stay tuned to the Kitware Blog [3] for upcoming features and
enhancements to ParaView, ParaView Catalyst, ParaViewWeb and much
more!
- The ParaView team
[1] http://www.kitware.com/blog/posts/view/825
[2] http://paraview.uservoice.com
[3] http://www.kitware.com/blog/
_______________________________________________
Powered by www.kitware.com
Visit other Kitware open-source projects at
http://www.kitware.com/opensource/opensource.html
<http://www.kitware.com/opensource/opensource.html>
Please keep messages on-topic and check the ParaView Wiki at:
http://paraview.org/Wiki/ParaView <http://paraview.org/Wiki/ParaView>
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From utkarsh.ayachit at kitware.com Thu Jan 22 10:57:32 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Thu, 22 Jan 2015 10:57:32 -0500
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
In-Reply-To: <D0E6876B.1FE04%Richard.C.Angelini.CIV@mail.mil>
References: <CADHSJjA+pfqoJM5NbvCcTWXWiMEh4MqLiWdYSrHHZ8zEdYcmkw@mail.gmail.com>
<D0E53FA4.1FD72%Richard.C.Angelini.CIV@mail.mil>
<D0E54688.1FD81%Richard.C.Angelini.CIV@mail.mil>
<D0E65C8B.1FDBA%Richard.C.Angelini.CIV@mail.mil>
<D0E6674C.1FDD1%Richard.C.Angelini.CIV@mail.mil>
<D0E67380.1FDF0%Richard.C.Angelini.CIV@mail.mil>
<CADHSJjAew=Jjubdcq8dxi9J7VLeOyCTd1rTmMMd7b+Aqn6pSvw@mail.gmail.com>
<D0E6876B.1FE04%Richard.C.Angelini.CIV@mail.mil>
Message-ID: <CADHSJjAa533vC5SV=TMT7gBfcftQtUdwXnwjJrnx4Y8rNC05UQ@mail.gmail.com>
Ben,
Can you follow up with Rick please? These may be related to the
changes you made to Python in the superbuilds.
Utkarsh
On Thu, Jan 22, 2015 at 10:55 AM, Angelini, Richard C (Rick) CIV
USARMY ARL (US) <richard.c.angelini.civ at mail.mil> wrote:
> The python and mpi issues both exist with the v4.3.1 of the superbuild ?
> assuming I?m pulling things in correctly.
>
>
>
> ________________________________
> Rick Angelini
> USArmy Research Laboratory
> CISD/HPC Architectures Team
> Phone: 410-278-6266
>
> From: Utkarsh Ayachit <utkarsh.ayachit at kitware.com>
> Date: Thursday, January 22, 2015 at 9:41 AM
> To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil>, Chuck Atkins
> <chuck.atkins at kitware.com>
> Cc: ParaView <paraview at paraview.org>
>
> Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
>
> Rich,
>
> I'd definitely stick with v4.3.1 checkout of the Superbuild. There
> have been changed pushed to git/master since the release that don't
> yet build on even our dashboards, so there's work that needs to be
> done.
>
> i.e.
> git clone git://paraview.org/ParaViewSuperbuild.git
> git checkout v4.3.1
>
> Even if that doesnt' solve the QCLucene problem. Since you said that
> was present in the past too, I somehow must have missed that it.
> That'd need separate tracking down. Let me know if the Python/MPI
> problems persist with the v4.3.1 version of the Superbuild. The
> git/master is certainly broken -- Chuck, I am assuming you're looking
> into fix the git/master version.
>
> Utkarsh
>
> On Thu, Jan 22, 2015 at 9:30 AM, Angelini, Richard C (Rick) CIV USARMY
> ARL (US) <richard.c.angelini.civ at mail.mil> wrote:
>
> Also ? mpiexec didn?t get pushed to the install directory.
> It?s in the build directory but didn?t make it to install.
>
>
> ________________________________
> Rick Angelini
> USArmy Research Laboratory
> CISD/HPC Architectures Team
> Phone: 410-278-6266
>
> From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil>
> Date: Thursday, January 22, 2015 at 8:44 AM
>
> To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil>, Utkarsh Ayachit
> <utkarsh.ayachit at kitware.com>, ParaView <paraview at paraview.org>
> Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
>
> I reran ?ccmake? in the paraview build directory and changed python to
> point to the one in the Paraview build rather than the system python, and
> I now have a clean build. So, there are a couple of issues:
>
> QCLucene ? why does it fail and require a manual ?make install? to complete
> Python ? why isnt? cmake picking up python from the build directory?
> It seems to have ignored the CMAKE_INSTALL_PREFIX directive
>
> As far as I know, these are ?new? issues. I?m building on a generic RHEL5
> workstation for the first build. They get much more difficult on the HPC
> systems.
>
>
> cmake -DCMAKE_INSTALL_PREFIX:PATH=/home/angel/pv-test/${version} \
> -Ddownload_location=`pwd`/../Downloads \
> -DParaView_FROM_GIT=OFF \
> -DParaView_URL=`pwd`/../Downloads/ParaView-v4.3.1-source.tar.gz \
> -DCMAKE_BUILD_TYPE=Release \
> -DENABLE_visitbridge:BOOL=ON \
> -DENABLE_cgns=ON \
> -DENABLE_boost=ON \
> -DENABLE_ffmpeg=ON \
> -DENABLE_hdf5=ON \
> -DENABLE_matplotlib=ON \
> -DENABLE_mesa=OFF \
> -DENABLE_mpi=ON \
> -DENABLE_numpy=ON \
> -DENABLE_paraview=ON \
> -DENABLE_python=ON \
> -DENABLE_qt=ON \
> -DENABLE_silo=ON \
> -DENABLE_szip=ON \
> -Dqt_DISABLE_WEBKIT=OFF \
> -DUSE_SYSTEM_mpi=OFF ../Source
>
> make -j 8 install
>
>
> _
> _______________________________
> Rick Angelini
> USArmy Research Laboratory
> CISD/HPC Architectures Team
> Phone: 410-278-6266
>
>
>
> From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil>
> Date: Thursday, January 22, 2015 at 7:55 AM
> To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil>, Utkarsh Ayachit
> <utkarsh.ayachit at kitware.com>, ParaView <paraview at paraview.org>
> Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
>
>
> FYI ? as I thought, manually running ?make install? allowed me to get
> past the QCLucene errors as it has in the past. Looks like I then
> made it all of the way through to the paraview before it died with some
> python class errors. Looks like cmake
> is picking up my system python instead of the one that I?m building as
> part of the ParaView distro. That?s new. How do I get it to pick up
> the Paraview/python not the system python?
>
>
>
> ________________________________
> Rick Angelini
> USArmy Research Laboratory
> CISD/HPC Architectures Team
> Phone: 410-278-6266
>
>
>
>
> From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil>
> Date: Wednesday, January 21, 2015 at 12:08 PM
> To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil>, Utkarsh Ayachit
> <utkarsh.ayachit at kitware.com>, ParaView <paraview at paraview.org>,
> ParaView Developers <paraview-developers at paraview.org>
> Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
>
>
> I was using cmake-2.8.11 and I upgraded to cmake-3.1.0, but I?m still
> seeing errors. I?m currently dying in QT - I?ve seen these QCLUcene
> errors before, but not on the platforms that I?m currently testing the
> builds on ?. I believe that I get around
> this by going into the qt build directory and running ?make install?
> and the problem goes away.
>
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneIndexSearcher::~QCLuceneIndexSearcher()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneTermQuery::QCLuceneTermQuery(QCLuceneTerm const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneIndexReader::deleteDocuments(QCLuceneTerm const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to `QCLuceneIndexWriter::close()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLucenePhraseQuery::addTerm(QCLuceneTerm const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneTermQuery::~QCLuceneTermQuery()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneQueryPrivate::~QCLuceneQueryPrivate()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneStopAnalyzer::~QCLuceneStopAnalyzer()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneBooleanQuery::add(QCLuceneQuery*, bool, bool, bool)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneStandardAnalyzer::QCLuceneStandardAnalyzer()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneIndexWriter::setMinMergeDocs(int)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneStopAnalyzer::englishStopWords() const'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to `QCLuceneDocument::clear()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to `QCLuceneTerm::QCLuceneTerm(QString
> const&, QString const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneIndexWriter::setMaxFieldLength(int)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLucenePhraseQuery::QCLucenePhraseQuery()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneStandardAnalyzer::~QCLuceneStandardAnalyzer()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneIndexWriter::addDocument(QCLuceneDocument&, QCLuceneAnalyzer&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneSearcher::search(QCLuceneQuery const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneDocument::QCLuceneDocument()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to `QCLuceneQuery::toString() const'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneDocument::~QCLuceneDocument()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to `QCLuceneIndexReader::open(QString
> const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneDocument::add(QCLuceneField*)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to `QCLuceneIndexWriter::optimize()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneField::QCLuceneField(QString const&, QString const&, int)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneIndexReader::indexExists(QString const&)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to `QCLuceneTerm::~QCLuceneTerm()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneDocumentPrivate::~QCLuceneDocumentPrivate()'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to `QCLuceneHits::document(int)'
> /home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
> ibQtHelp.so: undefined reference to
> `QCLuceneIndexWriter::~QCLuceneIndexWriter()'____________________________
> ____
> Rick Angelini
> USArmy Research Laboratory
> CISD/HPC Architectures Team
> Phone: 410-278-6266
>
>
>
> From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil>
> Date: Wednesday, January 21, 2015 at 11:36 AM
> To: Utkarsh Ayachit <utkarsh.ayachit at kitware.com>, ParaView
> <paraview at paraview.org>, ParaView Developers
> <paraview-developers at paraview.org>
> Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
>
>
> I?m having trouble building 4.3.1 on several systems where 4.2 built
> without issue. Is there a particular version of cmake that 4.3.1 needs
> to be built with?
>
> ________________________________
> Rick Angelini
> USArmy Research Laboratory
> CISD/HPC Architectures Team
> Phone: 410-278-6266
>
>
>
>
> From: Utkarsh Ayachit <utkarsh.ayachit at kitware.com>
> Date: Tuesday, January 20, 2015 at 4:17 PM
> To: ParaView <paraview at paraview.org>, ParaView Developers
> <paraview-developers at paraview.org>
> Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
>
>
> Folks,
>
> ParaView 4.3.1 is now available for download. Checkout the release
> notes on the Kitware blog [1].
>
> As always, we look forward to your feedback [2].
>
> Also stay tuned to the Kitware Blog [3] for upcoming features and
> enhancements to ParaView, ParaView Catalyst, ParaViewWeb and much
> more!
>
> - The ParaView team
>
> [1] http://www.kitware.com/blog/posts/view/825
> [2] http://paraview.uservoice.com
> [3] http://www.kitware.com/blog/
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
> <http://www.kitware.com/opensource/opensource.html>
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView <http://paraview.org/Wiki/ParaView>
>
> Search the list archives at:
> http://markmail.org/search/?q=ParaView
> <http://markmail.org/search/?q=ParaView>
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
>
>
From richard.c.angelini.civ at mail.mil Thu Jan 22 10:59:08 2015
From: richard.c.angelini.civ at mail.mil (Angelini, Richard C (Rick) CIV USARMY ARL (US))
Date: Thu, 22 Jan 2015 15:59:08 +0000
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
In-Reply-To: <CADHSJjAew=Jjubdcq8dxi9J7VLeOyCTd1rTmMMd7b+Aqn6pSvw@mail.gmail.com>
References: <CADHSJjA+pfqoJM5NbvCcTWXWiMEh4MqLiWdYSrHHZ8zEdYcmkw@mail.gmail.com>
<D0E53FA4.1FD72%Richard.C.Angelini.CIV@mail.mil>
<D0E54688.1FD81%Richard.C.Angelini.CIV@mail.mil>
<D0E65C8B.1FDBA%Richard.C.Angelini.CIV@mail.mil>
<D0E6674C.1FDD1%Richard.C.Angelini.CIV@mail.mil>
<D0E67380.1FDF0%Richard.C.Angelini.CIV@mail.mil>
<CADHSJjAew=Jjubdcq8dxi9J7VLeOyCTd1rTmMMd7b+Aqn6pSvw@mail.gmail.com>
Message-ID: <D0E687EC.1FE06%Richard.C.Angelini.CIV@mail.mil>
I?ve seen the QCLucene issue on isolated (SGI machines?) in the past. I seem to now be seeing on every machine I?m trying to build on ?.
________________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: Utkarsh Ayachit <utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>
Date: Thursday, January 22, 2015 at 9:41 AM
To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>, Chuck Atkins <chuck.atkins at kitware.com<mailto:chuck.atkins at kitware.com>>
Cc: ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
Rich,
I'd definitely stick with v4.3.1 checkout of the Superbuild. There
have been changed pushed to git/master since the release that don't
yet build on even our dashboards, so there's work that needs to be
done.
i.e.
git clone git://paraview.org/ParaViewSuperbuild.git
git checkout v4.3.1
Even if that doesnt' solve the QCLucene problem. Since you said that
was present in the past too, I somehow must have missed that it.
That'd need separate tracking down. Let me know if the Python/MPI
problems persist with the v4.3.1 version of the Superbuild. The
git/master is certainly broken -- Chuck, I am assuming you're looking
into fix the git/master version.
Utkarsh
On Thu, Jan 22, 2015 at 9:30 AM, Angelini, Richard C (Rick) CIV USARMY
ARL (US) <richard.c.angelini.civ at mail.mil<mailto:richard.c.angelini.civ at mail.mil>> wrote:
Also ? mpiexec didn?t get pushed to the install directory.
It?s in the build directory but didn?t make it to install.
________________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>
Date: Thursday, January 22, 2015 at 8:44 AM
To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>, Utkarsh Ayachit
<utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>, ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
I reran ?ccmake? in the paraview build directory and changed python to
point to the one in the Paraview build rather than the system python, and
I now have a clean build. So, there are a couple of issues:
QCLucene ? why does it fail and require a manual ?make install? to complete
Python ? why isnt? cmake picking up python from the build directory?
It seems to have ignored the CMAKE_INSTALL_PREFIX directive
As far as I know, these are ?new? issues. I?m building on a generic RHEL5
workstation for the first build. They get much more difficult on the HPC
systems.
cmake -DCMAKE_INSTALL_PREFIX:PATH=/home/angel/pv-test/${version} \
-Ddownload_location=`pwd`/../Downloads \
-DParaView_FROM_GIT=OFF \
-DParaView_URL=`pwd`/../Downloads/ParaView-v4.3.1-source.tar.gz \
-DCMAKE_BUILD_TYPE=Release \
-DENABLE_visitbridge:BOOL=ON \
-DENABLE_cgns=ON \
-DENABLE_boost=ON \
-DENABLE_ffmpeg=ON \
-DENABLE_hdf5=ON \
-DENABLE_matplotlib=ON \
-DENABLE_mesa=OFF \
-DENABLE_mpi=ON \
-DENABLE_numpy=ON \
-DENABLE_paraview=ON \
-DENABLE_python=ON \
-DENABLE_qt=ON \
-DENABLE_silo=ON \
-DENABLE_szip=ON \
-Dqt_DISABLE_WEBKIT=OFF \
-DUSE_SYSTEM_mpi=OFF ../Source
make -j 8 install
_
_______________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>
Date: Thursday, January 22, 2015 at 7:55 AM
To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>, Utkarsh Ayachit
<utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>, ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
FYI ? as I thought, manually running ?make install? allowed me to get
past the QCLucene errors as it has in the past. Looks like I then
made it all of the way through to the paraview before it died with some
python class errors. Looks like cmake
is picking up my system python instead of the one that I?m building as
part of the ParaView distro. That?s new. How do I get it to pick up
the Paraview/python not the system python?
________________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>
Date: Wednesday, January 21, 2015 at 12:08 PM
To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>, Utkarsh Ayachit
<utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>, ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>,
ParaView Developers <paraview-developers at paraview.org<mailto:paraview-developers at paraview.org>>
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
I was using cmake-2.8.11 and I upgraded to cmake-3.1.0, but I?m still
seeing errors. I?m currently dying in QT - I?ve seen these QCLUcene
errors before, but not on the platforms that I?m currently testing the
builds on ?. I believe that I get around
this by going into the qt build directory and running ?make install?
and the problem goes away.
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexSearcher::~QCLuceneIndexSearcher()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneTermQuery::QCLuceneTermQuery(QCLuceneTerm const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexReader::deleteDocuments(QCLuceneTerm const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneIndexWriter::close()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLucenePhraseQuery::addTerm(QCLuceneTerm const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneTermQuery::~QCLuceneTermQuery()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneQueryPrivate::~QCLuceneQueryPrivate()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneStopAnalyzer::~QCLuceneStopAnalyzer()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneBooleanQuery::add(QCLuceneQuery*, bool, bool, bool)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneStandardAnalyzer::QCLuceneStandardAnalyzer()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexWriter::setMinMergeDocs(int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneStopAnalyzer::englishStopWords() const'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneDocument::clear()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneTerm::QCLuceneTerm(QString
const&, QString const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexWriter::setMaxFieldLength(int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLucenePhraseQuery::QCLucenePhraseQuery()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneStandardAnalyzer::~QCLuceneStandardAnalyzer()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexWriter::addDocument(QCLuceneDocument&, QCLuceneAnalyzer&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneSearcher::search(QCLuceneQuery const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneDocument::QCLuceneDocument()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneQuery::toString() const'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneDocument::~QCLuceneDocument()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneIndexReader::open(QString
const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneDocument::add(QCLuceneField*)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneIndexWriter::optimize()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneField::QCLuceneField(QString const&, QString const&, int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexReader::indexExists(QString const&)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneTerm::~QCLuceneTerm()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneDocumentPrivate::~QCLuceneDocumentPrivate()'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to `QCLuceneHits::document(int)'
/home/angel/PV/ParaViewSuperbuild/4.3.1/Build_4.3.1/qt/src/qt-build/lib/l
ibQtHelp.so: undefined reference to
`QCLuceneIndexWriter::~QCLuceneIndexWriter()'____________________________
____
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: <Angelini>, Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>
Date: Wednesday, January 21, 2015 at 11:36 AM
To: Utkarsh Ayachit <utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>, ParaView
<paraview at paraview.org<mailto:paraview at paraview.org>>, ParaView Developers
<paraview-developers at paraview.org<mailto:paraview-developers at paraview.org>>
Subject: Re: [Paraview] ANN: ParaView 4.3.1 is available for download
I?m having trouble building 4.3.1 on several systems where 4.2 built
without issue. Is there a particular version of cmake that 4.3.1 needs
to be built with?
________________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone: 410-278-6266
From: Utkarsh Ayachit <utkarsh.ayachit at kitware.com<mailto:utkarsh.ayachit at kitware.com>>
Date: Tuesday, January 20, 2015 at 4:17 PM
To: ParaView <paraview at paraview.org<mailto:paraview at paraview.org>>, ParaView Developers
<paraview-developers at paraview.org<mailto:paraview-developers at paraview.org>>
Subject: [Paraview] ANN: ParaView 4.3.1 is available for download
Folks,
ParaView 4.3.1 is now available for download. Checkout the release
notes on the Kitware blog [1].
As always, we look forward to your feedback [2].
Also stay tuned to the Kitware Blog [3] for upcoming features and
enhancements to ParaView, ParaView Catalyst, ParaViewWeb and much
more!
- The ParaView team
[1] http://www.kitware.com/blog/posts/view/825
[2] http://paraview.uservoice.com
[3] http://www.kitware.com/blog/
_______________________________________________
Powered by www.kitware.com
Visit other Kitware open-source projects at
http://www.kitware.com/opensource/opensource.html
<http://www.kitware.com/opensource/opensource.html>
Please keep messages on-topic and check the ParaView Wiki at:
http://paraview.org/Wiki/ParaView <http://paraview.org/Wiki/ParaView>
Search the list archives at:
http://markmail.org/search/?q=ParaView
<http://markmail.org/search/?q=ParaView>
Follow this link to subscribe/unsubscribe:
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From bruce.david.jones at gmail.com Thu Jan 22 11:17:13 2015
From: bruce.david.jones at gmail.com (Bruce Jones)
Date: Thu, 22 Jan 2015 16:17:13 +0000
Subject: [Paraview] Visualising image data
Message-ID: <CAEc4V-aeRc08XymsKfNUwM75-wsd+e=tGsc_bMjqs+K9RY4sxw@mail.gmail.com>
Hi all,
I'm working on a programmable filter that needs to produce a vtkImageData
object. So far it appears to work, inspection of the properties panel shows
the object has the correct number of points/cells and the data array
contains the correct data. However I cannot get a visualisation with any of
the representations (surface, outline, wireframe etc). Curiously, if i set
the display to my data array then the color bar appears with the correct
values, but still not visualization.
I am using the following code to produce the image data object.
from vtk import *
output = self.GetOutputDataObject(0);
# Create a VTK Grid
grid = vtkImageData()
grid.SetOrigin(0, 0, 0) # default values
dx=10;
grid.SetSpacing(dx, dx, dx)
grid.SetDimensions(5, 8, 10) # number of points in each direction
# print grid.GetNumberOfPoints()
# print grid.GetNumberOfCells()
array = vtkDoubleArray()
array.SetNumberOfComponents(1) # this is 3 for a vector
array.SetNumberOfTuples(grid.GetNumberOfPoints())
for i in range(grid.GetNumberOfPoints()):
if i < 200:
array.SetValue(i, 1)
else:
array.SetValue(i, 2)
grid.GetPointData().AddArray(array)
# print grid.GetPointData().GetNumberOfArrays()
array.SetName("unit array")
output.ShallowCopy(grid);
Cheers,
Bruce
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From dave.demarle at kitware.com Thu Jan 22 11:45:36 2015
From: dave.demarle at kitware.com (David E DeMarle)
Date: Thu, 22 Jan 2015 11:45:36 -0500
Subject: [Paraview] Visualising image data
In-Reply-To: <CAEc4V-aeRc08XymsKfNUwM75-wsd+e=tGsc_bMjqs+K9RY4sxw@mail.gmail.com>
References: <CAEc4V-aeRc08XymsKfNUwM75-wsd+e=tGsc_bMjqs+K9RY4sxw@mail.gmail.com>
Message-ID: <CANjZAi-B9nORZDjRgUkWYOyzibScPrWW-KFk=7Y=bQO_ioE+rg@mail.gmail.com>
Announce the whole extent in the RequestInformation script section.
That should do the trick.
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909
On Thu, Jan 22, 2015 at 11:17 AM, Bruce Jones <bruce.david.jones at gmail.com>
wrote:
> Hi all,
>
> I'm working on a programmable filter that needs to produce a vtkImageData
> object. So far it appears to work, inspection of the properties panel shows
> the object has the correct number of points/cells and the data array
> contains the correct data. However I cannot get a visualisation with any of
> the representations (surface, outline, wireframe etc). Curiously, if i set
> the display to my data array then the color bar appears with the correct
> values, but still not visualization.
>
> I am using the following code to produce the image data object.
>
> from vtk import *
>
> output = self.GetOutputDataObject(0);
>
> # Create a VTK Grid
> grid = vtkImageData()
> grid.SetOrigin(0, 0, 0) # default values
> dx=10;
> grid.SetSpacing(dx, dx, dx)
> grid.SetDimensions(5, 8, 10) # number of points in each direction
> # print grid.GetNumberOfPoints()
> # print grid.GetNumberOfCells()
> array = vtkDoubleArray()
> array.SetNumberOfComponents(1) # this is 3 for a vector
> array.SetNumberOfTuples(grid.GetNumberOfPoints())
> for i in range(grid.GetNumberOfPoints()):
> if i < 200:
> array.SetValue(i, 1)
> else:
> array.SetValue(i, 2)
>
> grid.GetPointData().AddArray(array)
> # print grid.GetPointData().GetNumberOfArrays()
> array.SetName("unit array")
> output.ShallowCopy(grid);
>
> Cheers,
> Bruce
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From belanma at mcmaster.ca Thu Jan 22 11:50:03 2015
From: belanma at mcmaster.ca (Mark Belan)
Date: Thu, 22 Jan 2015 11:50:03 -0500
Subject: [Paraview] Plotting data to an existing model's surface
Message-ID: <CAFw8VoR=PX2pEkq1D3T99brpzOjQ4WQ9+wLXAbG3rPQRNic1yA@mail.gmail.com>
Hello all,
I'm a graduate student in geology trying to do some visual data work, but
I'm afraid my inexperience with paraview is making things a bit difficult
for me.
Essentially what I'm trying to create is a 3D model of a rock that has its
surface coloured to show spatial distribution of a physical property
associated with certain areas on the rock.
I was able to reproduce the rock I sample from using a 3D scanner but I
have no idea how to go about selecting particular areas of the rock's
surface, assigning a value to that "area", and having the program
interpolate between multiple "areas". Essentially I'd like this to produce
a color gradient showcasing the changing values.
Can anyone offer some guidance/direction? I had someone at my campus
suggest creating a .csv file with x,y,z coordinates of the particular areas
of the model of interest, but after doing that all I've produced are
"points"...not sure how to specify the association to the model and color
and interpolation, etc.
Thanks for any help,
- Mark
--
*Mark Belan*, B. Art Sc.
*M. Sc. Candidate - Astrobiology*
*Lewis and Ruth Sherman Graduate Fellow*
McMaster University
School of Geography and Earth Sciences
GSB 323
1280 Main Street West
Hamilton, Ontario
Canada
L8S 4L8
*Art*: www.markbelan.com
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From bruce.david.jones at gmail.com Thu Jan 22 11:51:07 2015
From: bruce.david.jones at gmail.com (Bruce Jones)
Date: Thu, 22 Jan 2015 16:51:07 +0000
Subject: [Paraview] Visualising image data
References: <CAEc4V-aeRc08XymsKfNUwM75-wsd+e=tGsc_bMjqs+K9RY4sxw@mail.gmail.com>
<CANjZAi-B9nORZDjRgUkWYOyzibScPrWW-KFk=7Y=bQO_ioE+rg@mail.gmail.com>
Message-ID: <CAEc4V-YqXk2yAp__6dNrHwMGZPFgRkS+=Y0uqsKuBFG2siSGEQ@mail.gmail.com>
Thanks for the response David. Could you elaborate on this? I am not sure
how to do what you are suggesting.
Cheers,
Bruce
On Thu Jan 22 2015 at 11:46:02 AM David E DeMarle <dave.demarle at kitware.com>
wrote:
> Announce the whole extent in the RequestInformation script section.
> That should do the trick.
>
>
>
> David E DeMarle
> Kitware, Inc.
> R&D Engineer
> 21 Corporate Drive
> Clifton Park, NY 12065-8662
> Phone: 518-881-4909
>
> On Thu, Jan 22, 2015 at 11:17 AM, Bruce Jones <bruce.david.jones at gmail.com
> > wrote:
>
>> Hi all,
>>
>> I'm working on a programmable filter that needs to produce a vtkImageData
>> object. So far it appears to work, inspection of the properties panel shows
>> the object has the correct number of points/cells and the data array
>> contains the correct data. However I cannot get a visualisation with any of
>> the representations (surface, outline, wireframe etc). Curiously, if i set
>> the display to my data array then the color bar appears with the correct
>> values, but still not visualization.
>>
>> I am using the following code to produce the image data object.
>>
>> from vtk import *
>>
>> output = self.GetOutputDataObject(0);
>>
>> # Create a VTK Grid
>> grid = vtkImageData()
>> grid.SetOrigin(0, 0, 0) # default values
>> dx=10;
>> grid.SetSpacing(dx, dx, dx)
>> grid.SetDimensions(5, 8, 10) # number of points in each direction
>> # print grid.GetNumberOfPoints()
>> # print grid.GetNumberOfCells()
>> array = vtkDoubleArray()
>> array.SetNumberOfComponents(1) # this is 3 for a vector
>> array.SetNumberOfTuples(grid.GetNumberOfPoints())
>> for i in range(grid.GetNumberOfPoints()):
>> if i < 200:
>> array.SetValue(i, 1)
>> else:
>> array.SetValue(i, 2)
>>
>> grid.GetPointData().AddArray(array)
>> # print grid.GetPointData().GetNumberOfArrays()
>> array.SetName("unit array")
>> output.ShallowCopy(grid);
>>
>> Cheers,
>> Bruce
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/
> opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From dave.demarle at kitware.com Thu Jan 22 12:44:24 2015
From: dave.demarle at kitware.com (David E DeMarle)
Date: Thu, 22 Jan 2015 12:44:24 -0500
Subject: [Paraview] Visualising image data
In-Reply-To: <CAEc4V-YqXk2yAp__6dNrHwMGZPFgRkS+=Y0uqsKuBFG2siSGEQ@mail.gmail.com>
References: <CAEc4V-aeRc08XymsKfNUwM75-wsd+e=tGsc_bMjqs+K9RY4sxw@mail.gmail.com>
<CANjZAi-B9nORZDjRgUkWYOyzibScPrWW-KFk=7Y=bQO_ioE+rg@mail.gmail.com>
<CAEc4V-YqXk2yAp__6dNrHwMGZPFgRkS+=Y0uqsKuBFG2siSGEQ@mail.gmail.com>
Message-ID: <CANjZAi_M0y9mjGvKNG2CL68qGMKPW4sMOdUZLiFkiHu3wQ2TkQ@mail.gmail.com>
Click the gear icon in properties tab to get RI script.
Then put this there:
executive = self.GetExecutive()
outInfo = executive.GetOutputInformation(0)
outInfo.Set(executive.WHOLE_EXTENT(), 0, 4, 0, 7, 0, 9)
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909
On Thu, Jan 22, 2015 at 11:51 AM, Bruce Jones <bruce.david.jones at gmail.com>
wrote:
> Thanks for the response David. Could you elaborate on this? I am not sure
> how to do what you are suggesting.
>
> Cheers,
> Bruce
>
> On Thu Jan 22 2015 at 11:46:02 AM David E DeMarle <
> dave.demarle at kitware.com> wrote:
>
>> Announce the whole extent in the RequestInformation script section.
>> That should do the trick.
>>
>>
>>
>> David E DeMarle
>> Kitware, Inc.
>> R&D Engineer
>> 21 Corporate Drive
>> Clifton Park, NY 12065-8662
>> Phone: 518-881-4909
>>
>> On Thu, Jan 22, 2015 at 11:17 AM, Bruce Jones <
>> bruce.david.jones at gmail.com> wrote:
>>
>>> Hi all,
>>>
>>> I'm working on a programmable filter that needs to produce a
>>> vtkImageData object. So far it appears to work, inspection of the
>>> properties panel shows the object has the correct number of points/cells
>>> and the data array contains the correct data. However I cannot get a
>>> visualisation with any of the representations (surface, outline, wireframe
>>> etc). Curiously, if i set the display to my data array then the color bar
>>> appears with the correct values, but still not visualization.
>>>
>>> I am using the following code to produce the image data object.
>>>
>>> from vtk import *
>>>
>>> output = self.GetOutputDataObject(0);
>>>
>>> # Create a VTK Grid
>>> grid = vtkImageData()
>>> grid.SetOrigin(0, 0, 0) # default values
>>> dx=10;
>>> grid.SetSpacing(dx, dx, dx)
>>> grid.SetDimensions(5, 8, 10) # number of points in each direction
>>> # print grid.GetNumberOfPoints()
>>> # print grid.GetNumberOfCells()
>>> array = vtkDoubleArray()
>>> array.SetNumberOfComponents(1) # this is 3 for a vector
>>> array.SetNumberOfTuples(grid.GetNumberOfPoints())
>>> for i in range(grid.GetNumberOfPoints()):
>>> if i < 200:
>>> array.SetValue(i, 1)
>>> else:
>>> array.SetValue(i, 2)
>>>
>>> grid.GetPointData().AddArray(array)
>>> # print grid.GetPointData().GetNumberOfArrays()
>>> array.SetName("unit array")
>>> output.ShallowCopy(grid);
>>>
>>> Cheers,
>>> Bruce
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at http://www.kitware.com/
>> opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>
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From bruce.david.jones at gmail.com Thu Jan 22 12:56:13 2015
From: bruce.david.jones at gmail.com (Bruce Jones)
Date: Thu, 22 Jan 2015 17:56:13 +0000
Subject: [Paraview] Visualising image data
References: <CAEc4V-aeRc08XymsKfNUwM75-wsd+e=tGsc_bMjqs+K9RY4sxw@mail.gmail.com>
<CANjZAi-B9nORZDjRgUkWYOyzibScPrWW-KFk=7Y=bQO_ioE+rg@mail.gmail.com>
<CAEc4V-YqXk2yAp__6dNrHwMGZPFgRkS+=Y0uqsKuBFG2siSGEQ@mail.gmail.com>
<CANjZAi_M0y9mjGvKNG2CL68qGMKPW4sMOdUZLiFkiHu3wQ2TkQ@mail.gmail.com>
Message-ID: <CAEc4V-ZD-Z9X-pcCLufiOzzYSi7Z2-KM6PS8_4rfsx7VSkeWCw@mail.gmail.com>
Thanks David, this did the trick.
Cheers,
Bruce
On Thu Jan 22 2015 at 12:44:45 PM David E DeMarle <dave.demarle at kitware.com>
wrote:
>
> Click the gear icon in properties tab to get RI script.
> Then put this there:
> executive = self.GetExecutive()
>
> outInfo = executive.GetOutputInformation(0)
>
> outInfo.Set(executive.WHOLE_EXTENT(), 0, 4, 0, 7, 0, 9)
>
>
>
> David E DeMarle
> Kitware, Inc.
> R&D Engineer
> 21 Corporate Drive
> Clifton Park, NY 12065-8662
> Phone: 518-881-4909
>
> On Thu, Jan 22, 2015 at 11:51 AM, Bruce Jones <bruce.david.jones at gmail.com
> > wrote:
>
>> Thanks for the response David. Could you elaborate on this? I am not sure
>> how to do what you are suggesting.
>>
>> Cheers,
>> Bruce
>>
>> On Thu Jan 22 2015 at 11:46:02 AM David E DeMarle <
>> dave.demarle at kitware.com> wrote:
>>
>>> Announce the whole extent in the RequestInformation script section.
>>> That should do the trick.
>>>
>>>
>>>
>>> David E DeMarle
>>> Kitware, Inc.
>>> R&D Engineer
>>> 21 Corporate Drive
>>> Clifton Park, NY 12065-8662
>>> Phone: 518-881-4909
>>>
>>> On Thu, Jan 22, 2015 at 11:17 AM, Bruce Jones <
>>> bruce.david.jones at gmail.com> wrote:
>>>
>>>> Hi all,
>>>>
>>>> I'm working on a programmable filter that needs to produce a
>>>> vtkImageData object. So far it appears to work, inspection of the
>>>> properties panel shows the object has the correct number of points/cells
>>>> and the data array contains the correct data. However I cannot get a
>>>> visualisation with any of the representations (surface, outline, wireframe
>>>> etc). Curiously, if i set the display to my data array then the color bar
>>>> appears with the correct values, but still not visualization.
>>>>
>>>> I am using the following code to produce the image data object.
>>>>
>>>> from vtk import *
>>>>
>>>> output = self.GetOutputDataObject(0);
>>>>
>>>> # Create a VTK Grid
>>>> grid = vtkImageData()
>>>> grid.SetOrigin(0, 0, 0) # default values
>>>> dx=10;
>>>> grid.SetSpacing(dx, dx, dx)
>>>> grid.SetDimensions(5, 8, 10) # number of points in each direction
>>>> # print grid.GetNumberOfPoints()
>>>> # print grid.GetNumberOfCells()
>>>> array = vtkDoubleArray()
>>>> array.SetNumberOfComponents(1) # this is 3 for a vector
>>>> array.SetNumberOfTuples(grid.GetNumberOfPoints())
>>>> for i in range(grid.GetNumberOfPoints()):
>>>> if i < 200:
>>>> array.SetValue(i, 1)
>>>> else:
>>>> array.SetValue(i, 2)
>>>>
>>>> grid.GetPointData().AddArray(array)
>>>> # print grid.GetPointData().GetNumberOfArrays()
>>>> array.SetName("unit array")
>>>> output.ShallowCopy(grid);
>>>>
>>>> Cheers,
>>>> Bruce
>>>>
>>>> _______________________________________________
>>>> Powered by www.kitware.com
>>>>
>>>> Visit other Kitware open-source projects at
>>>> http://www.kitware.com/opensource/opensource.html
>>>>
>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>> http://paraview.org/Wiki/ParaView
>>>>
>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>
>>>> Follow this link to subscribe/unsubscribe:
>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>
>>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at http://www.kitware.com/
>>> opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>>
>
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From zhz1993622 at 163.com Thu Jan 22 21:44:15 2015
From: zhz1993622 at 163.com (=?GBK?B?1ty649ba?=)
Date: Fri, 23 Jan 2015 10:44:15 +0800 (CST)
Subject: [Paraview] How to develop filters
In-Reply-To: <mailman.2528.1421937046.17049.paraview@paraview.org>
References: <mailman.2528.1421937046.17049.paraview@paraview.org>
Message-ID: <5603a93e.3f23.14b14acfaad.Coremail.zhz1993622@163.com>
Dear :
Hello,
I'm a fresh in paraview. Now I want to develop some my own filters , but I find that the source code of paraview is so complex and I can't find any methods to develop them in wiki and doucumention . I want to konw whether there are some interfaces for us to develop filters and there are some rules that we need to comply with . Can you tell me some methos to do this or tell me where to find it .
Thank you !
zhz
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From archaerolog at mail.ru Fri Jan 23 03:47:40 2015
From: archaerolog at mail.ru (Gena Bug)
Date: Fri, 23 Jan 2015 11:47:40 +0300
Subject: [Paraview] Fwd: Re: ANN: ParaView 4.3.1 is available for
download
In-Reply-To: <CADHSJjB69CjELfJsdABoe_ptX9G+8nZNxNqkmpe3uS0ZMSaiHw@mail.gmail.com>
References: <54BF962A.3040903@mail.ru> <54BFA12E.7070103@mail.ru>
<CADHSJjB69CjELfJsdABoe_ptX9G+8nZNxNqkmpe3uS0ZMSaiHw@mail.gmail.com>
Message-ID: <54C20AAC.9070601@mail.ru>
On 21.01.2015 17:44, Utkarsh Ayachit wrote:
> Gena,
>
>> a) can't permanently change camera settings (Edit->Settings->Camera) --
>> default values restored after restart
>
> If I am not mistaken, this was never supported, right? Mind adding a
> feature request to the bug tracker so we don't forget about this?
> Thanks.
No, it's not right. I've just checked PV 4.1.0 and it saves its camera
settings permanently.
>
>> b) it's really hard to work with advanced properties of Line Chart View
>> -- for example simply add notation to an axis is difficult! It would be
>> great to have separate window for such settings (as it was in previous
>> releases, 4.1 and earlier).
>
> That's doable. See Chapter 9, Section 9.2. Or this blog post [1]
Thanks, that's better. Not so convenient as it was before but OK
> [1] http://www.kitware.com/blog/home/post/673
>
> Utkarsh
> .
>
From grothausmann.roman at mh-hannover.de Fri Jan 23 04:20:29 2015
From: grothausmann.roman at mh-hannover.de (Dr. Roman Grothausmann)
Date: Fri, 23 Jan 2015 10:20:29 +0100
Subject: [Paraview] compile itk (VTKGlue ON) with vtk from paraview
In-Reply-To: <54C0CF2E.3060106@mh-hannover.de>
References: <54C0CF2E.3060106@mh-hannover.de>
Message-ID: <54C2125D.7090801@mh-hannover.de>
On 22/01/15 11:21, Dr. Roman Grothausmann wrote:
> Adding the abs. file locations to the build command does not help nor does
> -L/opt/paraview-4.3.1_git/lib/paraview-4.3/
I figured that the vtk dynamic libraries of PV have the ending *-pv4.3.so which
seems to be the reason why the linker does not find them. If I create symbolic
links to these files without the extension:
cd /opt/compilation/paraview-git_build/lib/
for i in *-pv*.so; do ln -s $i ${i%-pv*}.so; done
and adding -L/opt/compilation/paraview-git_build/lib/ to CMAKE_CXX_FLAGS
the compilation of ITK succeeds.
I wonder, is that the way it's meant to be done?
> What am I missing in my configuration of PV and ITK?
>
> When and where should I specify:
> CMAKE_CXX_FLAGS -fPIC
> BUILD_SHARED_LIBS ON/OFF
>
> Is this the right VTK_DIR specification for ITK:
> /opt/compilation/ParaView-v4.3.1/build/VTK
> or
> /opt/paraview-4.3.1_git/lib/cmake/paraview-4.3
>
>
>
> Many thanks for any help or hints.
> Roman
>
>
--
Dr. Roman Grothausmann
Tomographie und Digitale Bildverarbeitung
Tomography and Digital Image Analysis
Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
Medizinische Hochschule Hannover
Carl-Neuberg-Str. 1
D-30625 Hannover
Tel. +49 511 532-9574
From grothausmann.roman at mh-hannover.de Fri Jan 23 05:44:31 2015
From: grothausmann.roman at mh-hannover.de (Dr. Roman Grothausmann)
Date: Fri, 23 Jan 2015 11:44:31 +0100
Subject: [Paraview] exporting selection labels to an SVG as
editable/movable text-objects
In-Reply-To: <CA+=e1ovxNg5wuf5D1Vdx-odtAeb=Wv6LQzYqvZw233-iv+znqw@mail.gmail.com>
References: <520B95FD.5080305@mh-hannover.de>
<CA+=e1osYH1Bz3yxf=-Tz7_ZXweLo-pyrv7DoGNbgVmrDJBauRw@mail.gmail.com>
<520CC6A1.3050401@mh-hannover.de> <537DCFDE.7050901@mh-hannover.de>
<CA+=e1ovxNg5wuf5D1Vdx-odtAeb=Wv6LQzYqvZw233-iv+znqw@mail.gmail.com>
Message-ID: <54C2260F.507@mh-hannover.de>
Hi Dave,
Again some issues concerning this old topic:
On 22/05/14 14:11, David Lonie wrote:
> On Thu, May 22, 2014 at 6:22 AM, Dr. Roman Grothausmann
> <grothausmann.roman at mh-hannover.de> wrote:
>> Many thanks for fixing the Label exporter issue. It does work with 4.1 to
>> get the text exported into e.g. an SVG. However, the text is always rendered
>> as paths (always consists of triangles). Is it also possible to have the
>> text being exported as actual text-fields (like e.g. gnuplot does) that can
>> be edited with the text-tool in e.g. inkscape?
>
> There is an checkbox in the export options "Render text as paths" (see
> http://www.kitware.com/blog/home/post/508 ). It's enabled by default
> for portability, but disabling this option should do what you need.
Exporting selection labels as text ("Render text as paths" not checked) works
for me with PV-4.1.0. However, PV-4.1.0 does not allow one to specify the
formatting, like printf formats as: %.2f\circ.
PV-4.3.1 does allow one to specify the formatting, however whether "Render text
as paths" is checked or not, the output SVG does not contain any text-tags any
more, that would allow editing in inkscape or text setting by latex.
Did Your changes get lost/reverted?
I tried to find the commits that made it possible for PV-4.1 but could not find
them in the git logs:
http://www.paraview.org/gitweb?p=ParaView.git&a=search&h=HEAD&st=commit&s=gl2ps
It seems the bug number 14231 was never mentioned in the commit messages.
What is the general procedure to find the right commits in such a case?
Many thanks for looking into this.
Roman
--
Dr. Roman Grothausmann
Tomographie und Digitale Bildverarbeitung
Tomography and Digital Image Analysis
Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
Medizinische Hochschule Hannover
Carl-Neuberg-Str. 1
D-30625 Hannover
Tel. +49 511 532-9574
From grothausmann.roman at mh-hannover.de Fri Jan 23 06:51:39 2015
From: grothausmann.roman at mh-hannover.de (Dr. Roman Grothausmann)
Date: Fri, 23 Jan 2015 12:51:39 +0100
Subject: [Paraview] exporting selection labels to an SVG as
editable/movable text-objects
In-Reply-To: <54C2260F.507@mh-hannover.de>
References: <520B95FD.5080305@mh-hannover.de>
<CA+=e1osYH1Bz3yxf=-Tz7_ZXweLo-pyrv7DoGNbgVmrDJBauRw@mail.gmail.com>
<520CC6A1.3050401@mh-hannover.de> <537DCFDE.7050901@mh-hannover.de>
<CA+=e1ovxNg5wuf5D1Vdx-odtAeb=Wv6LQzYqvZw233-iv+znqw@mail.gmail.com>
<54C2260F.507@mh-hannover.de>
Message-ID: <54C235CB.8030407@mh-hannover.de>
I just noticed that the problem only occurs if a $ (as needed for latex math) is
used in the format string, e.g. $%.2f^\circ$. If I remove the $ signs the text
IS exported with text-tags.
Does the $ sign have a special meaning here in PV?
On 23/01/15 11:44, Dr. Roman Grothausmann wrote:
> Hi Dave,
>
>
> Again some issues concerning this old topic:
> On 22/05/14 14:11, David Lonie wrote:
>> On Thu, May 22, 2014 at 6:22 AM, Dr. Roman Grothausmann
>> <grothausmann.roman at mh-hannover.de> wrote:
>>> Many thanks for fixing the Label exporter issue. It does work with 4.1 to
>>> get the text exported into e.g. an SVG. However, the text is always rendered
>>> as paths (always consists of triangles). Is it also possible to have the
>>> text being exported as actual text-fields (like e.g. gnuplot does) that can
>>> be edited with the text-tool in e.g. inkscape?
>>
>> There is an checkbox in the export options "Render text as paths" (see
>> http://www.kitware.com/blog/home/post/508 ). It's enabled by default
>> for portability, but disabling this option should do what you need.
>
> Exporting selection labels as text ("Render text as paths" not checked) works
> for me with PV-4.1.0. However, PV-4.1.0 does not allow one to specify the
> formatting, like printf formats as: %.2f\circ.
> PV-4.3.1 does allow one to specify the formatting, however whether "Render text
> as paths" is checked or not, the output SVG does not contain any text-tags any
> more, that would allow editing in inkscape or text setting by latex.
>
> Did Your changes get lost/reverted?
>
> I tried to find the commits that made it possible for PV-4.1 but could not find
> them in the git logs:
> http://www.paraview.org/gitweb?p=ParaView.git&a=search&h=HEAD&st=commit&s=gl2ps
> It seems the bug number 14231 was never mentioned in the commit messages.
>
> What is the general procedure to find the right commits in such a case?
>
> Many thanks for looking into this.
> Roman
>
--
Dr. Roman Grothausmann
Tomographie und Digitale Bildverarbeitung
Tomography and Digital Image Analysis
Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
Medizinische Hochschule Hannover
Carl-Neuberg-Str. 1
D-30625 Hannover
Tel. +49 511 532-9574
From david.lonie at kitware.com Fri Jan 23 09:22:22 2015
From: david.lonie at kitware.com (David Lonie)
Date: Fri, 23 Jan 2015 09:22:22 -0500
Subject: [Paraview] exporting selection labels to an SVG as
editable/movable text-objects
In-Reply-To: <54C235CB.8030407@mh-hannover.de>
References: <520B95FD.5080305@mh-hannover.de>
<CA+=e1osYH1Bz3yxf=-Tz7_ZXweLo-pyrv7DoGNbgVmrDJBauRw@mail.gmail.com>
<520CC6A1.3050401@mh-hannover.de> <537DCFDE.7050901@mh-hannover.de>
<CA+=e1ovxNg5wuf5D1Vdx-odtAeb=Wv6LQzYqvZw233-iv+znqw@mail.gmail.com>
<54C2260F.507@mh-hannover.de> <54C235CB.8030407@mh-hannover.de>
Message-ID: <CA+=e1ostiBCCi=zG_j8y8F_4N7g_6EBjD7fpQGHViwiekq3R9Q@mail.gmail.com>
>
> On 23/01/15 11:44, Dr. Roman Grothausmann wrote:
>
>> Hi Dave,
>>
>>
>> Again some issues concerning this old topic:
>> On 22/05/14 14:11, David Lonie wrote:
>>
>>> On Thu, May 22, 2014 at 6:22 AM, Dr. Roman Grothausmann
>>> <grothausmann.roman at mh-hannover.de> wrote:
>>>
>>>> Many thanks for fixing the Label exporter issue. It does work with 4.1
>>>> to
>>>> get the text exported into e.g. an SVG. However, the text is always
>>>> rendered
>>>> as paths (always consists of triangles). Is it also possible to have the
>>>> text being exported as actual text-fields (like e.g. gnuplot does) that
>>>> can
>>>> be edited with the text-tool in e.g. inkscape?
>>>>
>>>
>>> There is an checkbox in the export options "Render text as paths" (see
>>> http://www.kitware.com/blog/home/post/508 ). It's enabled by default
>>> for portability, but disabling this option should do what you need.
>>>
>>
>> Exporting selection labels as text ("Render text as paths" not checked)
>> works
>> for me with PV-4.1.0. However, PV-4.1.0 does not allow one to specify the
>> formatting, like printf formats as: %.2f\circ.
>> PV-4.3.1 does allow one to specify the formatting, however whether
>> "Render text
>> as paths" is checked or not, the output SVG does not contain any
>> text-tags any
>> more, that would allow editing in inkscape or text setting by latex.
>>
>> Did Your changes get lost/reverted?
>>
>> I tried to find the commits that made it possible for PV-4.1 but could
>> not find
>> them in the git logs:
>> http://www.paraview.org/gitweb?p=ParaView.git&a=
>> search&h=HEAD&st=commit&s=gl2ps
>> It seems the bug number 14231 was never mentioned in the commit messages.
>>
>> What is the general procedure to find the right commits in such a case?
>>
>
The commit that made the change is in VTK, not ParaView (the histories are
stored in separate repositories):
http://www.vtk.org/gitweb?p=VTK.git;a=commit;h=78d211edd3aa7d8019bc83b562166d957feec656
On Fri, Jan 23, 2015 at 6:51 AM, Dr. Roman Grothausmann <
grothausmann.roman at mh-hannover.de> wrote:
> I just noticed that the problem only occurs if a $ (as needed for latex
> math) is used in the format string, e.g. $%.2f^\circ$. If I remove the $
> signs the text IS exported with text-tags.
> Does the $ sign have a special meaning here in PV?
>
The issue here is that the MathText is not like regular text -- regular
text can go directly into the vector document with a reasonable expectation
that it will be rendered properly by the viewer. Some of the more complex
mathematical expressions MathText is capable of rendering cannot be encoded
as pure text in the document.
So any strings that contain MathText expressions (e.g. those containing a
pair of unescaped $ characters) will always be rendered as a path, since we
know that these will always come out correctly.
Dave
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From sebastien.jourdain at kitware.com Fri Jan 23 10:45:58 2015
From: sebastien.jourdain at kitware.com (Sebastien Jourdain)
Date: Fri, 23 Jan 2015 08:45:58 -0700
Subject: [Paraview] How to develop filters
In-Reply-To: <5603a93e.3f23.14b14acfaad.Coremail.zhz1993622@163.com>
References: <mailman.2528.1421937046.17049.paraview@paraview.org>
<5603a93e.3f23.14b14acfaad.Coremail.zhz1993622@163.com>
Message-ID: <CABObKxdKzdkOeHPWeEJmeiq=rjU3NTzafeSiTmhfLMDwujWTFA@mail.gmail.com>
You can look at the Plugins directory. And maybe something simple like
${src}/Plugins/ForceTime/*.
The core of the filter should be like writing regular VTK filter. Then it
is just a matter to expose it to ParaView via some XML descriptor.
Seb
On Thu, Jan 22, 2015 at 7:44 PM, ??? <zhz1993622 at 163.com> wrote:
> Dear :
> Hello,
> I'm a fresh in paraview. Now I want to develop some my own filters ,
> but I find that the source code of paraview is so complex and I can't find
> any methods to develop them in wiki and doucumention . I want to konw
> whether there are some interfaces for us to develop filters and there are
> some rules that we need to comply with . Can you tell me some methos to do
> this or tell me where to find it .
> Thank you !
>
>
>
> zhz
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From dave.demarle at kitware.com Fri Jan 23 10:54:44 2015
From: dave.demarle at kitware.com (David E DeMarle)
Date: Fri, 23 Jan 2015 10:54:44 -0500
Subject: [Paraview] How to develop filters
In-Reply-To: <CABObKxdKzdkOeHPWeEJmeiq=rjU3NTzafeSiTmhfLMDwujWTFA@mail.gmail.com>
References: <mailman.2528.1421937046.17049.paraview@paraview.org>
<5603a93e.3f23.14b14acfaad.Coremail.zhz1993622@163.com>
<CABObKxdKzdkOeHPWeEJmeiq=rjU3NTzafeSiTmhfLMDwujWTFA@mail.gmail.com>
Message-ID: <CANjZAi9ZnE3M=quZ=f4xgtL4KdQPZ1Sf4j8kvsH_2H5psSmu8g@mail.gmail.com>
I concur.
Basically what you need to know is how to write VTK algorithms and much of
that involves familiarity with the vtkDataSet API. You need to be
comfortable with datasets in order to inspect the input and populate the
output of your filter.
There are resources and examples on the web to help get you started.
Chapters 16 and 17 of the VTK User's guide are also helpful, as are the
courses that Kitware offers.
happy coding!
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909
On Fri, Jan 23, 2015 at 10:45 AM, Sebastien Jourdain <
sebastien.jourdain at kitware.com> wrote:
> You can look at the Plugins directory. And maybe something simple like
> ${src}/Plugins/ForceTime/*.
> The core of the filter should be like writing regular VTK filter. Then it
> is just a matter to expose it to ParaView via some XML descriptor.
>
> Seb
>
> On Thu, Jan 22, 2015 at 7:44 PM, ??? <zhz1993622 at 163.com> wrote:
>
>> Dear :
>> Hello,
>> I'm a fresh in paraview. Now I want to develop some my own filters ,
>> but I find that the source code of paraview is so complex and I can't find
>> any methods to develop them in wiki and doucumention . I want to konw
>> whether there are some interfaces for us to develop filters and there are
>> some rules that we need to comply with . Can you tell me some methos to do
>> this or tell me where to find it .
>> Thank you !
>>
>>
>>
>> zhz
>>
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From ceccon at poli.ufrj.br Fri Jan 23 11:03:47 2015
From: ceccon at poli.ufrj.br (Pedro Ceccon Thurler)
Date: Fri, 23 Jan 2015 14:03:47 -0200
Subject: [Paraview] How to plot data from a specific point over time?
In-Reply-To: <CAMaOp+HwUs4tc-GAb4yQy0iPFV86+bU3UeY8=RNHxb0G2tHYTQ@mail.gmail.com>
References: <CABX6FTx3tsubRrHMBRJOxsNs3gBqHg_F536JJY6b=3M8utpDUA@mail.gmail.com>
<54BFD76F.8070301@gmail.com>
<CABX6FTyrswVmdUaHAYdfOaD3LcoMhC++8RkVSHo5W67mZ8xnWg@mail.gmail.com>
<CAMaOp+HwUs4tc-GAb4yQy0iPFV86+bU3UeY8=RNHxb0G2tHYTQ@mail.gmail.com>
Message-ID: <CABX6FTwAZWjOE0602J1bHQ29LCpexGKz5XHjS3Kxuh9HnstBXg@mail.gmail.com>
Thank you all, guys!
I solved my problem. I'm able to plot the data now.
But, only one more question: is it possible to export this plot data to a
Excel file?
If it's possible, how do I do that?
Pedro Ceccon Thurler
Bolsista CNPq - Laborat?rio de Simula??o de Sistemas de Constru??o Naval
Departamento de Engenharia Naval e Oce?nica - UFRJ
Cel: (21) 9 8234-9794
2015-01-21 14:58 GMT-02:00 Andy Bauer <andy.bauer at kitware.com>:
> For moving grids or grids that don't have a grid point exactly at the
> coordinate you want to plot over time, you can use the probe filter to get
> the desired location and then use the plot selection over time for that.
>
> On Wed, Jan 21, 2015 at 11:57 AM, Pedro Ceccon Thurler <
> ceccon at poli.ufrj.br> wrote:
>
>> The guys from the lab did an experiment and measured the residual stress
>> on some points with specific coordinates.
>> I have to measure the stress on the same points along time in my
>> simulation so i can compare the results with the real values and validate
>> my model.
>> But I don't know how to do that.
>>
>> Pedro Ceccon Thurler
>>
>> Bolsista CNPq - Laborat?rio de Simula??o de Sistemas de Constru??o Naval
>> Departamento de Engenharia Naval e Oce?nica - UFRJ
>> Cel: (21) 9 8234-9794
>>
>> 2015-01-21 14:44 GMT-02:00 Armin Wehrfritz <dkxls23 at gmail.com>:
>>
>> Have you tried the "Plot Selection Over Time" filter?
>>> It's in "Filter->Data Analysis". You can select cell or point data.
>>>
>>> -Armin
>>>
>>>
>>>
>>>
>>> On 01/21/2015 06:35 PM, Pedro Ceccon Thurler wrote:
>>>
>>>> Hey guys!
>>>> I'm in trouble trying to make some plots in paraview.
>>>> For my analysis, it's important to plot data from a specific point over
>>>> time.
>>>> I'm trying some filters, but I'm not succeeding. Do you have some tips
>>>> or advices? Thank you for your attention.
>>>>
>>>> Pedro Ceccon Thurler
>>>>
>>>> Bolsista CNPq - Laborat?rio de Simula??o de Sistemas de Constru??o Naval
>>>> Departamento de Engenharia Naval e Oce?nica - UFRJ
>>>> Cel: (21) 9 8234-9794
>>>>
>>>>
>>>> _______________________________________________
>>>> Powered by www.kitware.com
>>>>
>>>> Visit other Kitware open-source projects at http://www.kitware.com/
>>>> opensource/opensource.html
>>>>
>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>> http://paraview.org/Wiki/ParaView
>>>>
>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>
>>>> Follow this link to subscribe/unsubscribe:
>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>
>>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at http://www.kitware.com/
>>> opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>
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From dave.demarle at kitware.com Fri Jan 23 11:12:06 2015
From: dave.demarle at kitware.com (David E DeMarle)
Date: Fri, 23 Jan 2015 11:12:06 -0500
Subject: [Paraview] How to plot data from a specific point over time?
In-Reply-To: <CABX6FTwAZWjOE0602J1bHQ29LCpexGKz5XHjS3Kxuh9HnstBXg@mail.gmail.com>
References: <CABX6FTx3tsubRrHMBRJOxsNs3gBqHg_F536JJY6b=3M8utpDUA@mail.gmail.com>
<54BFD76F.8070301@gmail.com>
<CABX6FTyrswVmdUaHAYdfOaD3LcoMhC++8RkVSHo5W67mZ8xnWg@mail.gmail.com>
<CAMaOp+HwUs4tc-GAb4yQy0iPFV86+bU3UeY8=RNHxb0G2tHYTQ@mail.gmail.com>
<CABX6FTwAZWjOE0602J1bHQ29LCpexGKz5XHjS3Kxuh9HnstBXg@mail.gmail.com>
Message-ID: <CANjZAi-9gLbzBKFrfAPZU+dGPmC-49_-mijD4gddaMpABcREJw@mail.gmail.com>
Click on the filter in the pipeline and then go to save data.
Choose csv format, which excel will readily read.
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909
On Fri, Jan 23, 2015 at 11:03 AM, Pedro Ceccon Thurler <ceccon at poli.ufrj.br>
wrote:
> Thank you all, guys!
> I solved my problem. I'm able to plot the data now.
> But, only one more question: is it possible to export this plot data to a
> Excel file?
> If it's possible, how do I do that?
>
>
>
> Pedro Ceccon Thurler
>
> Bolsista CNPq - Laborat?rio de Simula??o de Sistemas de Constru??o Naval
> Departamento de Engenharia Naval e Oce?nica - UFRJ
> Cel: (21) 9 8234-9794
>
> 2015-01-21 14:58 GMT-02:00 Andy Bauer <andy.bauer at kitware.com>:
>
>> For moving grids or grids that don't have a grid point exactly at the
>> coordinate you want to plot over time, you can use the probe filter to get
>> the desired location and then use the plot selection over time for that.
>>
>> On Wed, Jan 21, 2015 at 11:57 AM, Pedro Ceccon Thurler <
>> ceccon at poli.ufrj.br> wrote:
>>
>>> The guys from the lab did an experiment and measured the residual stress
>>> on some points with specific coordinates.
>>> I have to measure the stress on the same points along time in my
>>> simulation so i can compare the results with the real values and validate
>>> my model.
>>> But I don't know how to do that.
>>>
>>> Pedro Ceccon Thurler
>>>
>>> Bolsista CNPq - Laborat?rio de Simula??o de Sistemas de Constru??o Naval
>>> Departamento de Engenharia Naval e Oce?nica - UFRJ
>>> Cel: (21) 9 8234-9794
>>>
>>> 2015-01-21 14:44 GMT-02:00 Armin Wehrfritz <dkxls23 at gmail.com>:
>>>
>>> Have you tried the "Plot Selection Over Time" filter?
>>>> It's in "Filter->Data Analysis". You can select cell or point data.
>>>>
>>>> -Armin
>>>>
>>>>
>>>>
>>>>
>>>> On 01/21/2015 06:35 PM, Pedro Ceccon Thurler wrote:
>>>>
>>>>> Hey guys!
>>>>> I'm in trouble trying to make some plots in paraview.
>>>>> For my analysis, it's important to plot data from a specific point over
>>>>> time.
>>>>> I'm trying some filters, but I'm not succeeding. Do you have some tips
>>>>> or advices? Thank you for your attention.
>>>>>
>>>>> Pedro Ceccon Thurler
>>>>>
>>>>> Bolsista CNPq - Laborat?rio de Simula??o de Sistemas de Constru??o
>>>>> Naval
>>>>> Departamento de Engenharia Naval e Oce?nica - UFRJ
>>>>> Cel: (21) 9 8234-9794
>>>>>
>>>>>
>>>>> _______________________________________________
>>>>> Powered by www.kitware.com
>>>>>
>>>>> Visit other Kitware open-source projects at http://www.kitware.com/
>>>>> opensource/opensource.html
>>>>>
>>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>>> http://paraview.org/Wiki/ParaView
>>>>>
>>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>>
>>>>> Follow this link to subscribe/unsubscribe:
>>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>>
>>>>> _______________________________________________
>>>> Powered by www.kitware.com
>>>>
>>>> Visit other Kitware open-source projects at http://www.kitware.com/
>>>> opensource/opensource.html
>>>>
>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>> http://paraview.org/Wiki/ParaView
>>>>
>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>
>>>> Follow this link to subscribe/unsubscribe:
>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>
>>>
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>>>
>>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From matt.mccormick at kitware.com Fri Jan 23 12:15:45 2015
From: matt.mccormick at kitware.com (Matt McCormick)
Date: Fri, 23 Jan 2015 12:15:45 -0500
Subject: [Paraview] [ITK-users] compile itk (VTKGlue ON) with vtk from
paraview
In-Reply-To: <54C2125D.7090801@mh-hannover.de>
References: <54C0CF2E.3060106@mh-hannover.de> <54C2125D.7090801@mh-hannover.de>
Message-ID: <CALzTN-SJcZYJT+twE_fXXWi7tyTe6u9JhFSGy1W03-C9PU-=LA@mail.gmail.com>
Hi Roman,
Thanks for looking into the issue and reporting it to the mailing list.
Paraview should be installing VTKTargets.cmake, which tells the build
system where to find the libraries. Note that there might be two
VTKTargets.cmake files that are generated -- one for the build tree
and one for the install tree.
HTH,
Matt
On Fri, Jan 23, 2015 at 4:20 AM, Dr. Roman Grothausmann
<grothausmann.roman at mh-hannover.de> wrote:
>
> On 22/01/15 11:21, Dr. Roman Grothausmann wrote:
>>
>> Adding the abs. file locations to the build command does not help nor does
>> -L/opt/paraview-4.3.1_git/lib/paraview-4.3/
>
>
> I figured that the vtk dynamic libraries of PV have the ending *-pv4.3.so
> which seems to be the reason why the linker does not find them. If I create
> symbolic links to these files without the extension:
>
> cd /opt/compilation/paraview-git_build/lib/
> for i in *-pv*.so; do ln -s $i ${i%-pv*}.so; done
>
> and adding -L/opt/compilation/paraview-git_build/lib/ to CMAKE_CXX_FLAGS
> the compilation of ITK succeeds.
>
> I wonder, is that the way it's meant to be done?
>
>
>
>> What am I missing in my configuration of PV and ITK?
>>
>> When and where should I specify:
>> CMAKE_CXX_FLAGS -fPIC
>> BUILD_SHARED_LIBS ON/OFF
>>
>> Is this the right VTK_DIR specification for ITK:
>> /opt/compilation/ParaView-v4.3.1/build/VTK
>> or
>> /opt/paraview-4.3.1_git/lib/cmake/paraview-4.3
>>
>>
>>
>> Many thanks for any help or hints.
>> Roman
>>
>>
>
> --
> Dr. Roman Grothausmann
>
> Tomographie und Digitale Bildverarbeitung
> Tomography and Digital Image Analysis
>
> Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
> Medizinische Hochschule Hannover
> Carl-Neuberg-Str. 1
> D-30625 Hannover
>
> Tel. +49 511 532-9574
> _____________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Kitware offers ITK Training Courses, for more information visit:
> http://www.kitware.com/products/protraining.php
>
> Please keep messages on-topic and check the ITK FAQ at:
> http://www.itk.org/Wiki/ITK_FAQ
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/insight-users
From wascott at sandia.gov Fri Jan 23 15:44:39 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Fri, 23 Jan 2015 20:44:39 +0000
Subject: [Paraview] Average data from multiple nodes
Message-ID: <0b2faf9e0c1d4697844feeef84eef2cc@ES05AMSNLNT.srn.sandia.gov>
I was wondering if there was a tool that could average values from multiple nodes and plot that over time. For example, I would like to take a selection of nodes, average their velocities, and plot that vs. time.
Thanks for the help.
Alan
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From wascott at sandia.gov Fri Jan 23 15:51:16 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Fri, 23 Jan 2015 20:51:16 +0000
Subject: [Paraview] [EXTERNAL] Plotting data to an existing model's
surface
In-Reply-To: <CAFw8VoR=PX2pEkq1D3T99brpzOjQ4WQ9+wLXAbG3rPQRNic1yA@mail.gmail.com>
References: <CAFw8VoR=PX2pEkq1D3T99brpzOjQ4WQ9+wLXAbG3rPQRNic1yA@mail.gmail.com>
Message-ID: <5f735f96ac0644ffac610a9b2c90c514@ES05AMSNLNT.srn.sandia.gov>
Mark,
I don?t know the answer to your question, but a few years ago I wrote a wiki page on converting .csv file data into points and structured grids. The write-up is here: http://www.paraview.org/Wiki/Data_formats. Hope that helps.
Alan
From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Mark Belan
Sent: Thursday, January 22, 2015 9:50 AM
To: paraview at paraview.org
Subject: [EXTERNAL] [Paraview] Plotting data to an existing model's surface
Hello all,
I'm a graduate student in geology trying to do some visual data work, but I'm afraid my inexperience with paraview is making things a bit difficult for me.
Essentially what I'm trying to create is a 3D model of a rock that has its surface coloured to show spatial distribution of a physical property associated with certain areas on the rock.
I was able to reproduce the rock I sample from using a 3D scanner but I have no idea how to go about selecting particular areas of the rock's surface, assigning a value to that "area", and having the program interpolate between multiple "areas". Essentially I'd like this to produce a color gradient showcasing the changing values.
Can anyone offer some guidance/direction? I had someone at my campus suggest creating a .csv file with x,y,z coordinates of the particular areas of the model of interest, but after doing that all I've produced are "points"...not sure how to specify the association to the model and color and interpolation, etc.
Thanks for any help,
- Mark
--
Mark Belan, B. Art Sc.
M. Sc. Candidate - Astrobiology
Lewis and Ruth Sherman Graduate Fellow
McMaster University
School of Geography and Earth Sciences
GSB 323
1280 Main Street West
Hamilton, Ontario
Canada
L8S 4L8
Art: www.markbelan.com<http://www.markbelan.com>
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From dave.demarle at kitware.com Fri Jan 23 16:24:56 2015
From: dave.demarle at kitware.com (David E DeMarle)
Date: Fri, 23 Jan 2015 16:24:56 -0500
Subject: [Paraview] [EXTERNAL] Plotting data to an existing model's
surface
In-Reply-To: <5f735f96ac0644ffac610a9b2c90c514@ES05AMSNLNT.srn.sandia.gov>
References: <CAFw8VoR=PX2pEkq1D3T99brpzOjQ4WQ9+wLXAbG3rPQRNic1yA@mail.gmail.com>
<5f735f96ac0644ffac610a9b2c90c514@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <CANjZAi_gTukgdj6vWuOedzHCVNO3sPYQW6DxySz5-ifZ3O9=HQ@mail.gmail.com>
After you
1) get the list of points and values in the csv file:
x,y,z,val1,val2,?
2) read into paraview and converted from a table to a vtkpointset as Alan
suggested
3) try the vtkSurfaceReconstruction filter to convert it into a mesh.
That isn't exposed in ParaView (maybe not parallel aware) so use this
python programmable filter to do use it:
import vtk
pdi = self.GetPolyDataInput()
subf1 = vtk.vtkSurfaceReconstructionFilter()
subf1.SetInputData(pdi)
subf2 = vtk.vtkContourFilter()
subf2.SetInputConnection(subf1.GetOutputPort())
subf2.SetValue(0, 0.0)
subf2.Update()
pdo = self.GetPolyDataOutput()
pdo.ShallowCopy(subf2.GetOutput())
ParaView will then happily interpolate values across the faces of the mesh
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909
On Fri, Jan 23, 2015 at 3:51 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> Mark,
>
> I don?t know the answer to your question, but a few years ago I wrote a
> wiki page on converting .csv file data into points and structured grids.
> The write-up is here: http://www.paraview.org/Wiki/Data_formats. Hope
> that helps.
>
>
>
> Alan
>
>
>
> *From:* ParaView [mailto:paraview-bounces at paraview.org] *On Behalf Of *Mark
> Belan
> *Sent:* Thursday, January 22, 2015 9:50 AM
> *To:* paraview at paraview.org
> *Subject:* [EXTERNAL] [Paraview] Plotting data to an existing model's
> surface
>
>
>
> Hello all,
>
> I'm a graduate student in geology trying to do some visual data work, but
> I'm afraid my inexperience with paraview is making things a bit difficult
> for me.
>
> Essentially what I'm trying to create is a 3D model of a rock that has its
> surface coloured to show spatial distribution of a physical property
> associated with certain areas on the rock.
>
> I was able to reproduce the rock I sample from using a 3D scanner but I
> have no idea how to go about selecting particular areas of the rock's
> surface, assigning a value to that "area", and having the program
> interpolate between multiple "areas". Essentially I'd like this to produce
> a color gradient showcasing the changing values.
>
> Can anyone offer some guidance/direction? I had someone at my campus
> suggest creating a .csv file with x,y,z coordinates of the particular areas
> of the model of interest, but after doing that all I've produced are
> "points"...not sure how to specify the association to the model and color
> and interpolation, etc.
>
> Thanks for any help,
>
> - Mark
> --
>
> *Mark Belan*, B. Art Sc.
> *M. Sc. Candidate - Astrobiology*
>
> *Lewis and Ruth Sherman Graduate Fellow*
>
> McMaster University
>
> School of Geography and Earth Sciences
>
> GSB 323
> 1280 Main Street West
> Hamilton, Ontario
> Canada
> L8S 4L8
>
> *Art*: www.markbelan.com
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From wascott at sandia.gov Fri Jan 23 19:43:50 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Sat, 24 Jan 2015 00:43:50 +0000
Subject: [Paraview] Replication and rotation of 45 degree wedges?
Message-ID: <88984e6d5c2d45d2ac679bdef58ecef6@ES05AMSNLNT.srn.sandia.gov>
I have a 3D pie-wedge simulation which spans 45 degrees in angle. Is there a way to make 45 degree copies and rotate them in the angular direction in order to visualize the 360-deg view?
Thanks,
Alan
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From timcfagan at gmail.com Sun Jan 25 00:20:05 2015
From: timcfagan at gmail.com (timcfagan .)
Date: Sun, 25 Jan 2015 16:20:05 +1100
Subject: [Paraview] temporal threshold
Message-ID: <CAMYd9p-qVD57=RYMH5c1ih2FiW9P93ra0_=47pkFA2K_CQ1C_g@mail.gmail.com>
I'm trying to apply a threshold to a temporal data set. I would like to see
which nodes reach a certain temperature over the whole simulation. At the
moment the threshold will only see one moment in time.
Maybe there a way to apply a temporal threshold? Such that the filter will
apply the scalar value for all timesteps?
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From dave.demarle at kitware.com Sun Jan 25 09:13:01 2015
From: dave.demarle at kitware.com (David E DeMarle)
Date: Sun, 25 Jan 2015 09:13:01 -0500
Subject: [Paraview] temporal threshold
In-Reply-To: <CAMYd9p-qVD57=RYMH5c1ih2FiW9P93ra0_=47pkFA2K_CQ1C_g@mail.gmail.com>
References: <CAMYd9p-qVD57=RYMH5c1ih2FiW9P93ra0_=47pkFA2K_CQ1C_g@mail.gmail.com>
Message-ID: <CANjZAi8cOW-UZgWb0wz0HMVEwu8HxfrxJDpeBU631FMDyX0+Aw@mail.gmail.com>
the temporal statistics filter will show you the max/min/avg etc over all
time. Threshold that to identify the nodes of interest.
On Sunday, January 25, 2015, timcfagan . <timcfagan at gmail.com> wrote:
> I'm trying to apply a threshold to a temporal data set. I would like to
> see which nodes reach a certain temperaturetry over the whole simulation.
> At the moment the threshold will only see one moment in time.
>
> Maybe there a way to apply a temporal threshold? Such that the filter will
> apply the scalar value for all timesteps?
>
--
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909
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From timcfagan at gmail.com Sun Jan 25 22:28:51 2015
From: timcfagan at gmail.com (timcfagan .)
Date: Mon, 26 Jan 2015 14:28:51 +1100
Subject: [Paraview] temporal threshold
In-Reply-To: <CANjZAi8cOW-UZgWb0wz0HMVEwu8HxfrxJDpeBU631FMDyX0+Aw@mail.gmail.com>
References: <CAMYd9p-qVD57=RYMH5c1ih2FiW9P93ra0_=47pkFA2K_CQ1C_g@mail.gmail.com>
<CANjZAi8cOW-UZgWb0wz0HMVEwu8HxfrxJDpeBU631FMDyX0+Aw@mail.gmail.com>
Message-ID: <CAMYd9p9huV+qP58ScpEn1VOBAiG6hYDu6HOY+YJeN1OtGns59Q@mail.gmail.com>
Thanks, I've run the temporal statistics filter on my data, however it
doesn't seem to be giving any data output. It spends a while calculating,
but the output is just a solid color representation of my object. The
information tab also shows no data.
My input is an unstructured grid, with point data. Am I missing something?
On Mon, Jan 26, 2015 at 1:13 AM, David E DeMarle <dave.demarle at kitware.com>
wrote:
> the temporal statistics filter will show you the max/min/avg etc over all
> time. Threshold that to identify the nodes of interest.
>
> On Sunday, January 25, 2015, timcfagan . <timcfagan at gmail.com> wrote:
>
>> I'm trying to apply a threshold to a temporal data set. I would like to
>> see which nodes reach a certain temperaturetry over the whole simulation.
>> At the moment the threshold will only see one moment in time.
>>
>> Maybe there a way to apply a temporal threshold? Such that the filter
>> will apply the scalar value for all timesteps?
>>
>
>
> --
> David E DeMarle
> Kitware, Inc.
> R&D Engineer
> 21 Corporate Drive
> Clifton Park, NY 12065-8662
> Phone: 518-881-4909
>
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From grothausmann.roman at mh-hannover.de Mon Jan 26 04:02:20 2015
From: grothausmann.roman at mh-hannover.de (Dr. Roman Grothausmann)
Date: Mon, 26 Jan 2015 10:02:20 +0100
Subject: [Paraview] [ITK-users] compile itk (VTKGlue ON) with vtk from
paraview
In-Reply-To: <CALzTN-SJcZYJT+twE_fXXWi7tyTe6u9JhFSGy1W03-C9PU-=LA@mail.gmail.com>
References: <54C0CF2E.3060106@mh-hannover.de> <54C2125D.7090801@mh-hannover.de>
<CALzTN-SJcZYJT+twE_fXXWi7tyTe6u9JhFSGy1W03-C9PU-=LA@mail.gmail.com>
Message-ID: <54C6029C.4040600@mh-hannover.de>
Hi Matt,
Thank You very much for Your reply.
I can only find one VTKTargets.cmake in /opt/compilation/paraview-git_build/VTK/
It seems though that it is lacking the relevant entries for the libraries that
troubled me, e.g. vtkPVPythonCatalyst and vtkUtilitiesPythonInitializer.
I'm about to publish the ITK-VTK PV plugin in the Midas Journal, what
installation instructions should I give there?
Will the testing environment be able to compile this plugin and its tests or
should I disable automatic testing for this contribution?
Many thanks for looking into this.
Roman
On 23/01/15 18:15, Matt McCormick wrote:
> Hi Roman,
>
> Thanks for looking into the issue and reporting it to the mailing list.
>
> Paraview should be installing VTKTargets.cmake, which tells the build
> system where to find the libraries. Note that there might be two
> VTKTargets.cmake files that are generated -- one for the build tree
> and one for the install tree.
>
> HTH,
> Matt
>
> On Fri, Jan 23, 2015 at 4:20 AM, Dr. Roman Grothausmann
> <grothausmann.roman at mh-hannover.de> wrote:
>>
>> On 22/01/15 11:21, Dr. Roman Grothausmann wrote:
>>>
>>> Adding the abs. file locations to the build command does not help nor does
>>> -L/opt/paraview-4.3.1_git/lib/paraview-4.3/
>>
>>
>> I figured that the vtk dynamic libraries of PV have the ending *-pv4.3.so
>> which seems to be the reason why the linker does not find them. If I create
>> symbolic links to these files without the extension:
>>
>> cd /opt/compilation/paraview-git_build/lib/
>> for i in *-pv*.so; do ln -s $i ${i%-pv*}.so; done
>>
>> and adding -L/opt/compilation/paraview-git_build/lib/ to CMAKE_CXX_FLAGS
>> the compilation of ITK succeeds.
>>
>> I wonder, is that the way it's meant to be done?
>>
>>
>>
>>> What am I missing in my configuration of PV and ITK?
>>>
>>> When and where should I specify:
>>> CMAKE_CXX_FLAGS -fPIC
>>> BUILD_SHARED_LIBS ON/OFF
>>>
>>> Is this the right VTK_DIR specification for ITK:
>>> /opt/compilation/ParaView-v4.3.1/build/VTK
>>> or
>>> /opt/paraview-4.3.1_git/lib/cmake/paraview-4.3
>>>
>>>
>>>
>>> Many thanks for any help or hints.
>>> Roman
>>>
>>>
>>
>> --
>> Dr. Roman Grothausmann
>>
>> Tomographie und Digitale Bildverarbeitung
>> Tomography and Digital Image Analysis
>>
>> Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
>> Medizinische Hochschule Hannover
>> Carl-Neuberg-Str. 1
>> D-30625 Hannover
>>
>> Tel. +49 511 532-9574
>> _____________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Kitware offers ITK Training Courses, for more information visit:
>> http://www.kitware.com/products/protraining.php
>>
>> Please keep messages on-topic and check the ITK FAQ at:
>> http://www.itk.org/Wiki/ITK_FAQ
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/insight-users
--
Dr. Roman Grothausmann
Tomographie und Digitale Bildverarbeitung
Tomography and Digital Image Analysis
Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
Medizinische Hochschule Hannover
Carl-Neuberg-Str. 1
D-30625 Hannover
Tel. +49 511 532-9574
From belanma at mcmaster.ca Mon Jan 26 10:14:44 2015
From: belanma at mcmaster.ca (Mark Belan)
Date: Mon, 26 Jan 2015 10:14:44 -0500
Subject: [Paraview] [EXTERNAL] Plotting data to an existing model's
surface
In-Reply-To: <CANjZAi_gTukgdj6vWuOedzHCVNO3sPYQW6DxySz5-ifZ3O9=HQ@mail.gmail.com>
References: <CAFw8VoR=PX2pEkq1D3T99brpzOjQ4WQ9+wLXAbG3rPQRNic1yA@mail.gmail.com>
<5f735f96ac0644ffac610a9b2c90c514@ES05AMSNLNT.srn.sandia.gov>
<CANjZAi_gTukgdj6vWuOedzHCVNO3sPYQW6DxySz5-ifZ3O9=HQ@mail.gmail.com>
Message-ID: <CAFw8VoTAGhni6EOeNL77d6O3TekHmuu+w1ig2cdESVv4LU80RQ@mail.gmail.com>
Hi David,
Thanks for your suggestion. I was able to successfully render my points in
a .csv file into specific points on the model (thanks Alan!), but I'm not
sure how to go about the next steps into turning the points into a mesh and
thus interpolating.
Where can I input these python commands in paraview? I'm afraid my skills
in programming are minimal.
Thanks for your help,
- Mark
On Fri, Jan 23, 2015 at 4:24 PM, David E DeMarle <dave.demarle at kitware.com>
wrote:
> After you
>
> 1) get the list of points and values in the csv file:
> x,y,z,val1,val2,?
> 2) read into paraview and converted from a table to a vtkpointset as Alan
> suggested
> 3) try the vtkSurfaceReconstruction filter to convert it into a mesh.
> That isn't exposed in ParaView (maybe not parallel aware) so use this
> python programmable filter to do use it:
>
> import vtk
>
> pdi = self.GetPolyDataInput()
>
>
> subf1 = vtk.vtkSurfaceReconstructionFilter()
>
> subf1.SetInputData(pdi)
>
> subf2 = vtk.vtkContourFilter()
>
> subf2.SetInputConnection(subf1.GetOutputPort())
>
> subf2.SetValue(0, 0.0)
>
> subf2.Update()
>
>
> pdo = self.GetPolyDataOutput()
>
> pdo.ShallowCopy(subf2.GetOutput())
>
> ParaView will then happily interpolate values across the faces of the mesh
>
>
>
> David E DeMarle
> Kitware, Inc.
> R&D Engineer
> 21 Corporate Drive
> Clifton Park, NY 12065-8662
> Phone: 518-881-4909
>
> On Fri, Jan 23, 2015 at 3:51 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>
>> Mark,
>>
>> I don?t know the answer to your question, but a few years ago I wrote a
>> wiki page on converting .csv file data into points and structured grids.
>> The write-up is here: http://www.paraview.org/Wiki/Data_formats. Hope
>> that helps.
>>
>>
>>
>> Alan
>>
>>
>>
>> *From:* ParaView [mailto:paraview-bounces at paraview.org] *On Behalf Of *Mark
>> Belan
>> *Sent:* Thursday, January 22, 2015 9:50 AM
>> *To:* paraview at paraview.org
>> *Subject:* [EXTERNAL] [Paraview] Plotting data to an existing model's
>> surface
>>
>>
>>
>> Hello all,
>>
>> I'm a graduate student in geology trying to do some visual data work, but
>> I'm afraid my inexperience with paraview is making things a bit difficult
>> for me.
>>
>> Essentially what I'm trying to create is a 3D model of a rock that has
>> its surface coloured to show spatial distribution of a physical property
>> associated with certain areas on the rock.
>>
>> I was able to reproduce the rock I sample from using a 3D scanner but I
>> have no idea how to go about selecting particular areas of the rock's
>> surface, assigning a value to that "area", and having the program
>> interpolate between multiple "areas". Essentially I'd like this to produce
>> a color gradient showcasing the changing values.
>>
>> Can anyone offer some guidance/direction? I had someone at my campus
>> suggest creating a .csv file with x,y,z coordinates of the particular areas
>> of the model of interest, but after doing that all I've produced are
>> "points"...not sure how to specify the association to the model and color
>> and interpolation, etc.
>>
>> Thanks for any help,
>>
>> - Mark
>> --
>>
>> *Mark Belan*, B. Art Sc.
>> *M. Sc. Candidate - Astrobiology*
>>
>> *Lewis and Ruth Sherman Graduate Fellow*
>>
>> McMaster University
>>
>> School of Geography and Earth Sciences
>>
>> GSB 323
>> 1280 Main Street West
>> Hamilton, Ontario
>> Canada
>> L8S 4L8
>>
>> *Art*: www.markbelan.com
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>
--
*Mark Belan*, B. Art Sc.
*M. Sc. Candidate - Astrobiology*
*Lewis and Ruth Sherman Graduate Fellow*
McMaster University
School of Geography and Earth Sciences
GSB 323
1280 Main Street West
Hamilton, Ontario
Canada
L8S 4L8
*Art*: www.markbelan.com
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From dave.demarle at kitware.com Mon Jan 26 10:30:52 2015
From: dave.demarle at kitware.com (David E DeMarle)
Date: Mon, 26 Jan 2015 10:30:52 -0500
Subject: [Paraview] temporal threshold
In-Reply-To: <CAMYd9p9huV+qP58ScpEn1VOBAiG6hYDu6HOY+YJeN1OtGns59Q@mail.gmail.com>
References: <CAMYd9p-qVD57=RYMH5c1ih2FiW9P93ra0_=47pkFA2K_CQ1C_g@mail.gmail.com>
<CANjZAi8cOW-UZgWb0wz0HMVEwu8HxfrxJDpeBU631FMDyX0+Aw@mail.gmail.com>
<CAMYd9p9huV+qP58ScpEn1VOBAiG6hYDu6HOY+YJeN1OtGns59Q@mail.gmail.com>
Message-ID: <CANjZAi_5UxMbqQwGdHUcHNBkib3Wf9-hwXUATauycVCB=vytbg@mail.gmail.com>
Strange, when choosing the defaults on the Temporal Statistics filter the
output should be a copy of the input with each attribute array replaced
with name_stddev, name_average, name_maximum, and name_minimum arrays.
Try it on the Source->Time Source to see how it should behave.
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909
On Sun, Jan 25, 2015 at 10:28 PM, timcfagan . <timcfagan at gmail.com> wrote:
> Thanks, I've run the temporal statistics filter on my data, however it
> doesn't seem to be giving any data output. It spends a while calculating,
> but the output is just a solid color representation of my object. The
> information tab also shows no data.
>
> My input is an unstructured grid, with point data. Am I missing something?
>
> On Mon, Jan 26, 2015 at 1:13 AM, David E DeMarle <dave.demarle at kitware.com
> > wrote:
>
>> the temporal statistics filter will show you the max/min/avg etc over all
>> time. Threshold that to identify the nodes of interest.
>>
>> On Sunday, January 25, 2015, timcfagan . <timcfagan at gmail.com> wrote:
>>
>>> I'm trying to apply a threshold to a temporal data set. I would like to
>>> see which nodes reach a certain temperaturetry over the whole simulation.
>>> At the moment the threshold will only see one moment in time.
>>>
>>> Maybe there a way to apply a temporal threshold? Such that the filter
>>> will apply the scalar value for all timesteps?
>>>
>>
>>
>> --
>> David E DeMarle
>> Kitware, Inc.
>> R&D Engineer
>> 21 Corporate Drive
>> Clifton Park, NY 12065-8662
>> Phone: 518-881-4909
>>
>
>
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From utkarsh.ayachit at kitware.com Mon Jan 26 10:32:08 2015
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Mon, 26 Jan 2015 10:32:08 -0500
Subject: [Paraview] Fwd: Re: ANN: ParaView 4.3.1 is available for
download
In-Reply-To: <54C20AAC.9070601@mail.ru>
References: <54BF962A.3040903@mail.ru> <54BFA12E.7070103@mail.ru>
<CADHSJjB69CjELfJsdABoe_ptX9G+8nZNxNqkmpe3uS0ZMSaiHw@mail.gmail.com>
<54C20AAC.9070601@mail.ru>
Message-ID: <CADHSJjAMC8+-roc0M0jTB+_F7zNr2obR8ktb2Xq5zQGBFag=7w@mail.gmail.com>
Ah! Thanks, Gena. It must have fell through the cracks when we
refactored the settings infrastructure for 4.2. I've reported a bug:
http://www.paraview.org/Bug/view.php?id=15283
Utkarsh
On Fri, Jan 23, 2015 at 3:47 AM, Gena Bug <archaerolog at mail.ru> wrote:
>
>
> On 21.01.2015 17:44, Utkarsh Ayachit wrote:
>>
>> Gena,
>>
>>> a) can't permanently change camera settings (Edit->Settings->Camera) --
>>> default values restored after restart
>>
>>
>> If I am not mistaken, this was never supported, right? Mind adding a
>> feature request to the bug tracker so we don't forget about this?
>> Thanks.
>
> No, it's not right. I've just checked PV 4.1.0 and it saves its camera
> settings permanently.
>
>>
>>> b) it's really hard to work with advanced properties of Line Chart View
>>> -- for example simply add notation to an axis is difficult! It would be
>>> great to have separate window for such settings (as it was in previous
>>> releases, 4.1 and earlier).
>>
>>
>> That's doable. See Chapter 9, Section 9.2. Or this blog post [1]
>
> Thanks, that's better. Not so convenient as it was before but OK
>
>> [1] http://www.kitware.com/blog/home/post/673
>>
>> Utkarsh
>> .
>>
>
From dave.demarle at kitware.com Mon Jan 26 10:38:06 2015
From: dave.demarle at kitware.com (David E DeMarle)
Date: Mon, 26 Jan 2015 10:38:06 -0500
Subject: [Paraview] [EXTERNAL] Plotting data to an existing model's
surface
In-Reply-To: <CAFw8VoTAGhni6EOeNL77d6O3TekHmuu+w1ig2cdESVv4LU80RQ@mail.gmail.com>
References: <CAFw8VoR=PX2pEkq1D3T99brpzOjQ4WQ9+wLXAbG3rPQRNic1yA@mail.gmail.com>
<5f735f96ac0644ffac610a9b2c90c514@ES05AMSNLNT.srn.sandia.gov>
<CANjZAi_gTukgdj6vWuOedzHCVNO3sPYQW6DxySz5-ifZ3O9=HQ@mail.gmail.com>
<CAFw8VoTAGhni6EOeNL77d6O3TekHmuu+w1ig2cdESVv4LU80RQ@mail.gmail.com>
Message-ID: <CANjZAi_=+M8CWz5_NRAdq2W_rPAD69xUiQKn2+uBy0GMaB8GJw@mail.gmail.com>
Filters->Programmable Filter
Copy and paste the text into the Script entry field then hit Apply.
vtkSurfaceReconstruction doesn't have the concave shape limitation that
Delaunay has - but it isn't a perfect mesh of the surface either. Perhaps
the vtk or paraview mailing lists contain a better alternative to either.
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909
On Mon, Jan 26, 2015 at 10:14 AM, Mark Belan <belanma at mcmaster.ca> wrote:
> Hi David,
>
> Thanks for your suggestion. I was able to successfully render my points in
> a .csv file into specific points on the model (thanks Alan!), but I'm not
> sure how to go about the next steps into turning the points into a mesh and
> thus interpolating.
>
> Where can I input these python commands in paraview? I'm afraid my skills
> in programming are minimal.
>
> Thanks for your help,
>
> - Mark
>
> On Fri, Jan 23, 2015 at 4:24 PM, David E DeMarle <dave.demarle at kitware.com
> > wrote:
>
>> After you
>>
>> 1) get the list of points and values in the csv file:
>> x,y,z,val1,val2,?
>> 2) read into paraview and converted from a table to a vtkpointset as Alan
>> suggested
>> 3) try the vtkSurfaceReconstruction filter to convert it into a mesh.
>> That isn't exposed in ParaView (maybe not parallel aware) so use this
>> python programmable filter to do use it:
>>
>> import vtk
>>
>> pdi = self.GetPolyDataInput()
>>
>>
>> subf1 = vtk.vtkSurfaceReconstructionFilter()
>>
>> subf1.SetInputData(pdi)
>>
>> subf2 = vtk.vtkContourFilter()
>>
>> subf2.SetInputConnection(subf1.GetOutputPort())
>>
>> subf2.SetValue(0, 0.0)
>>
>> subf2.Update()
>>
>>
>> pdo = self.GetPolyDataOutput()
>>
>> pdo.ShallowCopy(subf2.GetOutput())
>>
>> ParaView will then happily interpolate values across the faces of the mesh
>>
>>
>>
>> David E DeMarle
>> Kitware, Inc.
>> R&D Engineer
>> 21 Corporate Drive
>> Clifton Park, NY 12065-8662
>> Phone: 518-881-4909
>>
>> On Fri, Jan 23, 2015 at 3:51 PM, Scott, W Alan <wascott at sandia.gov>
>> wrote:
>>
>>> Mark,
>>>
>>> I don?t know the answer to your question, but a few years ago I wrote a
>>> wiki page on converting .csv file data into points and structured grids.
>>> The write-up is here: http://www.paraview.org/Wiki/Data_formats. Hope
>>> that helps.
>>>
>>>
>>>
>>> Alan
>>>
>>>
>>>
>>> *From:* ParaView [mailto:paraview-bounces at paraview.org] *On Behalf Of *Mark
>>> Belan
>>> *Sent:* Thursday, January 22, 2015 9:50 AM
>>> *To:* paraview at paraview.org
>>> *Subject:* [EXTERNAL] [Paraview] Plotting data to an existing model's
>>> surface
>>>
>>>
>>>
>>> Hello all,
>>>
>>> I'm a graduate student in geology trying to do some visual data work,
>>> but I'm afraid my inexperience with paraview is making things a bit
>>> difficult for me.
>>>
>>> Essentially what I'm trying to create is a 3D model of a rock that has
>>> its surface coloured to show spatial distribution of a physical property
>>> associated with certain areas on the rock.
>>>
>>> I was able to reproduce the rock I sample from using a 3D scanner but I
>>> have no idea how to go about selecting particular areas of the rock's
>>> surface, assigning a value to that "area", and having the program
>>> interpolate between multiple "areas". Essentially I'd like this to produce
>>> a color gradient showcasing the changing values.
>>>
>>> Can anyone offer some guidance/direction? I had someone at my campus
>>> suggest creating a .csv file with x,y,z coordinates of the particular areas
>>> of the model of interest, but after doing that all I've produced are
>>> "points"...not sure how to specify the association to the model and color
>>> and interpolation, etc.
>>>
>>> Thanks for any help,
>>>
>>> - Mark
>>> --
>>>
>>> *Mark Belan*, B. Art Sc.
>>> *M. Sc. Candidate - Astrobiology*
>>>
>>> *Lewis and Ruth Sherman Graduate Fellow*
>>>
>>> McMaster University
>>>
>>> School of Geography and Earth Sciences
>>>
>>> GSB 323
>>> 1280 Main Street West
>>> Hamilton, Ontario
>>> Canada
>>> L8S 4L8
>>>
>>> *Art*: www.markbelan.com
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>>>
>>
>
>
> --
> *Mark Belan*, B. Art Sc.
> *M. Sc. Candidate - Astrobiology*
> *Lewis and Ruth Sherman Graduate Fellow*
> McMaster University
> School of Geography and Earth Sciences
> GSB 323
> 1280 Main Street West
> Hamilton, Ontario
> Canada
> L8S 4L8
>
> *Art*: www.markbelan.com
>
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From Christophe.Dang at sidel.com Mon Jan 26 10:30:58 2015
From: Christophe.Dang at sidel.com (Dang, Christophe)
Date: Mon, 26 Jan 2015 15:30:58 +0000
Subject: [Paraview] [EXTERNAL] Plotting data to an existing
model's surface
In-Reply-To: <CAFw8VoTAGhni6EOeNL77d6O3TekHmuu+w1ig2cdESVv4LU80RQ@mail.gmail.com>
References: <CAFw8VoR=PX2pEkq1D3T99brpzOjQ4WQ9+wLXAbG3rPQRNic1yA@mail.gmail.com>
<5f735f96ac0644ffac610a9b2c90c514@ES05AMSNLNT.srn.sandia.gov>
<CANjZAi_gTukgdj6vWuOedzHCVNO3sPYQW6DxySz5-ifZ3O9=HQ@mail.gmail.com>
<CAFw8VoTAGhni6EOeNL77d6O3TekHmuu+w1ig2cdESVv4LU80RQ@mail.gmail.com>
Message-ID: <AMSPR07MB20999208D7F0AD8A176387EE5350@AMSPR07MB209.eurprd07.prod.outlook.com>
Hello,
> De : Mark Belan
> Envoy? : lundi 26 janvier 2015 16:15
>
> [.csv file with x,y,z coordinates and scalar values]
>
> but I'm not sure how to go about the next steps into turning the points into a mesh and thus interpolating.
After using the Table To Points filter, you can use the Delaunay 3D filter that creates a tetrahedral meshing.
I guess you work with a convex portion of space, so this should induce problems.
HTH
--
Christophe Dang Ngoc Chan
Mechanical calculation engineer
This e-mail may contain confidential and/or privileged information. If you are not the intended recipient (or have received this e-mail in error), please notify the sender immediately and destroy this e-mail. Any unauthorized copying, disclosure or distribution of the material in this e-mail is strictly forbidden.
From pnav at tacc.utexas.edu Mon Jan 26 11:14:22 2015
From: pnav at tacc.utexas.edu (Paul Navratil)
Date: Mon, 26 Jan 2015 16:14:22 +0000
Subject: [Paraview] EGPGV 2015 Call for Papers and Visualization Showcase
Message-ID: <B93AB4DE-D6D7-4152-8458-339F58C69E99@tacc.utexas.edu>
Hello ParaView Users,
Please excuse the shameless plug, but I would like to remind everyone that the EGPGV full paper submission deadline is three weeks away.
If you have developed parallel techniques to perform your visualization, we invite your submission!
Please note that we also are featuring a new Visualization Showcase short papers track for state-of-the-art application of visualization techniques to interesting problems.
The deadline for this track is the end of February, so there is more time to get the video and short paper in perfect shape :-)
All best,
Paul Navratil
Texas Advanced Computing Center
=================================================================
E G P G V 2015
Eurographics Symposium on Parallel Graphics and Visualization
25 - 26 May, Cagliari, Sardinia, Italy
*** EGPGV 2015 - Call for Papers ***
Welcome to the 15th EGPGV, the Eurographics Symposium on
Parallel Graphics and Visualization. The event will take place
on May 25 - 26 in Cagliari, island of Sardinia, Italy.
The Symposium will be held in conjunction with EuroVis 2015.
*** NOTE: there are two tracks for this year?s symposium, full papers
and visualization showcase short papers ***
The importance of parallel computing is increasing rapidly with the
ubiquitous availability of multi-core CPUs, GPUs, and cluster systems.
Computationally demanding and data-intensive applications in graphics
and visualization are strongly affected by this trend and require novel
efficient parallel solutions. The aim of this symposium is to foster the
exchange of experiences and knowledge exploiting and defining new trends
in parallel graphics and visualization.
The proceedings of the EGPGV Symposium will be published in the
Eurographics Proceedings Series and in the Eurographics Digital Library.
Focusing on parallel computing, the symposium seeks papers on graphics
and visualization techniques, data structures, algorithms, and systems for:
* large-data
* clusters
* (multi-)GPU computing, and heterogeneous, hybrid architectures
* out-of-core
* hybrid distributed and shared memory architectures
* grid and cloud environments
In particular the symposium topics include:
* computationally and data intensive rendering
* scientific visualization (volume rendering, flow and tensor
visualization)
* information visualization and visual analytics
* simulations for virtual environments (physics-based animation,
collision detection, acoustic)
* mesh processing, level-of-detail, and geometric methods
* visual computing (image- and video-based rendering, image processing
and exploitation, segmentation)
* scheduling, memory management and data coherence
* large and high resolution displays, virtual environments
* scientific, engineering, and industrial applications
Full papers are expected to be eight to ten (8-10) pages in length, with
the final length appropriate to the contribution of the paper. Papers
should be submitted using the Eurographics Conference style
<https://srmv2.eg.org/COMFy/Conference/PGV_2015/GetConferenceFile?fileID=6146> (https://srmv2.eg.org/COMFy/Conference/PGV_2015/GetConferenceFile?fileID=6146).
Please use this linked version, which contains the correct details for
EGPGV.
The expected schedule is as follows:
* Full Paper Due: February 13, 2014
* Author Notification: March 27, 2014
* Camera-Ready Paper Due: April 8, 2014
The best paper will be invited to submit an extended version to IEEE
Transactions on Visualization and Computer Graphics (TVCG).
Scientific Visualization Showcase
This year we present a new track for EGPGV 2015, which provides a forum
for the year's most instrumental movies in parallel graphics and
visualization. Finalists will compete for the Best Visualization Award,
and each finalist will present his or her movie during a dedicated
session at EGPGV ?15 in a 10-minute presentation. Movies are judged
based on how their movie illuminates science, by the quality of the
movie, and for innovations in the process used for creating the movie.
The accepted submissions will appear as short papers in the symposium
proceedings.
Review and selection process:
Submission should include ?Visualization Showcase:? at the beginning of
the paper title. Submissions needed to include a movie (up to 150MB in
size) and a short paper (up to 4 pages including references). The short
paper should describe the scientific story conveyed by the movie, how
the visualization helps scientific discovery, and the
"state-of-the-practice" information behind making the movie. The short
paper should be submitted using the Eurographics Conference style
<https://srmv2.eg.org/COMFy/Conference/PGV_2015/GetConferenceFile?fileID=6146> (https://srmv2.eg.org/COMFy/Conference/PGV_2015/GetConferenceFile?fileID=6146).
Please use this linked version, which contains the correct details for
EGPGV.
Each submission will be peer reviewed by the EGPGV Paper Chairs.
Criteria for revision include:
1. Compelling visualization
2. Visualizing data involving parallel graphics and/or visualization in
a significant way (e.g., data size, parallel processing, parallel
rendering)
3. Meaningful and compelling science story
4. Description of visualization techniques necessary to accomplish the
movie
The expected schedule is as follows:
* Showcase Submission Due: February 28, 2014
* Author Notification: March 27, 2014
* Camera-Ready Paper Due: April 8, 2014
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From matt.mccormick at kitware.com Mon Jan 26 11:54:53 2015
From: matt.mccormick at kitware.com (Matt McCormick)
Date: Mon, 26 Jan 2015 11:54:53 -0500
Subject: [Paraview] [ITK-users] compile itk (VTKGlue ON) with vtk from
paraview
In-Reply-To: <54C6029C.4040600@mh-hannover.de>
References: <54C0CF2E.3060106@mh-hannover.de> <54C2125D.7090801@mh-hannover.de>
<CALzTN-SJcZYJT+twE_fXXWi7tyTe6u9JhFSGy1W03-C9PU-=LA@mail.gmail.com>
<54C6029C.4040600@mh-hannover.de>
Message-ID: <CALzTN-S8KLZcp30bLkdNEpTK8zR3L3xT6D--XhmF5JVjKngz6A@mail.gmail.com>
Hi Roman,
Thanks for the update. Great to hear about the Midas Journal article!
I do not think the Midas Journal will be able to build your plugin.
I would recommend creating build instructions to build against a
ParaView build tree. I have just verified that ITK builds with the
ITKVtkGlue module ON when pointing VTK_DIR to the <ParaView-build>/VTK
directory.
I don't see the install tree VTKTargets.cmake file in my ParaView
build, either. In the long term, the ParaView CMake configuration
should be corrected.
HTH,
Matt
On Mon, Jan 26, 2015 at 4:02 AM, Dr. Roman Grothausmann
<grothausmann.roman at mh-hannover.de> wrote:
> Hi Matt,
>
>
> Thank You very much for Your reply.
> I can only find one VTKTargets.cmake in
> /opt/compilation/paraview-git_build/VTK/
> It seems though that it is lacking the relevant entries for the libraries
> that troubled me, e.g. vtkPVPythonCatalyst and
> vtkUtilitiesPythonInitializer.
>
> I'm about to publish the ITK-VTK PV plugin in the Midas Journal, what
> installation instructions should I give there?
> Will the testing environment be able to compile this plugin and its tests or
> should I disable automatic testing for this contribution?
>
> Many thanks for looking into this.
> Roman
>
>
> On 23/01/15 18:15, Matt McCormick wrote:
>>
>> Hi Roman,
>>
>> Thanks for looking into the issue and reporting it to the mailing list.
>>
>> Paraview should be installing VTKTargets.cmake, which tells the build
>> system where to find the libraries. Note that there might be two
>> VTKTargets.cmake files that are generated -- one for the build tree
>> and one for the install tree.
>>
>> HTH,
>> Matt
>>
>> On Fri, Jan 23, 2015 at 4:20 AM, Dr. Roman Grothausmann
>> <grothausmann.roman at mh-hannover.de> wrote:
>>>
>>>
>>> On 22/01/15 11:21, Dr. Roman Grothausmann wrote:
>>>>
>>>>
>>>> Adding the abs. file locations to the build command does not help nor
>>>> does
>>>> -L/opt/paraview-4.3.1_git/lib/paraview-4.3/
>>>
>>>
>>>
>>> I figured that the vtk dynamic libraries of PV have the ending *-pv4.3.so
>>> which seems to be the reason why the linker does not find them. If I
>>> create
>>> symbolic links to these files without the extension:
>>>
>>> cd /opt/compilation/paraview-git_build/lib/
>>> for i in *-pv*.so; do ln -s $i ${i%-pv*}.so; done
>>>
>>> and adding -L/opt/compilation/paraview-git_build/lib/ to CMAKE_CXX_FLAGS
>>> the compilation of ITK succeeds.
>>>
>>> I wonder, is that the way it's meant to be done?
>>>
>>>
>>>
>>>> What am I missing in my configuration of PV and ITK?
>>>>
>>>> When and where should I specify:
>>>> CMAKE_CXX_FLAGS -fPIC
>>>> BUILD_SHARED_LIBS ON/OFF
>>>>
>>>> Is this the right VTK_DIR specification for ITK:
>>>> /opt/compilation/ParaView-v4.3.1/build/VTK
>>>> or
>>>> /opt/paraview-4.3.1_git/lib/cmake/paraview-4.3
>>>>
>>>>
>>>>
>>>> Many thanks for any help or hints.
>>>> Roman
>>>>
>>>>
>>>
>>> --
>>> Dr. Roman Grothausmann
>>>
>>> Tomographie und Digitale Bildverarbeitung
>>> Tomography and Digital Image Analysis
>>>
>>> Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
>>> Medizinische Hochschule Hannover
>>> Carl-Neuberg-Str. 1
>>> D-30625 Hannover
>>>
>>> Tel. +49 511 532-9574
>>> _____________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Kitware offers ITK Training Courses, for more information visit:
>>> http://www.kitware.com/products/protraining.php
>>>
>>> Please keep messages on-topic and check the ITK FAQ at:
>>> http://www.itk.org/Wiki/ITK_FAQ
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/insight-users
>
>
> --
> Dr. Roman Grothausmann
>
> Tomographie und Digitale Bildverarbeitung
> Tomography and Digital Image Analysis
>
> Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
> Medizinische Hochschule Hannover
> Carl-Neuberg-Str. 1
> D-30625 Hannover
>
> Tel. +49 511 532-9574
From matt.mccormick at kitware.com Mon Jan 26 12:03:33 2015
From: matt.mccormick at kitware.com (Matt McCormick)
Date: Mon, 26 Jan 2015 12:03:33 -0500
Subject: [Paraview] [ITK-users] compile itk (VTKGlue ON) with vtk from
paraview
In-Reply-To: <CALzTN-S8KLZcp30bLkdNEpTK8zR3L3xT6D--XhmF5JVjKngz6A@mail.gmail.com>
References: <54C0CF2E.3060106@mh-hannover.de> <54C2125D.7090801@mh-hannover.de>
<CALzTN-SJcZYJT+twE_fXXWi7tyTe6u9JhFSGy1W03-C9PU-=LA@mail.gmail.com>
<54C6029C.4040600@mh-hannover.de>
<CALzTN-S8KLZcp30bLkdNEpTK8zR3L3xT6D--XhmF5JVjKngz6A@mail.gmail.com>
Message-ID: <CALzTN-Tqa2ink0bPf8a0aVP-5jyUZsijUuXBNTRD4Qim6bcmBQ@mail.gmail.com>
PS. Another option is to compile / install VTK separately outside of
ParaView. This may be a better approach.
It is a little tricky to configure ParaView in this way. See:
http://www.paraview.org/gitweb?p=ParaView.git;a=blob;f=CMakeLists.txt;h=d80ff535090edc1fa9520d39aa66d269fc1db8b3;hb=HEAD#l516
On Mon, Jan 26, 2015 at 11:54 AM, Matt McCormick
<matt.mccormick at kitware.com> wrote:
> Hi Roman,
>
> Thanks for the update. Great to hear about the Midas Journal article!
>
> I do not think the Midas Journal will be able to build your plugin.
>
> I would recommend creating build instructions to build against a
> ParaView build tree. I have just verified that ITK builds with the
> ITKVtkGlue module ON when pointing VTK_DIR to the <ParaView-build>/VTK
> directory.
>
> I don't see the install tree VTKTargets.cmake file in my ParaView
> build, either. In the long term, the ParaView CMake configuration
> should be corrected.
>
> HTH,
> Matt
>
> On Mon, Jan 26, 2015 at 4:02 AM, Dr. Roman Grothausmann
> <grothausmann.roman at mh-hannover.de> wrote:
>> Hi Matt,
>>
>>
>> Thank You very much for Your reply.
>> I can only find one VTKTargets.cmake in
>> /opt/compilation/paraview-git_build/VTK/
>> It seems though that it is lacking the relevant entries for the libraries
>> that troubled me, e.g. vtkPVPythonCatalyst and
>> vtkUtilitiesPythonInitializer.
>>
>> I'm about to publish the ITK-VTK PV plugin in the Midas Journal, what
>> installation instructions should I give there?
>> Will the testing environment be able to compile this plugin and its tests or
>> should I disable automatic testing for this contribution?
>>
>> Many thanks for looking into this.
>> Roman
>>
>>
>> On 23/01/15 18:15, Matt McCormick wrote:
>>>
>>> Hi Roman,
>>>
>>> Thanks for looking into the issue and reporting it to the mailing list.
>>>
>>> Paraview should be installing VTKTargets.cmake, which tells the build
>>> system where to find the libraries. Note that there might be two
>>> VTKTargets.cmake files that are generated -- one for the build tree
>>> and one for the install tree.
>>>
>>> HTH,
>>> Matt
>>>
>>> On Fri, Jan 23, 2015 at 4:20 AM, Dr. Roman Grothausmann
>>> <grothausmann.roman at mh-hannover.de> wrote:
>>>>
>>>>
>>>> On 22/01/15 11:21, Dr. Roman Grothausmann wrote:
>>>>>
>>>>>
>>>>> Adding the abs. file locations to the build command does not help nor
>>>>> does
>>>>> -L/opt/paraview-4.3.1_git/lib/paraview-4.3/
>>>>
>>>>
>>>>
>>>> I figured that the vtk dynamic libraries of PV have the ending *-pv4.3.so
>>>> which seems to be the reason why the linker does not find them. If I
>>>> create
>>>> symbolic links to these files without the extension:
>>>>
>>>> cd /opt/compilation/paraview-git_build/lib/
>>>> for i in *-pv*.so; do ln -s $i ${i%-pv*}.so; done
>>>>
>>>> and adding -L/opt/compilation/paraview-git_build/lib/ to CMAKE_CXX_FLAGS
>>>> the compilation of ITK succeeds.
>>>>
>>>> I wonder, is that the way it's meant to be done?
>>>>
>>>>
>>>>
>>>>> What am I missing in my configuration of PV and ITK?
>>>>>
>>>>> When and where should I specify:
>>>>> CMAKE_CXX_FLAGS -fPIC
>>>>> BUILD_SHARED_LIBS ON/OFF
>>>>>
>>>>> Is this the right VTK_DIR specification for ITK:
>>>>> /opt/compilation/ParaView-v4.3.1/build/VTK
>>>>> or
>>>>> /opt/paraview-4.3.1_git/lib/cmake/paraview-4.3
>>>>>
>>>>>
>>>>>
>>>>> Many thanks for any help or hints.
>>>>> Roman
>>>>>
>>>>>
>>>>
>>>> --
>>>> Dr. Roman Grothausmann
>>>>
>>>> Tomographie und Digitale Bildverarbeitung
>>>> Tomography and Digital Image Analysis
>>>>
>>>> Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
>>>> Medizinische Hochschule Hannover
>>>> Carl-Neuberg-Str. 1
>>>> D-30625 Hannover
>>>>
>>>> Tel. +49 511 532-9574
>>>> _____________________________________
>>>> Powered by www.kitware.com
>>>>
>>>> Visit other Kitware open-source projects at
>>>> http://www.kitware.com/opensource/opensource.html
>>>>
>>>> Kitware offers ITK Training Courses, for more information visit:
>>>> http://www.kitware.com/products/protraining.php
>>>>
>>>> Please keep messages on-topic and check the ITK FAQ at:
>>>> http://www.itk.org/Wiki/ITK_FAQ
>>>>
>>>> Follow this link to subscribe/unsubscribe:
>>>> http://public.kitware.com/mailman/listinfo/insight-users
>>
>>
>> --
>> Dr. Roman Grothausmann
>>
>> Tomographie und Digitale Bildverarbeitung
>> Tomography and Digital Image Analysis
>>
>> Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
>> Medizinische Hochschule Hannover
>> Carl-Neuberg-Str. 1
>> D-30625 Hannover
>>
>> Tel. +49 511 532-9574
From wascott at sandia.gov Mon Jan 26 13:00:13 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Mon, 26 Jan 2015 18:00:13 +0000
Subject: [Paraview] [EXTERNAL] Re: temporal threshold
In-Reply-To: <CANjZAi_5UxMbqQwGdHUcHNBkib3Wf9-hwXUATauycVCB=vytbg@mail.gmail.com>
References: <CAMYd9p-qVD57=RYMH5c1ih2FiW9P93ra0_=47pkFA2K_CQ1C_g@mail.gmail.com>
<CANjZAi8cOW-UZgWb0wz0HMVEwu8HxfrxJDpeBU631FMDyX0+Aw@mail.gmail.com>
<CAMYd9p9huV+qP58ScpEn1VOBAiG6hYDu6HOY+YJeN1OtGns59Q@mail.gmail.com>
<CANjZAi_5UxMbqQwGdHUcHNBkib3Wf9-hwXUATauycVCB=vytbg@mail.gmail.com>
Message-ID: <f4162a7a498c4b28b4fa79cbdde52648@ES05AMSNLNT.srn.sandia.gov>
Dave,
Not related to Tim?s issue below, but ? if I remember correctly ? the temporal statistics filter does not work in parallel.
Alan
From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of David E DeMarle
Sent: Monday, January 26, 2015 8:31 AM
To: timcfagan .
Cc: paraview at paraview.org
Subject: [EXTERNAL] Re: [Paraview] temporal threshold
Strange, when choosing the defaults on the Temporal Statistics filter the output should be a copy of the input with each attribute array replaced with name_stddev, name_average, name_maximum, and name_minimum arrays.
Try it on the Source->Time Source to see how it should behave.
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909<tel:518-881-4909>
On Sun, Jan 25, 2015 at 10:28 PM, timcfagan . <timcfagan at gmail.com<mailto:timcfagan at gmail.com>> wrote:
Thanks, I've run the temporal statistics filter on my data, however it doesn't seem to be giving any data output. It spends a while calculating, but the output is just a solid color representation of my object. The information tab also shows no data.
My input is an unstructured grid, with point data. Am I missing something?
On Mon, Jan 26, 2015 at 1:13 AM, David E DeMarle <dave.demarle at kitware.com<mailto:dave.demarle at kitware.com>> wrote:
the temporal statistics filter will show you the max/min/avg etc over all time. Threshold that to identify the nodes of interest.
On Sunday, January 25, 2015, timcfagan . <timcfagan at gmail.com<mailto:timcfagan at gmail.com>> wrote:
I'm trying to apply a threshold to a temporal data set. I would like to see which nodes reach a certain temperaturetry over the whole simulation. At the moment the threshold will only see one moment in time.
Maybe there a way to apply a temporal threshold? Such that the filter will apply the scalar value for all timesteps?
--
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909<tel:518-881-4909>
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From kmorel at sandia.gov Mon Jan 26 13:05:33 2015
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Mon, 26 Jan 2015 18:05:33 +0000
Subject: [Paraview] [EXTERNAL] Re: temporal threshold
In-Reply-To: <f4162a7a498c4b28b4fa79cbdde52648@ES05AMSNLNT.srn.sandia.gov>
References: <CAMYd9p-qVD57=RYMH5c1ih2FiW9P93ra0_=47pkFA2K_CQ1C_g@mail.gmail.com>
<CANjZAi8cOW-UZgWb0wz0HMVEwu8HxfrxJDpeBU631FMDyX0+Aw@mail.gmail.com>
<CAMYd9p9huV+qP58ScpEn1VOBAiG6hYDu6HOY+YJeN1OtGns59Q@mail.gmail.com>
<CANjZAi_5UxMbqQwGdHUcHNBkib3Wf9-hwXUATauycVCB=vytbg@mail.gmail.com>
<f4162a7a498c4b28b4fa79cbdde52648@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <D0EBCFD4.20199%kmorel@sandia.gov>
It doesn't? I thought it worked in parallel but didn't work if the topology changed.
-Ken
From: <Scott>, Walter Scott <wascott at sandia.gov<mailto:wascott at sandia.gov>>
Date: Monday, January 26, 2015 at 11:00 AM
To: David E DeMarle <dave.demarle at kitware.com<mailto:dave.demarle at kitware.com>>, "timcfagan ." <timcfagan at gmail.com<mailto:timcfagan at gmail.com>>
Cc: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: Re: [Paraview] [EXTERNAL] Re: temporal threshold
Dave,
Not related to Tim's issue below, but - if I remember correctly - the temporal statistics filter does not work in parallel.
Alan
From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of David E DeMarle
Sent: Monday, January 26, 2015 8:31 AM
To: timcfagan .
Cc: paraview at paraview.org<mailto:paraview at paraview.org>
Subject: [EXTERNAL] Re: [Paraview] temporal threshold
Strange, when choosing the defaults on the Temporal Statistics filter the output should be a copy of the input with each attribute array replaced with name_stddev, name_average, name_maximum, and name_minimum arrays.
Try it on the Source->Time Source to see how it should behave.
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909<tel:518-881-4909>
On Sun, Jan 25, 2015 at 10:28 PM, timcfagan . <timcfagan at gmail.com<mailto:timcfagan at gmail.com>> wrote:
Thanks, I've run the temporal statistics filter on my data, however it doesn't seem to be giving any data output. It spends a while calculating, but the output is just a solid color representation of my object. The information tab also shows no data.
My input is an unstructured grid, with point data. Am I missing something?
On Mon, Jan 26, 2015 at 1:13 AM, David E DeMarle <dave.demarle at kitware.com<mailto:dave.demarle at kitware.com>> wrote:
the temporal statistics filter will show you the max/min/avg etc over all time. Threshold that to identify the nodes of interest.
On Sunday, January 25, 2015, timcfagan . <timcfagan at gmail.com<mailto:timcfagan at gmail.com>> wrote:
I'm trying to apply a threshold to a temporal data set. I would like to see which nodes reach a certain temperaturetry over the whole simulation. At the moment the threshold will only see one moment in time.
Maybe there a way to apply a temporal threshold? Such that the filter will apply the scalar value for all timesteps?
--
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909<tel:518-881-4909>
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From wascott at sandia.gov Mon Jan 26 13:09:10 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Mon, 26 Jan 2015 18:09:10 +0000
Subject: [Paraview] [EXTERNAL] Re: temporal threshold
In-Reply-To: <D0EBCFD4.20199%kmorel@sandia.gov>
References: <CAMYd9p-qVD57=RYMH5c1ih2FiW9P93ra0_=47pkFA2K_CQ1C_g@mail.gmail.com>
<CANjZAi8cOW-UZgWb0wz0HMVEwu8HxfrxJDpeBU631FMDyX0+Aw@mail.gmail.com>
<CAMYd9p9huV+qP58ScpEn1VOBAiG6hYDu6HOY+YJeN1OtGns59Q@mail.gmail.com>
<CANjZAi_5UxMbqQwGdHUcHNBkib3Wf9-hwXUATauycVCB=vytbg@mail.gmail.com>
<f4162a7a498c4b28b4fa79cbdde52648@ES05AMSNLNT.srn.sandia.gov>
<D0EBCFD4.20199%kmorel@sandia.gov>
Message-ID: <90958babad074fbcb8224257ceffbf95@ES05AMSNLNT.srn.sandia.gov>
You may be right. I am just dredging up old memories from a few years ago. David Thompson should remember - he helped write the filter. David?
Alan
From: Moreland, Kenneth
Sent: Monday, January 26, 2015 11:06 AM
To: Scott, W Alan; David E DeMarle; timcfagan .
Cc: paraview at paraview.org
Subject: Re: [Paraview] [EXTERNAL] Re: temporal threshold
It doesn't? I thought it worked in parallel but didn't work if the topology changed.
-Ken
From: <Scott>, Walter Scott <wascott at sandia.gov<mailto:wascott at sandia.gov>>
Date: Monday, January 26, 2015 at 11:00 AM
To: David E DeMarle <dave.demarle at kitware.com<mailto:dave.demarle at kitware.com>>, "timcfagan ." <timcfagan at gmail.com<mailto:timcfagan at gmail.com>>
Cc: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: Re: [Paraview] [EXTERNAL] Re: temporal threshold
Dave,
Not related to Tim's issue below, but - if I remember correctly - the temporal statistics filter does not work in parallel.
Alan
From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of David E DeMarle
Sent: Monday, January 26, 2015 8:31 AM
To: timcfagan .
Cc: paraview at paraview.org<mailto:paraview at paraview.org>
Subject: [EXTERNAL] Re: [Paraview] temporal threshold
Strange, when choosing the defaults on the Temporal Statistics filter the output should be a copy of the input with each attribute array replaced with name_stddev, name_average, name_maximum, and name_minimum arrays.
Try it on the Source->Time Source to see how it should behave.
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909<tel:518-881-4909>
On Sun, Jan 25, 2015 at 10:28 PM, timcfagan . <timcfagan at gmail.com<mailto:timcfagan at gmail.com>> wrote:
Thanks, I've run the temporal statistics filter on my data, however it doesn't seem to be giving any data output. It spends a while calculating, but the output is just a solid color representation of my object. The information tab also shows no data.
My input is an unstructured grid, with point data. Am I missing something?
On Mon, Jan 26, 2015 at 1:13 AM, David E DeMarle <dave.demarle at kitware.com<mailto:dave.demarle at kitware.com>> wrote:
the temporal statistics filter will show you the max/min/avg etc over all time. Threshold that to identify the nodes of interest.
On Sunday, January 25, 2015, timcfagan . <timcfagan at gmail.com<mailto:timcfagan at gmail.com>> wrote:
I'm trying to apply a threshold to a temporal data set. I would like to see which nodes reach a certain temperaturetry over the whole simulation. At the moment the threshold will only see one moment in time.
Maybe there a way to apply a temporal threshold? Such that the filter will apply the scalar value for all timesteps?
--
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909<tel:518-881-4909>
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From kmorel at sandia.gov Mon Jan 26 13:13:08 2015
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Mon, 26 Jan 2015 18:13:08 +0000
Subject: [Paraview] [EXTERNAL] Re: temporal threshold
In-Reply-To: <90958babad074fbcb8224257ceffbf95@ES05AMSNLNT.srn.sandia.gov>
References: <CAMYd9p-qVD57=RYMH5c1ih2FiW9P93ra0_=47pkFA2K_CQ1C_g@mail.gmail.com>
<CANjZAi8cOW-UZgWb0wz0HMVEwu8HxfrxJDpeBU631FMDyX0+Aw@mail.gmail.com>
<CAMYd9p9huV+qP58ScpEn1VOBAiG6hYDu6HOY+YJeN1OtGns59Q@mail.gmail.com>
<CANjZAi_5UxMbqQwGdHUcHNBkib3Wf9-hwXUATauycVCB=vytbg@mail.gmail.com>
<f4162a7a498c4b28b4fa79cbdde52648@ES05AMSNLNT.srn.sandia.gov>
<D0EBCFD4.20199%kmorel@sandia.gov>
<90958babad074fbcb8224257ceffbf95@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <D0EBD143.2019E%kmorel@sandia.gov>
Actually, I wrote Temporal Statistics filter. David T. co-wrote the descriptive statistics and host of other statistics filters that I believe operate on a single time slice. I also believe they all work in parallel except there is an issue with replicated points in parallel data that has never been resolved.
-Ken
From: <Scott>, Walter Scott <wascott at sandia.gov<mailto:wascott at sandia.gov>>
Date: Monday, January 26, 2015 at 11:09 AM
To: Kenneth Moreland <kmorel at sandia.gov<mailto:kmorel at sandia.gov>>, David E DeMarle <dave.demarle at kitware.com<mailto:dave.demarle at kitware.com>>, "timcfagan ." <timcfagan at gmail.com<mailto:timcfagan at gmail.com>>
Cc: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: RE: [Paraview] [EXTERNAL] Re: temporal threshold
You may be right. I am just dredging up old memories from a few years ago. David Thompson should remember - he helped write the filter. David?
Alan
From: Moreland, Kenneth
Sent: Monday, January 26, 2015 11:06 AM
To: Scott, W Alan; David E DeMarle; timcfagan .
Cc: paraview at paraview.org<mailto:paraview at paraview.org>
Subject: Re: [Paraview] [EXTERNAL] Re: temporal threshold
It doesn't? I thought it worked in parallel but didn't work if the topology changed.
-Ken
From: <Scott>, Walter Scott <wascott at sandia.gov<mailto:wascott at sandia.gov>>
Date: Monday, January 26, 2015 at 11:00 AM
To: David E DeMarle <dave.demarle at kitware.com<mailto:dave.demarle at kitware.com>>, "timcfagan ." <timcfagan at gmail.com<mailto:timcfagan at gmail.com>>
Cc: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: Re: [Paraview] [EXTERNAL] Re: temporal threshold
Dave,
Not related to Tim's issue below, but - if I remember correctly - the temporal statistics filter does not work in parallel.
Alan
From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of David E DeMarle
Sent: Monday, January 26, 2015 8:31 AM
To: timcfagan .
Cc: paraview at paraview.org<mailto:paraview at paraview.org>
Subject: [EXTERNAL] Re: [Paraview] temporal threshold
Strange, when choosing the defaults on the Temporal Statistics filter the output should be a copy of the input with each attribute array replaced with name_stddev, name_average, name_maximum, and name_minimum arrays.
Try it on the Source->Time Source to see how it should behave.
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909<tel:518-881-4909>
On Sun, Jan 25, 2015 at 10:28 PM, timcfagan . <timcfagan at gmail.com<mailto:timcfagan at gmail.com>> wrote:
Thanks, I've run the temporal statistics filter on my data, however it doesn't seem to be giving any data output. It spends a while calculating, but the output is just a solid color representation of my object. The information tab also shows no data.
My input is an unstructured grid, with point data. Am I missing something?
On Mon, Jan 26, 2015 at 1:13 AM, David E DeMarle <dave.demarle at kitware.com<mailto:dave.demarle at kitware.com>> wrote:
the temporal statistics filter will show you the max/min/avg etc over all time. Threshold that to identify the nodes of interest.
On Sunday, January 25, 2015, timcfagan . <timcfagan at gmail.com<mailto:timcfagan at gmail.com>> wrote:
I'm trying to apply a threshold to a temporal data set. I would like to see which nodes reach a certain temperaturetry over the whole simulation. At the moment the threshold will only see one moment in time.
Maybe there a way to apply a temporal threshold? Such that the filter will apply the scalar value for all timesteps?
--
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909<tel:518-881-4909>
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From david.thompson at kitware.com Mon Jan 26 13:14:40 2015
From: david.thompson at kitware.com (David Thompson)
Date: Mon, 26 Jan 2015 13:14:40 -0500
Subject: [Paraview] [EXTERNAL] Re: temporal threshold
In-Reply-To: <90958babad074fbcb8224257ceffbf95@ES05AMSNLNT.srn.sandia.gov>
References: <CAMYd9p-qVD57=RYMH5c1ih2FiW9P93ra0_=47pkFA2K_CQ1C_g@mail.gmail.com>
<CANjZAi8cOW-UZgWb0wz0HMVEwu8HxfrxJDpeBU631FMDyX0+Aw@mail.gmail.com>
<CAMYd9p9huV+qP58ScpEn1VOBAiG6hYDu6HOY+YJeN1OtGns59Q@mail.gmail.com>
<CANjZAi_5UxMbqQwGdHUcHNBkib3Wf9-hwXUATauycVCB=vytbg@mail.gmail.com>
<f4162a7a498c4b28b4fa79cbdde52648@ES05AMSNLNT.srn.sandia.gov>
<D0EBCFD4.20199%kmorel@sandia.gov>
<90958babad074fbcb8224257ceffbf95@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <93C09048-67E1-48B8-B81D-3E18D422AD5B@kitware.com>
> You may be right. I am just dredging up old memories from a few years ago. David Thompson should remember ? he helped write the filter. David?
I am sure that at one point it worked in parallel, with the caveat that samples of points or point-data will over-represent values on process boundaries (because ParaView does not have knowledge of how many processes hold any given process-boundary point).
Err, and as I see Ken just mentioned, I only worked on the statistics filters that Temporal Statistics uses under the hood.
David
From wascott at sandia.gov Mon Jan 26 13:22:23 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Mon, 26 Jan 2015 18:22:23 +0000
Subject: [Paraview] [EXTERNAL] Re: temporal threshold
In-Reply-To: <93C09048-67E1-48B8-B81D-3E18D422AD5B@kitware.com>
References: <CAMYd9p-qVD57=RYMH5c1ih2FiW9P93ra0_=47pkFA2K_CQ1C_g@mail.gmail.com>
<CANjZAi8cOW-UZgWb0wz0HMVEwu8HxfrxJDpeBU631FMDyX0+Aw@mail.gmail.com>
<CAMYd9p9huV+qP58ScpEn1VOBAiG6hYDu6HOY+YJeN1OtGns59Q@mail.gmail.com>
<CANjZAi_5UxMbqQwGdHUcHNBkib3Wf9-hwXUATauycVCB=vytbg@mail.gmail.com>
<f4162a7a498c4b28b4fa79cbdde52648@ES05AMSNLNT.srn.sandia.gov>
<D0EBCFD4.20199%kmorel@sandia.gov>
<90958babad074fbcb8224257ceffbf95@ES05AMSNLNT.srn.sandia.gov>
<93C09048-67E1-48B8-B81D-3E18D422AD5B@kitware.com>
Message-ID: <6e01ad769ed94d7cada607749515b5c7@ES05AMSNLNT.srn.sandia.gov>
I stand corrected. Thanks for the feedback.
Alan
-----Original Message-----
From: David Thompson [mailto:david.thompson at kitware.com]
Sent: Monday, January 26, 2015 11:15 AM
To: Scott, W Alan
Cc: Moreland, Kenneth; David E DeMarle; timcfagan .; paraview at paraview.org
Subject: Re: [Paraview] [EXTERNAL] Re: temporal threshold
> You may be right. I am just dredging up old memories from a few years ago. David Thompson should remember ? he helped write the filter. David?
I am sure that at one point it worked in parallel, with the caveat that samples of points or point-data will over-represent values on process boundaries (because ParaView does not have knowledge of how many processes hold any given process-boundary point).
Err, and as I see Ken just mentioned, I only worked on the statistics filters that Temporal Statistics uses under the hood.
David
From belanma at mcmaster.ca Mon Jan 26 14:12:19 2015
From: belanma at mcmaster.ca (Mark Belan)
Date: Mon, 26 Jan 2015 14:12:19 -0500
Subject: [Paraview] [EXTERNAL] Plotting data to an existing model's
surface
In-Reply-To: <CANjZAi_=+M8CWz5_NRAdq2W_rPAD69xUiQKn2+uBy0GMaB8GJw@mail.gmail.com>
References: <CAFw8VoR=PX2pEkq1D3T99brpzOjQ4WQ9+wLXAbG3rPQRNic1yA@mail.gmail.com>
<5f735f96ac0644ffac610a9b2c90c514@ES05AMSNLNT.srn.sandia.gov>
<CANjZAi_gTukgdj6vWuOedzHCVNO3sPYQW6DxySz5-ifZ3O9=HQ@mail.gmail.com>
<CAFw8VoTAGhni6EOeNL77d6O3TekHmuu+w1ig2cdESVv4LU80RQ@mail.gmail.com>
<CANjZAi_=+M8CWz5_NRAdq2W_rPAD69xUiQKn2+uBy0GMaB8GJw@mail.gmail.com>
Message-ID: <CAFw8VoSsnsrZuT-i8uOodbEx4qFkyfH4ixOqJ_veRs5tRQmQUQ@mail.gmail.com>
Hi all,
Thanks for your suggestions. I was able to follow the directions but I'm
afraid the outcome wasn't what I was looking for.
I am going to send out another email shortly that will hopefully better
explain what I currently have and what I want to achieve.
- Mark
On Mon, Jan 26, 2015 at 10:38 AM, David E DeMarle <dave.demarle at kitware.com>
wrote:
> Filters->Programmable Filter
>
> Copy and paste the text into the Script entry field then hit Apply.
>
> vtkSurfaceReconstruction doesn't have the concave shape limitation that
> Delaunay has - but it isn't a perfect mesh of the surface either. Perhaps
> the vtk or paraview mailing lists contain a better alternative to either.
>
>
>
> David E DeMarle
> Kitware, Inc.
> R&D Engineer
> 21 Corporate Drive
> Clifton Park, NY 12065-8662
> Phone: 518-881-4909
>
> On Mon, Jan 26, 2015 at 10:14 AM, Mark Belan <belanma at mcmaster.ca> wrote:
>
>> Hi David,
>>
>> Thanks for your suggestion. I was able to successfully render my points
>> in a .csv file into specific points on the model (thanks Alan!), but I'm
>> not sure how to go about the next steps into turning the points into a mesh
>> and thus interpolating.
>>
>> Where can I input these python commands in paraview? I'm afraid my skills
>> in programming are minimal.
>>
>> Thanks for your help,
>>
>> - Mark
>>
>> On Fri, Jan 23, 2015 at 4:24 PM, David E DeMarle <
>> dave.demarle at kitware.com> wrote:
>>
>>> After you
>>>
>>> 1) get the list of points and values in the csv file:
>>> x,y,z,val1,val2,?
>>> 2) read into paraview and converted from a table to a vtkpointset as
>>> Alan suggested
>>> 3) try the vtkSurfaceReconstruction filter to convert it into a mesh.
>>> That isn't exposed in ParaView (maybe not parallel aware) so use this
>>> python programmable filter to do use it:
>>>
>>> import vtk
>>>
>>> pdi = self.GetPolyDataInput()
>>>
>>>
>>> subf1 = vtk.vtkSurfaceReconstructionFilter()
>>>
>>> subf1.SetInputData(pdi)
>>>
>>> subf2 = vtk.vtkContourFilter()
>>>
>>> subf2.SetInputConnection(subf1.GetOutputPort())
>>>
>>> subf2.SetValue(0, 0.0)
>>>
>>> subf2.Update()
>>>
>>>
>>> pdo = self.GetPolyDataOutput()
>>>
>>> pdo.ShallowCopy(subf2.GetOutput())
>>>
>>> ParaView will then happily interpolate values across the faces of the
>>> mesh
>>>
>>>
>>>
>>> David E DeMarle
>>> Kitware, Inc.
>>> R&D Engineer
>>> 21 Corporate Drive
>>> Clifton Park, NY 12065-8662
>>> Phone: 518-881-4909
>>>
>>> On Fri, Jan 23, 2015 at 3:51 PM, Scott, W Alan <wascott at sandia.gov>
>>> wrote:
>>>
>>>> Mark,
>>>>
>>>> I don?t know the answer to your question, but a few years ago I wrote a
>>>> wiki page on converting .csv file data into points and structured grids.
>>>> The write-up is here: http://www.paraview.org/Wiki/Data_formats.
>>>> Hope that helps.
>>>>
>>>>
>>>>
>>>> Alan
>>>>
>>>>
>>>>
>>>> *From:* ParaView [mailto:paraview-bounces at paraview.org] *On Behalf Of *Mark
>>>> Belan
>>>> *Sent:* Thursday, January 22, 2015 9:50 AM
>>>> *To:* paraview at paraview.org
>>>> *Subject:* [EXTERNAL] [Paraview] Plotting data to an existing model's
>>>> surface
>>>>
>>>>
>>>>
>>>> Hello all,
>>>>
>>>> I'm a graduate student in geology trying to do some visual data work,
>>>> but I'm afraid my inexperience with paraview is making things a bit
>>>> difficult for me.
>>>>
>>>> Essentially what I'm trying to create is a 3D model of a rock that has
>>>> its surface coloured to show spatial distribution of a physical property
>>>> associated with certain areas on the rock.
>>>>
>>>> I was able to reproduce the rock I sample from using a 3D scanner but I
>>>> have no idea how to go about selecting particular areas of the rock's
>>>> surface, assigning a value to that "area", and having the program
>>>> interpolate between multiple "areas". Essentially I'd like this to produce
>>>> a color gradient showcasing the changing values.
>>>>
>>>> Can anyone offer some guidance/direction? I had someone at my campus
>>>> suggest creating a .csv file with x,y,z coordinates of the particular areas
>>>> of the model of interest, but after doing that all I've produced are
>>>> "points"...not sure how to specify the association to the model and color
>>>> and interpolation, etc.
>>>>
>>>> Thanks for any help,
>>>>
>>>> - Mark
>>>> --
>>>>
>>>> *Mark Belan*, B. Art Sc.
>>>> *M. Sc. Candidate - Astrobiology*
>>>>
>>>> *Lewis and Ruth Sherman Graduate Fellow*
>>>>
>>>> McMaster University
>>>>
>>>> School of Geography and Earth Sciences
>>>>
>>>> GSB 323
>>>> 1280 Main Street West
>>>> Hamilton, Ontario
>>>> Canada
>>>> L8S 4L8
>>>>
>>>> *Art*: www.markbelan.com
>>>>
>>>> _______________________________________________
>>>> Powered by www.kitware.com
>>>>
>>>> Visit other Kitware open-source projects at
>>>> http://www.kitware.com/opensource/opensource.html
>>>>
>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>> http://paraview.org/Wiki/ParaView
>>>>
>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>
>>>> Follow this link to subscribe/unsubscribe:
>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>
>>>>
>>>
>>
>>
>> --
>> *Mark Belan*, B. Art Sc.
>> *M. Sc. Candidate - Astrobiology*
>> *Lewis and Ruth Sherman Graduate Fellow*
>> McMaster University
>> School of Geography and Earth Sciences
>> GSB 323
>> 1280 Main Street West
>> Hamilton, Ontario
>> Canada
>> L8S 4L8
>>
>> *Art*: www.markbelan.com
>>
>
>
--
*Mark Belan*, B. Art Sc.
*M. Sc. Candidate - Astrobiology*
*Lewis and Ruth Sherman Graduate Fellow*
McMaster University
School of Geography and Earth Sciences
GSB 323
1280 Main Street West
Hamilton, Ontario
Canada
L8S 4L8
*Art*: www.markbelan.com
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From belanma at mcmaster.ca Mon Jan 26 14:12:22 2015
From: belanma at mcmaster.ca (Mark Belan)
Date: Mon, 26 Jan 2015 14:12:22 -0500
Subject: [Paraview] color mapping + interpolation of areas of a pre-existing
model's surface.
Message-ID: <CAFw8VoS+_THAkVQkg7GSz=R6D-9o+euLmQ=g7RPgt2+AzZbLZA@mail.gmail.com>
Hello all,
I am trying to develop a surface spatial distribution of data onto a
pre-existing 3D model. The model I currently have is composed of some 80K
polygons in mesh format (.obj file, captured via 3D scanner) and what I'm
trying to figure out is how to assign several areas of the mesh with values
(ie: isotopic data) and have the areas interpolate to cover the surface.
The images I've attached include the current model I am working on and the
approximate size and areas of where I'm sampling.
I'm wondering if instead of assigning scalars to each and every vertex of
the model, is it possible to assign scalars to groups of polygons and
interpolate this way? (that is, assign the "dots" in the "example" image
with values and have the "dots" interpolate amongst each other over the
surface of the model)?
Ideally, this would include much more than just 3 measurements but I am
trying to familiarize a general process of creating this before I receive
actual data.
If not, any guidance or suggestions to achieve the representation I want?
Thanks in advance for your help, I understand this may be a very unique
goal for Paraview.
- Mark
--
*Mark Belan*, B. Art Sc.
*M. Sc. Candidate - Astrobiology*
*Lewis and Ruth Sherman Graduate Fellow*
McMaster University
School of Geography and Earth Sciences
GSB 323
1280 Main Street West
Hamilton, Ontario
Canada
L8S 4L8
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From kmorel at sandia.gov Mon Jan 26 14:27:19 2015
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Mon, 26 Jan 2015 19:27:19 +0000
Subject: [Paraview] color mapping + interpolation of areas of a
pre-existing model's surface.
Message-ID: <D0EBE262.201B2%kmorel@sandia.gov>
Mark,
I cannot think of any straightforward way to interpolate scalar values sparsely dispersed across a mesh.
I think a much more straightforward approach would be to use these dots in 3D space to define a function f(x,y,z) that interpolates values in all 3D space, and then use either the array calculator or the Python calculator to compute that value at each point.
-Ken
From: Mark Belan <belanma at mcmaster.ca<mailto:belanma at mcmaster.ca>>
Date: Monday, January 26, 2015 at 12:12 PM
To: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: [EXTERNAL] [Paraview] color mapping + interpolation of areas of a pre-existing model's surface.
Hello all,
I am trying to develop a surface spatial distribution of data onto a pre-existing 3D model. The model I currently have is composed of some 80K polygons in mesh format (.obj file, captured via 3D scanner) and what I'm trying to figure out is how to assign several areas of the mesh with values (ie: isotopic data) and have the areas interpolate to cover the surface.
The images I've attached include the current model I am working on and the approximate size and areas of where I'm sampling.
I'm wondering if instead of assigning scalars to each and every vertex of the model, is it possible to assign scalars to groups of polygons and interpolate this way? (that is, assign the "dots" in the "example" image with values and have the "dots" interpolate amongst each other over the surface of the model)?
Ideally, this would include much more than just 3 measurements but I am trying to familiarize a general process of creating this before I receive actual data.
If not, any guidance or suggestions to achieve the representation I want?
Thanks in advance for your help, I understand this may be a very unique goal for Paraview.
- Mark
--
Mark Belan, B. Art Sc.
M. Sc. Candidate - Astrobiology
Lewis and Ruth Sherman Graduate Fellow
McMaster University
School of Geography and Earth Sciences
GSB 323
1280 Main Street West
Hamilton, Ontario
Canada
L8S 4L8
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From timcfagan at gmail.com Mon Jan 26 14:57:58 2015
From: timcfagan at gmail.com (timcfagan .)
Date: Tue, 27 Jan 2015 06:57:58 +1100
Subject: [Paraview] [EXTERNAL] Re: temporal threshold
In-Reply-To: <6e01ad769ed94d7cada607749515b5c7@ES05AMSNLNT.srn.sandia.gov>
References: <CAMYd9p-qVD57=RYMH5c1ih2FiW9P93ra0_=47pkFA2K_CQ1C_g@mail.gmail.com>
<CANjZAi8cOW-UZgWb0wz0HMVEwu8HxfrxJDpeBU631FMDyX0+Aw@mail.gmail.com>
<CAMYd9p9huV+qP58ScpEn1VOBAiG6hYDu6HOY+YJeN1OtGns59Q@mail.gmail.com>
<CANjZAi_5UxMbqQwGdHUcHNBkib3Wf9-hwXUATauycVCB=vytbg@mail.gmail.com>
<f4162a7a498c4b28b4fa79cbdde52648@ES05AMSNLNT.srn.sandia.gov>
<D0EBCFD4.20199%kmorel@sandia.gov>
<90958babad074fbcb8224257ceffbf95@ES05AMSNLNT.srn.sandia.gov>
<93C09048-67E1-48B8-B81D-3E18D422AD5B@kitware.com>
<6e01ad769ed94d7cada607749515b5c7@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <CAMYd9p9rf=jHWd-RRyprU108PKRO2jSLrRsFjGd-WSuxXVbipQ@mail.gmail.com>
Thanks, I see from Ken's comment that my problem is a changing topology.
Some of the nodes in the grid will become active over time... I've tried
sectioning away the regions that become active, but this didn't work... Is
there a better way to get around topology change for this filter?
On Tue, Jan 27, 2015 at 5:22 AM, Scott, W Alan <wascott at sandia.gov> wrote:
> I stand corrected. Thanks for the feedback.
>
> Alan
>
> -----Original Message-----
> From: David Thompson [mailto:david.thompson at kitware.com]
> Sent: Monday, January 26, 2015 11:15 AM
> To: Scott, W Alan
> Cc: Moreland, Kenneth; David E DeMarle; timcfagan .; paraview at paraview.org
> Subject: Re: [Paraview] [EXTERNAL] Re: temporal threshold
>
> > You may be right. I am just dredging up old memories from a few years
> ago. David Thompson should remember ? he helped write the filter. David?
>
> I am sure that at one point it worked in parallel, with the caveat that
> samples of points or point-data will over-represent values on process
> boundaries (because ParaView does not have knowledge of how many processes
> hold any given process-boundary point).
>
> Err, and as I see Ken just mentioned, I only worked on the statistics
> filters that Temporal Statistics uses under the hood.
>
> David
>
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From kmorel at sandia.gov Mon Jan 26 15:08:13 2015
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Mon, 26 Jan 2015 20:08:13 +0000
Subject: [Paraview] [EXTERNAL] Re: temporal threshold
In-Reply-To: <CAMYd9p9rf=jHWd-RRyprU108PKRO2jSLrRsFjGd-WSuxXVbipQ@mail.gmail.com>
References: <CAMYd9p-qVD57=RYMH5c1ih2FiW9P93ra0_=47pkFA2K_CQ1C_g@mail.gmail.com>
<CANjZAi8cOW-UZgWb0wz0HMVEwu8HxfrxJDpeBU631FMDyX0+Aw@mail.gmail.com>
<CAMYd9p9huV+qP58ScpEn1VOBAiG6hYDu6HOY+YJeN1OtGns59Q@mail.gmail.com>
<CANjZAi_5UxMbqQwGdHUcHNBkib3Wf9-hwXUATauycVCB=vytbg@mail.gmail.com>
<f4162a7a498c4b28b4fa79cbdde52648@ES05AMSNLNT.srn.sandia.gov>
<D0EBCFD4.20199%kmorel@sandia.gov>
<90958babad074fbcb8224257ceffbf95@ES05AMSNLNT.srn.sandia.gov>
<93C09048-67E1-48B8-B81D-3E18D422AD5B@kitware.com>
<6e01ad769ed94d7cada607749515b5c7@ES05AMSNLNT.srn.sandia.gov>
<CAMYd9p9rf=jHWd-RRyprU108PKRO2jSLrRsFjGd-WSuxXVbipQ@mail.gmail.com>
Message-ID: <D0EBEC3E.201C3%kmorel@sandia.gov>
There is no straightforward way of getting around changing topology.
One so-so way to solve the problem is to build a static topology and use the Resample With Dataset filter to apply the field values in the changing topology to the static topology. You should then be able to run the temporal statistics filter on the static topology.
-Ken
From: "timcfagan ." <timcfagan at gmail.com<mailto:timcfagan at gmail.com>>
Date: Monday, January 26, 2015 at 12:57 PM
To: Walter Scott <wascott at sandia.gov<mailto:wascott at sandia.gov>>
Cc: David Thompson <david.thompson at kitware.com<mailto:david.thompson at kitware.com>>, Kenneth Moreland <kmorel at sandia.gov<mailto:kmorel at sandia.gov>>, David E DeMarle <dave.demarle at kitware.com<mailto:dave.demarle at kitware.com>>, "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: Re: [Paraview] [EXTERNAL] Re: temporal threshold
Thanks, I see from Ken's comment that my problem is a changing topology. Some of the nodes in the grid will become active over time... I've tried sectioning away the regions that become active, but this didn't work... Is there a better way to get around topology change for this filter?
On Tue, Jan 27, 2015 at 5:22 AM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov>> wrote:
I stand corrected. Thanks for the feedback.
Alan
-----Original Message-----
From: David Thompson [mailto:david.thompson at kitware.com<mailto:david.thompson at kitware.com>]
Sent: Monday, January 26, 2015 11:15 AM
To: Scott, W Alan
Cc: Moreland, Kenneth; David E DeMarle; timcfagan .; paraview at paraview.org<mailto:paraview at paraview.org>
Subject: Re: [Paraview] [EXTERNAL] Re: temporal threshold
> You may be right. I am just dredging up old memories from a few years ago. David Thompson should remember - he helped write the filter. David?
I am sure that at one point it worked in parallel, with the caveat that samples of points or point-data will over-represent values on process boundaries (because ParaView does not have knowledge of how many processes hold any given process-boundary point).
Err, and as I see Ken just mentioned, I only worked on the statistics filters that Temporal Statistics uses under the hood.
David
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From timcfagan at gmail.com Tue Jan 27 03:35:27 2015
From: timcfagan at gmail.com (timcfagan .)
Date: Tue, 27 Jan 2015 19:35:27 +1100
Subject: [Paraview] [EXTERNAL] Re: temporal threshold
In-Reply-To: <D0EBEC3E.201C3%kmorel@sandia.gov>
References: <CAMYd9p-qVD57=RYMH5c1ih2FiW9P93ra0_=47pkFA2K_CQ1C_g@mail.gmail.com>
<CANjZAi8cOW-UZgWb0wz0HMVEwu8HxfrxJDpeBU631FMDyX0+Aw@mail.gmail.com>
<CAMYd9p9huV+qP58ScpEn1VOBAiG6hYDu6HOY+YJeN1OtGns59Q@mail.gmail.com>
<CANjZAi_5UxMbqQwGdHUcHNBkib3Wf9-hwXUATauycVCB=vytbg@mail.gmail.com>
<f4162a7a498c4b28b4fa79cbdde52648@ES05AMSNLNT.srn.sandia.gov>
<D0EBCFD4.20199%kmorel@sandia.gov>
<90958babad074fbcb8224257ceffbf95@ES05AMSNLNT.srn.sandia.gov>
<93C09048-67E1-48B8-B81D-3E18D422AD5B@kitware.com>
<6e01ad769ed94d7cada607749515b5c7@ES05AMSNLNT.srn.sandia.gov>
<CAMYd9p9rf=jHWd-RRyprU108PKRO2jSLrRsFjGd-WSuxXVbipQ@mail.gmail.com>
<D0EBEC3E.201C3%kmorel@sandia.gov>
Message-ID: <CAMYd9p--b4ET_2_fKbLR+fn_aPO6nr1=W+bQoY0M0Bqt7Ku_cQ@mail.gmail.com>
Thanks Ken, I made a csv file from data of the first time step, imported
it, and used the Table to Points filter to create the static topology. The
Resample with Dataset filter and Temporal Statistics filter then worked
fine.
On Tue, Jan 27, 2015 at 7:08 AM, Moreland, Kenneth <kmorel at sandia.gov>
wrote:
> There is no straightforward way of getting around changing topology.
>
> One so-so way to solve the problem is to build a static topology and use
> the Resample With Dataset filter to apply the field values in the changing
> topology to the static topology. You should then be able to run the
> temporal statistics filter on the static topology.
>
> -Ken
>
> From: "timcfagan ." <timcfagan at gmail.com>
> Date: Monday, January 26, 2015 at 12:57 PM
> To: Walter Scott <wascott at sandia.gov>
> Cc: David Thompson <david.thompson at kitware.com>, Kenneth Moreland <
> kmorel at sandia.gov>, David E DeMarle <dave.demarle at kitware.com>, "
> paraview at paraview.org" <paraview at paraview.org>
> Subject: Re: [Paraview] [EXTERNAL] Re: temporal threshold
>
> Thanks, I see from Ken's comment that my problem is a changing
> topology. Some of the nodes in the grid will become active over time...
> I've tried sectioning away the regions that become active, but this didn't
> work... Is there a better way to get around topology change for this filter?
>
> On Tue, Jan 27, 2015 at 5:22 AM, Scott, W Alan <wascott at sandia.gov> wrote:
>
>> I stand corrected. Thanks for the feedback.
>>
>> Alan
>>
>> -----Original Message-----
>> From: David Thompson [mailto:david.thompson at kitware.com]
>> Sent: Monday, January 26, 2015 11:15 AM
>> To: Scott, W Alan
>> Cc: Moreland, Kenneth; David E DeMarle; timcfagan .;
>> paraview at paraview.org
>> Subject: Re: [Paraview] [EXTERNAL] Re: temporal threshold
>>
>> > You may be right. I am just dredging up old memories from a few
>> years ago. David Thompson should remember ? he helped write the filter.
>> David?
>>
>> I am sure that at one point it worked in parallel, with the caveat that
>> samples of points or point-data will over-represent values on process
>> boundaries (because ParaView does not have knowledge of how many processes
>> hold any given process-boundary point).
>>
>> Err, and as I see Ken just mentioned, I only worked on the statistics
>> filters that Temporal Statistics uses under the hood.
>>
>> David
>>
>
>
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From archaerolog at mail.ru Tue Jan 27 04:09:10 2015
From: archaerolog at mail.ru (Gena Bug)
Date: Tue, 27 Jan 2015 12:09:10 +0300
Subject: [Paraview] Fwd: Re: ANN: ParaView 4.3.1 is available for
download
In-Reply-To: <CADHSJjAMC8+-roc0M0jTB+_F7zNr2obR8ktb2Xq5zQGBFag=7w@mail.gmail.com>
References: <54BF962A.3040903@mail.ru> <54BFA12E.7070103@mail.ru> <CADHSJjB69CjELfJsdABoe_ptX9G+8nZNxNqkmpe3uS0ZMSaiHw@mail.gmail.com> <54C20AAC.9070601@mail.ru>
<CADHSJjAMC8+-roc0M0jTB+_F7zNr2obR8ktb2Xq5zQGBFag=7w@mail.gmail.com>
Message-ID: <54C755B6.2060904@mail.ru>
Thanks, Utkarsh! I also reported a bug:
http://www.paraview.org/Bug/view.php?id=15278
They should be combined I think
On 01/26/2015 06:32 PM, Utkarsh Ayachit wrote:
> Ah! Thanks, Gena. It must have fell through the cracks when we
> refactored the settings infrastructure for 4.2. I've reported a bug:
> http://www.paraview.org/Bug/view.php?id=15283
>
> Utkarsh
>
> On Fri, Jan 23, 2015 at 3:47 AM, Gena Bug <archaerolog at mail.ru> wrote:
>>
>>
>> On 21.01.2015 17:44, Utkarsh Ayachit wrote:
>>>
>>> Gena,
>>>
>>>> a) can't permanently change camera settings (Edit->Settings->Camera) --
>>>> default values restored after restart
>>>
>>>
>>> If I am not mistaken, this was never supported, right? Mind adding a
>>> feature request to the bug tracker so we don't forget about this?
>>> Thanks.
>>
>> No, it's not right. I've just checked PV 4.1.0 and it saves its camera
>> settings permanently.
>>
>>>
>>>> b) it's really hard to work with advanced properties of Line Chart View
>>>> -- for example simply add notation to an axis is difficult! It would be
>>>> great to have separate window for such settings (as it was in previous
>>>> releases, 4.1 and earlier).
>>>
>>>
>>> That's doable. See Chapter 9, Section 9.2. Or this blog post [1]
>>
>> Thanks, that's better. Not so convenient as it was before but OK
>>
>>> [1] http://www.kitware.com/blog/home/post/673
>>>
>>> Utkarsh
>>> .
>>>
>>
> .
>
From ceccon at poli.ufrj.br Tue Jan 27 05:26:05 2015
From: ceccon at poli.ufrj.br (Pedro Ceccon Thurler)
Date: Tue, 27 Jan 2015 08:26:05 -0200
Subject: [Paraview] How to plot data from a specific point over time?
In-Reply-To: <CANjZAi-9gLbzBKFrfAPZU+dGPmC-49_-mijD4gddaMpABcREJw@mail.gmail.com>
References: <CABX6FTx3tsubRrHMBRJOxsNs3gBqHg_F536JJY6b=3M8utpDUA@mail.gmail.com>
<54BFD76F.8070301@gmail.com>
<CABX6FTyrswVmdUaHAYdfOaD3LcoMhC++8RkVSHo5W67mZ8xnWg@mail.gmail.com>
<CAMaOp+HwUs4tc-GAb4yQy0iPFV86+bU3UeY8=RNHxb0G2tHYTQ@mail.gmail.com>
<CABX6FTwAZWjOE0602J1bHQ29LCpexGKz5XHjS3Kxuh9HnstBXg@mail.gmail.com>
<CANjZAi-9gLbzBKFrfAPZU+dGPmC-49_-mijD4gddaMpABcREJw@mail.gmail.com>
Message-ID: <CABX6FTxMGFTy_7FFOtMDJ8asJK6SK4inBs6=1ue=nGwuF-hvyw@mail.gmail.com>
Thank you one more time, guys!
Your help has been really usefull to me.
Pedro Ceccon Thurler
Bolsista CNPq - Laborat?rio de Simula??o de Sistemas de Constru??o Naval
Departamento de Engenharia Naval e Oce?nica - UFRJ
Cel: (21) 9 8234-9794
2015-01-23 14:12 GMT-02:00 David E DeMarle <dave.demarle at kitware.com>:
> Click on the filter in the pipeline and then go to save data.
> Choose csv format, which excel will readily read.
>
>
> David E DeMarle
> Kitware, Inc.
> R&D Engineer
> 21 Corporate Drive
> Clifton Park, NY 12065-8662
> Phone: 518-881-4909
>
> On Fri, Jan 23, 2015 at 11:03 AM, Pedro Ceccon Thurler <
> ceccon at poli.ufrj.br> wrote:
>
>> Thank you all, guys!
>> I solved my problem. I'm able to plot the data now.
>> But, only one more question: is it possible to export this plot data to a
>> Excel file?
>> If it's possible, how do I do that?
>>
>>
>>
>> Pedro Ceccon Thurler
>>
>> Bolsista CNPq - Laborat?rio de Simula??o de Sistemas de Constru??o Naval
>> Departamento de Engenharia Naval e Oce?nica - UFRJ
>> Cel: (21) 9 8234-9794
>>
>> 2015-01-21 14:58 GMT-02:00 Andy Bauer <andy.bauer at kitware.com>:
>>
>>> For moving grids or grids that don't have a grid point exactly at the
>>> coordinate you want to plot over time, you can use the probe filter to get
>>> the desired location and then use the plot selection over time for that.
>>>
>>> On Wed, Jan 21, 2015 at 11:57 AM, Pedro Ceccon Thurler <
>>> ceccon at poli.ufrj.br> wrote:
>>>
>>>> The guys from the lab did an experiment and measured the residual
>>>> stress on some points with specific coordinates.
>>>> I have to measure the stress on the same points along time in my
>>>> simulation so i can compare the results with the real values and validate
>>>> my model.
>>>> But I don't know how to do that.
>>>>
>>>> Pedro Ceccon Thurler
>>>>
>>>> Bolsista CNPq - Laborat?rio de Simula??o de Sistemas de Constru??o Naval
>>>> Departamento de Engenharia Naval e Oce?nica - UFRJ
>>>> Cel: (21) 9 8234-9794
>>>>
>>>> 2015-01-21 14:44 GMT-02:00 Armin Wehrfritz <dkxls23 at gmail.com>:
>>>>
>>>> Have you tried the "Plot Selection Over Time" filter?
>>>>> It's in "Filter->Data Analysis". You can select cell or point data.
>>>>>
>>>>> -Armin
>>>>>
>>>>>
>>>>>
>>>>>
>>>>> On 01/21/2015 06:35 PM, Pedro Ceccon Thurler wrote:
>>>>>
>>>>>> Hey guys!
>>>>>> I'm in trouble trying to make some plots in paraview.
>>>>>> For my analysis, it's important to plot data from a specific point
>>>>>> over
>>>>>> time.
>>>>>> I'm trying some filters, but I'm not succeeding. Do you have some tips
>>>>>> or advices? Thank you for your attention.
>>>>>>
>>>>>> Pedro Ceccon Thurler
>>>>>>
>>>>>> Bolsista CNPq - Laborat?rio de Simula??o de Sistemas de Constru??o
>>>>>> Naval
>>>>>> Departamento de Engenharia Naval e Oce?nica - UFRJ
>>>>>> Cel: (21) 9 8234-9794
>>>>>>
>>>>>>
>>>>>> _______________________________________________
>>>>>> Powered by www.kitware.com
>>>>>>
>>>>>> Visit other Kitware open-source projects at http://www.kitware.com/
>>>>>> opensource/opensource.html
>>>>>>
>>>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>>>> http://paraview.org/Wiki/ParaView
>>>>>>
>>>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>>>
>>>>>> Follow this link to subscribe/unsubscribe:
>>>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>>>
>>>>>> _______________________________________________
>>>>> Powered by www.kitware.com
>>>>>
>>>>> Visit other Kitware open-source projects at http://www.kitware.com/
>>>>> opensource/opensource.html
>>>>>
>>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>>> http://paraview.org/Wiki/ParaView
>>>>>
>>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>>
>>>>> Follow this link to subscribe/unsubscribe:
>>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>>
>>>>
>>>>
>>>> _______________________________________________
>>>> Powered by www.kitware.com
>>>>
>>>> Visit other Kitware open-source projects at
>>>> http://www.kitware.com/opensource/opensource.html
>>>>
>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>> http://paraview.org/Wiki/ParaView
>>>>
>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>
>>>> Follow this link to subscribe/unsubscribe:
>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>
>>>>
>>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>
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From felipe.bordeu at ec-nantes.fr Tue Jan 27 10:47:09 2015
From: felipe.bordeu at ec-nantes.fr (Felipe Bordeu Weldt)
Date: Tue, 27 Jan 2015 16:47:09 +0100
Subject: [Paraview] color mapping + interpolation of areas of a
pre-existing model's surface.
In-Reply-To: <D0EBE262.201B2%kmorel@sandia.gov>
References: <D0EBE262.201B2%kmorel@sandia.gov>
Message-ID: <A0B9F45B-36D1-49C1-9280-6BE62979E793@ec-nantes.fr>
You can solve 3 Lapacians problem (one for each color component) to calculate the interpolation of the color.
Imagine that the red component of the color is like temperature. So you solve a problem with impose temperature on the sampling points to get the ? interpolated ? color in the rest of the domain.
Felipe
Le 26 janv. 2015 ? 20:27, Moreland, Kenneth <kmorel at sandia.gov> a ?crit :
> Mark,
>
> I cannot think of any straightforward way to interpolate scalar values sparsely dispersed across a mesh.
>
> I think a much more straightforward approach would be to use these dots in 3D space to define a function f(x,y,z) that interpolates values in all 3D space, and then use either the array calculator or the Python calculator to compute that value at each point.
>
> -Ken
>
> From: Mark Belan <belanma at mcmaster.ca>
> Date: Monday, January 26, 2015 at 12:12 PM
> To: "paraview at paraview.org" <paraview at paraview.org>
> Subject: [EXTERNAL] [Paraview] color mapping + interpolation of areas of a pre-existing model's surface.
>
> Hello all,
>
> I am trying to develop a surface spatial distribution of data onto a pre-existing 3D model. The model I currently have is composed of some 80K polygons in mesh format (.obj file, captured via 3D scanner) and what I'm trying to figure out is how to assign several areas of the mesh with values (ie: isotopic data) and have the areas interpolate to cover the surface.
>
> The images I've attached include the current model I am working on and the approximate size and areas of where I'm sampling.
>
> I'm wondering if instead of assigning scalars to each and every vertex of the model, is it possible to assign scalars to groups of polygons and interpolate this way? (that is, assign the "dots" in the "example" image with values and have the "dots" interpolate amongst each other over the surface of the model)?
>
> Ideally, this would include much more than just 3 measurements but I am trying to familiarize a general process of creating this before I receive actual data.
>
> If not, any guidance or suggestions to achieve the representation I want?
>
> Thanks in advance for your help, I understand this may be a very unique goal for Paraview.
>
> - Mark
>
> --
> Mark Belan, B. Art Sc.
> M. Sc. Candidate - Astrobiology
> Lewis and Ruth Sherman Graduate Fellow
> McMaster University
> School of Geography and Earth Sciences
> GSB 323
> 1280 Main Street West
> Hamilton, Ontario
> Canada
> L8S 4L8
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
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From timcfagan at gmail.com Tue Jan 27 23:55:17 2015
From: timcfagan at gmail.com (timcfagan .)
Date: Wed, 28 Jan 2015 15:55:17 +1100
Subject: [Paraview] particle surface based on position
Message-ID: <CAMYd9p8uM-MO8k61Wq0gR0BVs+BCjTV=Vppztip_7RuXtT3-wQ@mail.gmail.com>
Is there a way for paraview to generate a surface based on point positions?
Viewing particle data as a surface, it just shows the points. One way I
have generated a "surface" is to use a contour by mass on nodal points. But
this is a bit iffy as changing the mass threshold will add or remove parts
of the surface.
Attached is an image for both of these. The contour looks okay, but
probably isn't the right way to go about it...
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From i.krukow at tu-braunschweig.de Wed Jan 28 05:15:05 2015
From: i.krukow at tu-braunschweig.de (Ian Krukow)
Date: Wed, 28 Jan 2015 11:15:05 +0100
Subject: [Paraview] Scalar bar modifications
Message-ID: <54C8B6A9.20003@tu-braunschweig.de>
Hi all,
a colleague of mine is trying modify the scalar bar according to his
preferences, and though he is almost there, there are two questions left
open:
1. Is it possible to influence or remove the minor tick marks? He has
not found any option to do that.
2. Why are the tick labels 'labels', whereas the min-max-values are
'annotations'? The question arose, because he wanted to change the
numerical format, which is no problem for the labels, but he had to set
an explicit string for the min-max-values, which is not very convenient.
He is using Paraview 4.1.
Kind regards
Ian
From grothausmann.roman at mh-hannover.de Wed Jan 28 07:02:10 2015
From: grothausmann.roman at mh-hannover.de (Dr. Roman Grothausmann)
Date: Wed, 28 Jan 2015 13:02:10 +0100
Subject: [Paraview] [ITK-users] compile itk (VTKGlue ON) with vtk from
paraview
In-Reply-To: <CALzTN-S8KLZcp30bLkdNEpTK8zR3L3xT6D--XhmF5JVjKngz6A@mail.gmail.com>
References: <54C0CF2E.3060106@mh-hannover.de> <54C2125D.7090801@mh-hannover.de> <CALzTN-SJcZYJT+twE_fXXWi7tyTe6u9JhFSGy1W03-C9PU-=LA@mail.gmail.com> <54C6029C.4040600@mh-hannover.de>
<CALzTN-S8KLZcp30bLkdNEpTK8zR3L3xT6D--XhmF5JVjKngz6A@mail.gmail.com>
Message-ID: <54C8CFC2.4000305@mh-hannover.de>
Hi Matt,
On 26/01/15 17:54, Matt McCormick wrote:
> I do not think the Midas Journal will be able to build your plugin.
OK, so I added a VTK test program. Is there a way to test if the automatic
testing environment would be able to build and run my VTK test program BEFORE
submitting the contribution to Midas?
(My last submission never got tested by the system so far, i.e. there is no
colde review reported:
http://www.vtkjournal.org/browse/publication/949)
> I would recommend creating build instructions to build against a
> ParaView build tree. I have just verified that ITK builds with the
> ITKVtkGlue module ON when pointing VTK_DIR to the <ParaView-build>/VTK
> directory.
Did You use BUILD_SHARED_LIBS ON for both ITK and ParaView? ITK also compiles
fine without any errors for me if I use BUILD_SHARED_LIBS OFF, however the
problems then arise when compiling the plugin.
If You like, You can test the compilation of the plugin with the code from the
git repository:
https://github.com/romangrothausmann/FacetAnalyser
Many thanks for looking into this.
Roman
On 26/01/15 17:54, Matt McCormick wrote:
> Hi Roman,
>
> Thanks for the update. Great to hear about the Midas Journal article!
>
> I do not think the Midas Journal will be able to build your plugin.
>
> I would recommend creating build instructions to build against a
> ParaView build tree. I have just verified that ITK builds with the
> ITKVtkGlue module ON when pointing VTK_DIR to the <ParaView-build>/VTK
> directory.
>
> I don't see the install tree VTKTargets.cmake file in my ParaView
> build, either. In the long term, the ParaView CMake configuration
> should be corrected.
>
> HTH,
> Matt
>
> On Mon, Jan 26, 2015 at 4:02 AM, Dr. Roman Grothausmann
> <grothausmann.roman at mh-hannover.de> wrote:
>> Hi Matt,
>>
>>
>> Thank You very much for Your reply.
>> I can only find one VTKTargets.cmake in
>> /opt/compilation/paraview-git_build/VTK/
>> It seems though that it is lacking the relevant entries for the libraries
>> that troubled me, e.g. vtkPVPythonCatalyst and
>> vtkUtilitiesPythonInitializer.
>>
>> I'm about to publish the ITK-VTK PV plugin in the Midas Journal, what
>> installation instructions should I give there?
>> Will the testing environment be able to compile this plugin and its tests or
>> should I disable automatic testing for this contribution?
>>
>> Many thanks for looking into this.
>> Roman
>>
>>
>> On 23/01/15 18:15, Matt McCormick wrote:
>>>
>>> Hi Roman,
>>>
>>> Thanks for looking into the issue and reporting it to the mailing list.
>>>
>>> Paraview should be installing VTKTargets.cmake, which tells the build
>>> system where to find the libraries. Note that there might be two
>>> VTKTargets.cmake files that are generated -- one for the build tree
>>> and one for the install tree.
>>>
>>> HTH,
>>> Matt
>>>
>>> On Fri, Jan 23, 2015 at 4:20 AM, Dr. Roman Grothausmann
>>> <grothausmann.roman at mh-hannover.de> wrote:
>>>>
>>>>
>>>> On 22/01/15 11:21, Dr. Roman Grothausmann wrote:
>>>>>
>>>>>
>>>>> Adding the abs. file locations to the build command does not help nor
>>>>> does
>>>>> -L/opt/paraview-4.3.1_git/lib/paraview-4.3/
>>>>
>>>>
>>>>
>>>> I figured that the vtk dynamic libraries of PV have the ending *-pv4.3.so
>>>> which seems to be the reason why the linker does not find them. If I
>>>> create
>>>> symbolic links to these files without the extension:
>>>>
>>>> cd /opt/compilation/paraview-git_build/lib/
>>>> for i in *-pv*.so; do ln -s $i ${i%-pv*}.so; done
>>>>
>>>> and adding -L/opt/compilation/paraview-git_build/lib/ to CMAKE_CXX_FLAGS
>>>> the compilation of ITK succeeds.
>>>>
>>>> I wonder, is that the way it's meant to be done?
>>>>
>>>>
>>>>
>>>>> What am I missing in my configuration of PV and ITK?
>>>>>
>>>>> When and where should I specify:
>>>>> CMAKE_CXX_FLAGS -fPIC
>>>>> BUILD_SHARED_LIBS ON/OFF
>>>>>
>>>>> Is this the right VTK_DIR specification for ITK:
>>>>> /opt/compilation/ParaView-v4.3.1/build/VTK
>>>>> or
>>>>> /opt/paraview-4.3.1_git/lib/cmake/paraview-4.3
>>>>>
>>>>>
>>>>>
>>>>> Many thanks for any help or hints.
>>>>> Roman
>>>>>
>>>>>
>>>>
>>>> --
>>>> Dr. Roman Grothausmann
>>>>
>>>> Tomographie und Digitale Bildverarbeitung
>>>> Tomography and Digital Image Analysis
>>>>
>>>> Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
>>>> Medizinische Hochschule Hannover
>>>> Carl-Neuberg-Str. 1
>>>> D-30625 Hannover
>>>>
>>>> Tel. +49 511 532-9574
>>>> _____________________________________
>>>> Powered by www.kitware.com
>>>>
>>>> Visit other Kitware open-source projects at
>>>> http://www.kitware.com/opensource/opensource.html
>>>>
>>>> Kitware offers ITK Training Courses, for more information visit:
>>>> http://www.kitware.com/products/protraining.php
>>>>
>>>> Please keep messages on-topic and check the ITK FAQ at:
>>>> http://www.itk.org/Wiki/ITK_FAQ
>>>>
>>>> Follow this link to subscribe/unsubscribe:
>>>> http://public.kitware.com/mailman/listinfo/insight-users
>>
>>
>> --
>> Dr. Roman Grothausmann
>>
>> Tomographie und Digitale Bildverarbeitung
>> Tomography and Digital Image Analysis
>>
>> Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
>> Medizinische Hochschule Hannover
>> Carl-Neuberg-Str. 1
>> D-30625 Hannover
>>
>> Tel. +49 511 532-9574
--
Dr. Roman Grothausmann
Tomographie und Digitale Bildverarbeitung
Tomography and Digital Image Analysis
Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
Medizinische Hochschule Hannover
Carl-Neuberg-Str. 1
D-30625 Hannover
Tel. +49 511 532-9574
From cory.quammen at kitware.com Wed Jan 28 07:54:50 2015
From: cory.quammen at kitware.com (Cory Quammen)
Date: Wed, 28 Jan 2015 07:54:50 -0500
Subject: [Paraview] Scalar bar modifications
In-Reply-To: <54C8B6A9.20003@tu-braunschweig.de>
References: <54C8B6A9.20003@tu-braunschweig.de>
Message-ID: <CAB5Fpx7wxrmpXk34s7jrkwha1gj=Dt=NVgJNU=cdV727R+VZNA@mail.gmail.com>
>
> 1. Is it possible to influence or remove the minor tick marks? He has not
> found any option to do that.
>
In ParaView 4.3, you can remove the tick marks (Draw Tick Marks) and the
minor tick marks (Draw Sub Tick Marks) in the color legend parameters
dialog. This was added recently, so it might not be in 4.1.
2. Why are the tick labels 'labels', whereas the min-max-values are
> 'annotations'? The question arose, because he wanted to change the
> numerical format, which is no problem for the labels, but he had to set an
> explicit string for the min-max-values, which is not very convenient.
>
In 4.3, the min and max are in fact tick labels instead of annotations. You
can change the format of the min-max with the (Range Label Format setting.
I hope that helps.
Cory
> He is using Paraview 4.1.
>
> Kind regards
> Ian
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/
> opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
--
Cory Quammen
R&D Engineer
Kitware, Inc.
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From david.thompson at kitware.com Wed Jan 28 11:34:37 2015
From: david.thompson at kitware.com (David Thompson)
Date: Wed, 28 Jan 2015 11:34:37 -0500
Subject: [Paraview] Writer plugin?
Message-ID: <74D8CC62-B21B-454F-B299-CD6EFF258801@kitware.com>
Hi all,
I have a ParaView plugin that contains a new writer which I would like to expose. However, while the plugin does properly expose a new view and representation, the writer does not appear to get added (when I try to save a vtkTable such as a statistics filter output, it doesn't appear as an option).
1. Is there any documentation for adding writers in plugins? This page has a comment or two but doesn't appear complete:
http://www.paraview.org/Wiki/ParaView/Plugin_HowTo
2. If you're willing to look over the XML, I've attached it below. See any mistakes?
Thanks,
David
<ServerManagerConfiguration>
<!-- Other proxy groups for views and representations here -->
<ProxyGroup name="writers">
<WriterProxy
class="vtkPJSONTableWriter"
name="PJSONTableWriter">
<Documentation>
Write tabular data to a JSON file.
</Documentation>
<InputProperty
command="SetInputConnection"
name="Input">
<DataTypeDomain
composite_data_supported="0"
name="input_type">
<DataType value="vtkTable"/>
</DataTypeDomain>
<Documentation>The input filter/source whose output dataset is to
written to the file.</Documentation>
</InputProperty>
<Hints>
<WriterFactory extensions="json" file_description="JSON tabular data" />
</Hints>
</WriterProxy>
</ProxyGroup>
</ServerManagerConfiguration>
From andy.bauer at kitware.com Wed Jan 28 11:49:00 2015
From: andy.bauer at kitware.com (Andy Bauer)
Date: Wed, 28 Jan 2015 11:49:00 -0500
Subject: [Paraview] Writer plugin?
In-Reply-To: <74D8CC62-B21B-454F-B299-CD6EFF258801@kitware.com>
References: <74D8CC62-B21B-454F-B299-CD6EFF258801@kitware.com>
Message-ID: <CAMaOp+Hm1cyjSE_psM0ebHNc_84SxnfWs0WYBp1Zs9JK7u0N1g@mail.gmail.com>
I think you may be missing the FileName property. I thought that PV looked
for that attribute to know that it should be classified as a writer. Also,
you'll want to hide that property.
So:
<StringVectorProperty name="FileName"
command="SetFileName"
number_of_elements="1"
label="File Name">
<Documentation>
The file name.
</Documentation>
</StringVectorProperty>
and:
<Hints>
<Property name="Input" show="0"/>
<Property name="FileName" show="0"/>
<WriterFactory extensions="json" file_description="JSON tabular
data" />
</Hints>
On Wed, Jan 28, 2015 at 11:34 AM, David Thompson <david.thompson at kitware.com
> wrote:
> Hi all,
>
> I have a ParaView plugin that contains a new writer which I would like to
> expose. However, while the plugin does properly expose a new view and
> representation, the writer does not appear to get added (when I try to save
> a vtkTable such as a statistics filter output, it doesn't appear as an
> option).
>
> 1. Is there any documentation for adding writers in plugins? This page has
> a comment or two but doesn't appear complete:
>
> http://www.paraview.org/Wiki/ParaView/Plugin_HowTo
>
> 2. If you're willing to look over the XML, I've attached it below. See any
> mistakes?
>
> Thanks,
> David
>
> <ServerManagerConfiguration>
> <!-- Other proxy groups for views and representations here -->
>
> <ProxyGroup name="writers">
> <WriterProxy
> class="vtkPJSONTableWriter"
> name="PJSONTableWriter">
> <Documentation>
> Write tabular data to a JSON file.
> </Documentation>
> <InputProperty
> command="SetInputConnection"
> name="Input">
> <DataTypeDomain
> composite_data_supported="0"
> name="input_type">
> <DataType value="vtkTable"/>
> </DataTypeDomain>
> <Documentation>The input filter/source whose output dataset is to
> written to the file.</Documentation>
> </InputProperty>
> <Hints>
> <WriterFactory extensions="json" file_description="JSON tabular
> data" />
> </Hints>
> </WriterProxy>
>
> </ProxyGroup>
> </ServerManagerConfiguration>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From david.thompson at kitware.com Wed Jan 28 11:54:16 2015
From: david.thompson at kitware.com (David Thompson)
Date: Wed, 28 Jan 2015 11:54:16 -0500
Subject: [Paraview] Writer plugin?
In-Reply-To: <CAMaOp+Hm1cyjSE_psM0ebHNc_84SxnfWs0WYBp1Zs9JK7u0N1g@mail.gmail.com>
References: <74D8CC62-B21B-454F-B299-CD6EFF258801@kitware.com>
<CAMaOp+Hm1cyjSE_psM0ebHNc_84SxnfWs0WYBp1Zs9JK7u0N1g@mail.gmail.com>
Message-ID: <4932C8EE-83AA-46FD-9D8C-6226733BF45B@kitware.com>
Hi Andy,
> I think you may be missing the FileName property. I thought that PV looked for that attribute to know that it should be classified as a writer. Also, you'll want to hide that property.
Adding the FileName property and hints did not work.
Thanks,
David
> So:
> <StringVectorProperty name="FileName"
> command="SetFileName"
> number_of_elements="1"
> label="File Name">
> <Documentation>
> The file name.
> </Documentation>
> </StringVectorProperty>
>
>
> and:
> <Hints>
> <Property name="Input" show="0"/>
> <Property name="FileName" show="0"/>
> <WriterFactory extensions="json" file_description="JSON tabular data" />
> </Hints>
>
>
>
>
> On Wed, Jan 28, 2015 at 11:34 AM, David Thompson <david.thompson at kitware.com> wrote:
> Hi all,
>
> I have a ParaView plugin that contains a new writer which I would like to expose. However, while the plugin does properly expose a new view and representation, the writer does not appear to get added (when I try to save a vtkTable such as a statistics filter output, it doesn't appear as an option).
>
> 1. Is there any documentation for adding writers in plugins? This page has a comment or two but doesn't appear complete:
>
> http://www.paraview.org/Wiki/ParaView/Plugin_HowTo
>
> 2. If you're willing to look over the XML, I've attached it below. See any mistakes?
>
> Thanks,
> David
>
> <ServerManagerConfiguration>
> <!-- Other proxy groups for views and representations here -->
>
> <ProxyGroup name="writers">
> <WriterProxy
> class="vtkPJSONTableWriter"
> name="PJSONTableWriter">
> <Documentation>
> Write tabular data to a JSON file.
> </Documentation>
> <InputProperty
> command="SetInputConnection"
> name="Input">
> <DataTypeDomain
> composite_data_supported="0"
> name="input_type">
> <DataType value="vtkTable"/>
> </DataTypeDomain>
> <Documentation>The input filter/source whose output dataset is to
> written to the file.</Documentation>
> </InputProperty>
> <Hints>
> <WriterFactory extensions="json" file_description="JSON tabular data" />
> </Hints>
> </WriterProxy>
>
> </ProxyGroup>
> </ServerManagerConfiguration>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
From matthew.jackson at ch.abb.com Wed Jan 28 11:21:20 2015
From: matthew.jackson at ch.abb.com (Matthew Jackson)
Date: Wed, 28 Jan 2015 16:21:20 +0000
Subject: [Paraview] Extracting blocks from a large pvd file with Python
Message-ID: <AM2PR06MB0882C3DBBE3BAFBC830804ACD8330@AM2PR06MB0882.eurprd06.prod.outlook.com>
Hello,
I am trying to use Python to extract all of the files in a pvd file with the Extract Block filter. This loop takes too much time (over a minute) for pvd files containing more than about 100 entries, and is unusable for any pvd files that are much bigger. I have run out of ideas to speed it up, and I don't know if there is a memory leak or other problem with my code, or if this is just a side effect of dealing with such large pvd files. Any help fixing or avoiding this problem would be greatly appreciated.
Here is the relevant code
inputFile = open(pvdFilePath)
lines = inputFile.readlines()
pm = servermanager.ProxyManager()
view = GetRenderView()
i = 2 # Block Indices in PVDReader object begin at 2 and are incremented by 2.
for line in lines:
words = line.split(" ")
if words[0] == "<DataSet": # Indicates this line references a .vtu file
name = words[1].split("\"")[1] # e.g. Returns 'NAME' from 'group="NAME"'
SetActiveSource(source)
ex = ExtractBlock()
ex.BlockIndices = [i]
i += 2
rep = servermanager.CreateRepresentation(ex, view)
pm.RegisterProxy("representations",name,rep)
RenameSource(name, ex)
del ex
del rep
Best Regards,
Matthew Jackson
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From matthieu.heitz at kitware.com Wed Jan 28 13:50:53 2015
From: matthieu.heitz at kitware.com (Matthieu Heitz)
Date: Wed, 28 Jan 2015 13:50:53 -0500
Subject: [Paraview] Problem with update propagation through Double Input
Programmable filter, in Animation mode
Message-ID: <CAD=br4wm2rvLgpZtfa4-UO5H9rVBWstohFa8yuTyJWC+AYApjg@mail.gmail.com>
Hi !
Here is my configuration:
I have a programmable filter that has 2 inputs:
- a vtkPolyData, which is an Animation (loaded from a series of files)
- a vtkPolyData, which is static (loaded from 1 file)
The filter takes some parameters in the 2nd input (single file), to ceate a
transform, and applies it to the other input: the current frame of polyData
that is selected by the animation.
The output is a copy of this transformed polydata
The problem, it seems, is that the update doesn't propagate through the
programmable filter when I change the frame in the Animation.
The input varies, but the output of the filter doesn't. Also, I can tell
because my programmable filter normally outputs some text, and when I
change the frame, nothing is displayed on the output Window. THe filer is
executed once when I hit apply, but isn't when I change frames.
The weird part is that it has worked only once last week, and I haven't
been able to make it work again since. I've retried the exact same
configuration as when it worked, but it still fails.
I have tried it with a single input programmable filter, with the animation
polyData as input, and this polydata transformed as an output. In that case
it works fine, the update is propagated through the programmable filter,
and both input and output change when I change frames. This means that the
problem comes from the fact that it's a double input filter.
When it worked, it was on ParaView 4.2.0, and it didn't work after. I have
tried with the latest nightly of 4.3.1, and it has never worked on that
version.
Have anyone encountered this problem, or has any ideas on how to solve it ?
Thank you very much,
Matthieu Heitz
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From martin.huartee at gmail.com Wed Jan 28 14:52:16 2015
From: martin.huartee at gmail.com (=?UTF-8?Q?Mart=C3=ADn_Huarte_E?=)
Date: Wed, 28 Jan 2015 13:52:16 -0600
Subject: [Paraview] Fwd: Visualization in ParaView/VisIt
In-Reply-To: <CAOPK35CEqrZ53uJbwWH-XLD7C8J8CHMfOqouTpkP_Kfg4Sf+yw@mail.gmail.com>
References: <CAOPK35CEqrZ53uJbwWH-XLD7C8J8CHMfOqouTpkP_Kfg4Sf+yw@mail.gmail.com>
Message-ID: <CAAzJzwWyzjisdN_OzwzwLgdHw1ZrYD=YGAXsmK6WUaEhq9=PyA@mail.gmail.com>
Dear Paraview community: Good day. I need assistance on visualizing a
matlab file? Any tips will be greatly appreciated. Thanks.
Details:
I need to visualize temperature distribution in a volume. The volume is a
wedge-like slice of a hollow cylinder (shown in the attached schematic).
The calculations are made in MATLAB. The three-dimensional matrices of the
solution (T) and the node-coordinates (X, Y and Z) are saved in a HDF5 file.
So far, I have not been able to make ParaView to visualize the result in
the actual geometry. They get the length, width and height of the volume
and simply build a cuboid out of them.
Thanks
My best, Mart?n
*Mart?n Huarte-Espinosa, Ph.D.*
*Computational Physicist - **High Performance Computing Specialist*
*linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a
<http://linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a>*
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From Joshua.Murphy at lasp.colorado.edu Wed Jan 28 15:01:30 2015
From: Joshua.Murphy at lasp.colorado.edu (Joshua Murphy)
Date: Wed, 28 Jan 2015 13:01:30 -0700
Subject: [Paraview] Super build Problem
Message-ID: <7B37CE47-6799-4D99-8904-33DA1E8153CE@lasp.colorado.edu>
I have posted this question once before, but everyone was probably busy with the 4.3.1 release? So here goes again.
I am trying to build the superbuild on the NCAR visualization cluster Caldera for development work. I need to build 4.1.0, as I have not yet had time to update my tools to the most recent release.
When I attempt to build the superbuild, I get an error building Freetype (see below).
I have not been able to figure out what is causing the build error.
I am using the gnu/4.6.4 module, the cmake/3.0.2 module, and the gmake/4.1 module.
If anyone can help, that would be great.
Thanks,
Josh
?????
[ 31%] Performing build step for 'freetype'
LD_LIBRARY_PATH = /glade/u/home/jmurphy/Developer/paraview/build/install/lib:/glade/apps/opt/gnu/4.6.4/lib64:/glade/apps/opt/gnu/lib:/glade/apps/opt/gnu/4.6.4/lib64:/glade/apps/opt/gnu/lib
libtool: compile: gcc -pedantic -ansi -fPIC -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/builds/unix -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/include -c -Wall -fPIC -DFT_CONFIG_OPTION_SYSTEM_ZLIB -DFT_CONFIG_OPTION_USE_BZIP2 "-DFT_CONFIG_CONFIG_H=<ftconfig.h>" -DFT2_BUILD_LIBRARY "-DFT_CONFIG_MODULES_H=<ftmodule.h>" /glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base/ftinit.c -fPIC -DPIC -o /glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build/.libs/ftinit.o
libtool: compile: gcc -pedantic -ansi -fPIC -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/builds/unix -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/include -c -Wall -fPIC -DFT_CONFIG_OPTION_SYSTEM_ZLIB -DFT_CONFIG_OPTION_USE_BZIP2 "-DFT_CONFIG_CONFIG_H=<ftconfig.h>" -DFT2_BUILD_LIBRARY "-DFT_CONFIG_MODULES_H=<ftmodule.h>" /glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/builds/unix/ftsystem.c -fPIC -DPIC -o /glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build/.libs/ftsystem.o
libtool: compile: gcc -pedantic -ansi -fPIC -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/builds/unix -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/include -c -Wall -fPIC -DFT_CONFIG_OPTION_SYSTEM_ZLIB -DFT_CONFIG_OPTION_USE_BZIP2 "-DFT_CONFIG_CONFIG_H=<ftconfig.h>" -DFT2_BUILD_LIBRARY "-DFT_CONFIG_MODULES_H=<ftmodule.h>" /glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base/ftdebug.c -fPIC -DPIC -o /glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build/.libs/ftdebug.o
libtool: compile: gcc -pedantic -ansi -fPIC -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/builds/unix -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/include -c -Wall -fPIC -DFT_CONFIG_OPTION_SYSTEM_ZLIB -DFT_CONFIG_OPTION_USE_BZIP2 "-DFT_CONFIG_CONFIG_H=<ftconfig.h>" -DFT2_BUILD_LIBRARY "-DFT_CONFIG_MODULES_H=<ftmodule.h>" -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base /glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base/ftbase.c -fPIC -DPIC -o /glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build/.libs/ftbase.o
libtool: compile: gcc -pedantic -ansi -fPIC -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/builds/unix -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/include -c -Wall -fPIC -DFT_CONFIG_OPTION_SYSTEM_ZLIB -DFT_CONFIG_OPTION_USE_BZIP2 "-DFT_CONFIG_CONFIG_H=<ftconfig.h>" -DFT2_BUILD_LIBRARY "-DFT_CONFIG_MODULES_H=<ftmodule.h>" -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base /glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base/ftbbox.c -fPIC -DPIC -o /glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build/.libs/ftbbox.o
/glade/apps/opt/modulefiles/ys/cmpwrappers/gcc[52]: eval[1]: -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base: cannot create [No such file or directory]
/glade/apps/opt/modulefiles/ys/cmpwrappers/gcc[52]: eval[1]: -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base: cannot create [No such file or directory]
gmake[3]: *** [/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build/ftbase.lo] Error 1
/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base/rules.mk:87: recipe for target '/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build/ftbase.lo' failed
gmake[3]: *** Waiting for unfinished jobs....
gmake[3]: *** [/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build/ftbbox.lo] Error 1
/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base/rules.mk:93: recipe for target '/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build/ftbbox.lo' failed
libtool: compile: gcc -pedantic -ansi -fPIC -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/builds/unix -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/include -c -Wall -fPIC -DFT_CONFIG_OPTION_SYSTEM_ZLIB -DFT_CONFIG_OPTION_USE_BZIP2 "-DFT_CONFIG_CONFIG_H=<ftconfig.h>" -DFT2_BUILD_LIBRARY "-DFT_CONFIG_MODULES_H=<ftmodule.h>" -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base /glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base/ftbdf.c -fPIC -DPIC -o /glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build/.libs/ftbdf.o
libtool: compile: gcc -pedantic -ansi -fPIC -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/builds/unix -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/include -c -Wall -fPIC -DFT_CONFIG_OPTION_SYSTEM_ZLIB -DFT_CONFIG_OPTION_USE_BZIP2 "-DFT_CONFIG_CONFIG_H=<ftconfig.h>" -DFT2_BUILD_LIBRARY "-DFT_CONFIG_MODULES_H=<ftmodule.h>" -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base /glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base/ftbitmap.c -fPIC -DPIC -o /glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build/.libs/ftbitmap.o
/glade/apps/opt/modulefiles/ys/cmpwrappers/gcc[52]: eval[1]: -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base: cannot create [No such file or directory]
gmake[3]: *** [/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build/ftbdf.lo] Error 1
/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base/rules.mk:93: recipe for target '/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build/ftbdf.lo' failed
/glade/apps/opt/modulefiles/ys/cmpwrappers/gcc[52]: eval[1]: -I/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base: cannot create [No such file or directory]
gmake[3]: *** [/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build/ftbitmap.lo] Error 1
/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype/src/base/rules.mk:93: recipe for target '/glade/u/home/jmurphy/Developer/paraview/build/freetype/src/freetype-build/ftbitmap.lo' failed
CMake Error at /glade/u/home/jmurphy/Developer/paraview/build/pv-freetype-build.cmake:26 (message):
Failed!!!
CMakeFiles/freetype.dir/build.make:110: recipe for target 'freetype/src/freetype-stamp/freetype-build' failed
gmake[2]: *** [freetype/src/freetype-stamp/freetype-build] Error 1
CMakeFiles/Makefile2:964: recipe for target 'CMakeFiles/freetype.dir/all' failed
gmake[1]: *** [CMakeFiles/freetype.dir/all] Error 2
Makefile:147: recipe for target 'all' failed
gmake: *** [all] Error 2
From dave.demarle at kitware.com Wed Jan 28 15:23:28 2015
From: dave.demarle at kitware.com (David E DeMarle)
Date: Wed, 28 Jan 2015 15:23:28 -0500
Subject: [Paraview] Fwd: Visualization in ParaView/VisIt
In-Reply-To: <CAAzJzwWyzjisdN_OzwzwLgdHw1ZrYD=YGAXsmK6WUaEhq9=PyA@mail.gmail.com>
References: <CAOPK35CEqrZ53uJbwWH-XLD7C8J8CHMfOqouTpkP_Kfg4Sf+yw@mail.gmail.com>
<CAAzJzwWyzjisdN_OzwzwLgdHw1ZrYD=YGAXsmK6WUaEhq9=PyA@mail.gmail.com>
Message-ID: <CANjZAi-OovSCWv_Q53sLnK6Yoa9-8RS2-xtzTLNib=fdpZ0B7A@mail.gmail.com>
You should probably write an XDMF file (
http://www.xdmf.org/index.php/Main_Page) that describes the hdf5 file. Like
a "text" file or a "binary" file, "hdf5" files can contain anything, so the
XDMF file adds a bit of helpful context.
Here is a sample xdmf file that reads in three arrays from a named hdf5
file that define the cell connectivity. coordinates, and one scalar field.
The data in this case looks like a rubix cube of 27 hexes.
<Xdmf xmlns:xi="http://www.w3.org/2003/XInclude" Version="2.2">
<Domain>
<Grid GridType="Uniform">
<Topology TopologyType="Hexahedron" Dimensions="27">
<DataItem Dimensions="27 8" NumberType="Int" Precision="8"
Format="HDF">/Users/demarle/Desktop/rubix.h5:/Data0</DataItem>
</Topology>
<Geometry GeometryType="XYZ">
<DataItem Dimensions="64 3" NumberType="Float" Precision="4"
Format="HDF">/Users/demarle/Desktop/rubix.h5:/Data1</DataItem>
</Geometry>
<Attribute Name="RTData" Active="1" AttributeType="Scalar"
Center="Node">
<DataItem Dimensions="64" NumberType="Float" Precision="4"
Format="HDF">/Users/demarle/Desktop/rubix.h5:/Data2</DataItem>
</Attribute>
</Grid>
</Domain>
</Xdmf>
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909
On Wed, Jan 28, 2015 at 2:52 PM, Mart?n Huarte E <martin.huartee at gmail.com>
wrote:
> Dear Paraview community: Good day. I need assistance on visualizing a
> matlab file? Any tips will be greatly appreciated. Thanks.
>
>
> Details:
> I need to visualize temperature distribution in a volume. The volume is a
> wedge-like slice of a hollow cylinder (shown in the attached schematic).
>
> The calculations are made in MATLAB. The three-dimensional matrices of
> the solution (T) and the node-coordinates (X, Y and Z) are saved in a HDF5
> file.
>
> So far, I have not been able to make ParaView to visualize the result in
> the actual geometry. They get the length, width and height of the volume
> and simply build a cuboid out of them.
>
> Thanks
>
> My best, Mart?n
>
>
> *Mart?n Huarte-Espinosa, Ph.D.*
> *Computational Physicist - **High Performance Computing Specialist*
> *linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a
> <http://linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a>*
>
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From dkxls23 at gmail.com Wed Jan 28 15:30:00 2015
From: dkxls23 at gmail.com (Armin Wehrfritz)
Date: Wed, 28 Jan 2015 22:30:00 +0200
Subject: [Paraview] Fwd: Visualization in ParaView/VisIt
In-Reply-To: <CAAzJzwWyzjisdN_OzwzwLgdHw1ZrYD=YGAXsmK6WUaEhq9=PyA@mail.gmail.com>
References: <CAOPK35CEqrZ53uJbwWH-XLD7C8J8CHMfOqouTpkP_Kfg4Sf+yw@mail.gmail.com>
<CAAzJzwWyzjisdN_OzwzwLgdHw1ZrYD=YGAXsmK6WUaEhq9=PyA@mail.gmail.com>
Message-ID: <54C946C8.5090104@gmail.com>
For such kind of data I typically write a custom made XDMF [1] file.
XDMF is basically a XML wrapper that contains the description of the
HDF5 data file.
What comes in handy in your cases, is that you have the heavy data
already in a HDF5 file.
I typically write the XDMF file with a hand crafted python script since
I typically deal with data sets from various source.
However, there is also a XDMF library [2,3], which should provide some
convenient advantages.
The XDMF file format is very well supported by ParaView, or VisIt for
that matter.
I attached 2 XDMF files, so you get an idea what I'm talking of (the
HDF5 data files are missing though).
-Armin
[1] http://www.xdmf.org/index.php/Main_Page
[2] http://www.xdmf.org/index.php/Get_Xdmf
[3] http://www.xdmf.org/index.php/Write_Xdmf
On 01/28/2015 09:52 PM, Mart?n Huarte E wrote:
> Dear Paraview community: Good day. I need assistance on visualizing a
> matlab file? Any tips will be greatly appreciated. Thanks.
>
>
> Details:
> I need to visualize temperature distribution in a volume. The volume is
> a wedge-like slice of a hollow cylinder (shown in the attached schematic).
>
> The calculations are made in MATLAB. The three-dimensional matrices of
> the solution (T) and the node-coordinates (X, Y and Z) are saved in a
> HDF5 file.
>
> So far, I have not been able to make ParaView to visualize the result in
> the actual geometry. They get the length, width and height of the volume
> and simply build a cuboid out of them.
>
> Thanks
>
> My best, Mart?n
> __
> /Mart?n Huarte-Espinosa, Ph.D./
> /Computational Physicist - //High Performance Computing Specialist/
> /linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a
> <http://linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a>/
>
>
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From martin.huartee at gmail.com Wed Jan 28 15:55:15 2015
From: martin.huartee at gmail.com (Martin Huarte Espinosa)
Date: Wed, 28 Jan 2015 14:55:15 -0600
Subject: [Paraview] Fwd: Visualization in ParaView/VisIt
Message-ID: <CABY5g+sZYVEPawFvVifm_rUL=nNdRKjkxJ0hKFUN9uvoogYqPg@mail.gmail.com>
Dear Armin and Dave: thanks for your replies. I will try.
Martin.
On Wed, Jan 28, 2015 at 2:30 PM, Armin Wehrfritz <dkxls23 at gmail.com> wrote:
> For such kind of data I typically write a custom made XDMF [1] file. XDMF
> is basically a XML wrapper that contains the description of the HDF5 data
> file.
> What comes in handy in your cases, is that you have the heavy data already
> in a HDF5 file.
>
> I typically write the XDMF file with a hand crafted python script since I
> typically deal with data sets from various source.
> However, there is also a XDMF library [2,3], which should provide some
> convenient advantages.
>
> The XDMF file format is very well supported by ParaView, or VisIt for that
> matter.
>
> I attached 2 XDMF files, so you get an idea what I'm talking of (the HDF5
> data files are missing though).
>
> -Armin
>
> [1] http://www.xdmf.org/index.php/Main_Page
> [2] http://www.xdmf.org/index.php/Get_Xdmf
> [3] http://www.xdmf.org/index.php/Write_Xdmf
>
>
>
> On 01/28/2015 09:52 PM, Mart?n Huarte E wrote:
>
>> Dear Paraview community: Good day. I need assistance on visualizing a
>> matlab file? Any tips will be greatly appreciated. Thanks.
>>
>>
>> Details:
>> I need to visualize temperature distribution in a volume. The volume is
>> a wedge-like slice of a hollow cylinder (shown in the attached schematic).
>>
>> The calculations are made in MATLAB. The three-dimensional matrices of
>> the solution (T) and the node-coordinates (X, Y and Z) are saved in a
>> HDF5 file.
>>
>> So far, I have not been able to make ParaView to visualize the result in
>> the actual geometry. They get the length, width and height of the volume
>> and simply build a cuboid out of them.
>>
>> Thanks
>>
>> My best, Mart?n
>> __
>> /Mart?n Huarte-Espinosa, Ph.D./
>> /Computational Physicist - //High Performance Computing Specialist/
>> /linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a
>> <http://linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a>/
>>
>>
>>
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at http://www.kitware.com/
>> opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
--
My best, Mart?n
*Mart?n Huarte-Espinosa, Ph.D.*
*Computational Physicist - **High Performance Computing Specialist*
*linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a
<http://linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a>*
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From i.krukow at tu-braunschweig.de Wed Jan 28 16:36:38 2015
From: i.krukow at tu-braunschweig.de (Ian Krukow)
Date: Wed, 28 Jan 2015 22:36:38 +0100
Subject: [Paraview] Scalar bar modifications
In-Reply-To: <CAB5Fpx7wxrmpXk34s7jrkwha1gj=Dt=NVgJNU=cdV727R+VZNA@mail.gmail.com>
References: <54C8B6A9.20003@tu-braunschweig.de>
<CAB5Fpx7wxrmpXk34s7jrkwha1gj=Dt=NVgJNU=cdV727R+VZNA@mail.gmail.com>
Message-ID: <54C95666.4000807@tu-braunschweig.de>
Exactly, what we were looking for.
Thanks a lot!
Ian
Am 28.01.2015 um 13:54 schrieb Cory Quammen:
> 1. Is it possible to influence or remove the minor tick marks? He
> has not found any option to do that.
>
>
> In ParaView 4.3, you can remove the tick marks (Draw Tick Marks) and the
> minor tick marks (Draw Sub Tick Marks) in the color legend parameters
> dialog. This was added recently, so it might not be in 4.1.
>
> 2. Why are the tick labels 'labels', whereas the min-max-values are
> 'annotations'? The question arose, because he wanted to change the
> numerical format, which is no problem for the labels, but he had to
> set an explicit string for the min-max-values, which is not very
> convenient.
>
>
> In 4.3, the min and max are in fact tick labels instead of annotations.
> You can change the format of the min-max with the (Range Label Format
> setting.
>
> I hope that helps.
>
> Cory
>
>
> He is using Paraview 4.1.
>
> Kind regards
> Ian
> _________________________________________________
> Powered by www.kitware.com <http://www.kitware.com>
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/__opensource/opensource.html
> <http://www.kitware.com/opensource/opensource.html>
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/__ParaView <http://paraview.org/Wiki/ParaView>
>
> Search the list archives at:
> http://markmail.org/search/?q=__ParaView
> <http://markmail.org/search/?q=ParaView>
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/__mailman/listinfo/paraview
> <http://public.kitware.com/mailman/listinfo/paraview>
>
>
>
>
> --
> Cory Quammen
> R&D Engineer
> Kitware, Inc.
From david.thompson at kitware.com Wed Jan 28 18:08:29 2015
From: david.thompson at kitware.com (David Thompson)
Date: Wed, 28 Jan 2015 18:08:29 -0500
Subject: [Paraview] Writer plugin?
In-Reply-To: <54C96ACB.8060801@lbl.gov>
References: <74D8CC62-B21B-454F-B299-CD6EFF258801@kitware.com>
<CAMaOp+Hm1cyjSE_psM0ebHNc_84SxnfWs0WYBp1Zs9JK7u0N1g@mail.gmail.com>
<4932C8EE-83AA-46FD-9D8C-6226733BF45B@kitware.com> <54C96ACB.8060801@lbl.gov>
Message-ID: <2412D55F-DFCD-4EAE-92C4-111BFA16DFDF@kitware.com>
Hi Burlen,
> The WriterProxy may have a special "file_name_method" attribute that needs to be set. I'm not sure if that's required, optional, or long since obsolete since I haven't used our plugin in quite a while.
I did see the "file_name_method" (and "supports_parallel" and "parallel_only") attribute, but not all of the writers have it. When I add it, nothing happens.
Thanks,
David
>
> 13 <WriterProxy name="vtkSQBOVWriter"
> 14 class="vtkSQBOVWriter"
> 15 file_name_method="SetFileName"
> 16 supports_parallel="1">
>
> On 1/28/2015 8:54 AM, David Thompson wrote:
>> Hi Andy,
>>
>>> I think you may be missing the FileName property. I thought that PV looked for that attribute to know that it should be classified as a writer. Also, you'll want to hide that property.
>> Adding the FileName property and hints did not work.
>>
>> Thanks,
>> David
>>
>>> So:
>>> <StringVectorProperty name="FileName"
>>> command="SetFileName"
>>> number_of_elements="1"
>>> label="File Name">
>>> <Documentation>
>>> The file name.
>>> </Documentation>
>>> </StringVectorProperty>
>>>
>>>
>>> and:
>>> <Hints>
>>> <Property name="Input" show="0"/>
>>> <Property name="FileName" show="0"/>
>>> <WriterFactory extensions="json" file_description="JSON tabular data" />
>>> </Hints>
>>>
>>>
>>>
>>>
>>> On Wed, Jan 28, 2015 at 11:34 AM, David Thompson <david.thompson at kitware.com> wrote:
>>> Hi all,
>>>
>>> I have a ParaView plugin that contains a new writer which I would like to expose. However, while the plugin does properly expose a new view and representation, the writer does not appear to get added (when I try to save a vtkTable such as a statistics filter output, it doesn't appear as an option).
>>>
>>> 1. Is there any documentation for adding writers in plugins? This page has a comment or two but doesn't appear complete:
>>>
>>> http://www.paraview.org/Wiki/ParaView/Plugin_HowTo
>>>
>>> 2. If you're willing to look over the XML, I've attached it below. See any mistakes?
>>>
>>> Thanks,
>>> David
>>>
>>> <ServerManagerConfiguration>
>>> <!-- Other proxy groups for views and representations here -->
>>>
>>> <ProxyGroup name="writers">
>>> <WriterProxy
>>> class="vtkPJSONTableWriter"
>>> name="PJSONTableWriter">
>>> <Documentation>
>>> Write tabular data to a JSON file.
>>> </Documentation>
>>> <InputProperty
>>> command="SetInputConnection"
>>> name="Input">
>>> <DataTypeDomain
>>> composite_data_supported="0"
>>> name="input_type">
>>> <DataType value="vtkTable"/>
>>> </DataTypeDomain>
>>> <Documentation>The input filter/source whose output dataset is to
>>> written to the file.</Documentation>
>>> </InputProperty>
>>> <Hints>
>>> <WriterFactory extensions="json" file_description="JSON tabular data" />
>>> </Hints>
>>> </WriterProxy>
>>>
>>> </ProxyGroup>
>>> </ServerManagerConfiguration>
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>
From bloring at lbl.gov Wed Jan 28 18:03:39 2015
From: bloring at lbl.gov (Burlen Loring)
Date: Wed, 28 Jan 2015 15:03:39 -0800
Subject: [Paraview] Writer plugin?
In-Reply-To: <4932C8EE-83AA-46FD-9D8C-6226733BF45B@kitware.com>
References: <74D8CC62-B21B-454F-B299-CD6EFF258801@kitware.com>
<CAMaOp+Hm1cyjSE_psM0ebHNc_84SxnfWs0WYBp1Zs9JK7u0N1g@mail.gmail.com>
<4932C8EE-83AA-46FD-9D8C-6226733BF45B@kitware.com>
Message-ID: <54C96ACB.8060801@lbl.gov>
The WriterProxy may have a special "file_name_method" attribute that
needs to be set. I'm not sure if that's required, optional, or long
since obsolete since I haven't used our plugin in quite a while.
13 <WriterProxy name="vtkSQBOVWriter"
14 class="vtkSQBOVWriter"
15 file_name_method="SetFileName"
16 supports_parallel="1">
On 1/28/2015 8:54 AM, David Thompson wrote:
> Hi Andy,
>
>> I think you may be missing the FileName property. I thought that PV looked for that attribute to know that it should be classified as a writer. Also, you'll want to hide that property.
> Adding the FileName property and hints did not work.
>
> Thanks,
> David
>
>> So:
>> <StringVectorProperty name="FileName"
>> command="SetFileName"
>> number_of_elements="1"
>> label="File Name">
>> <Documentation>
>> The file name.
>> </Documentation>
>> </StringVectorProperty>
>>
>>
>> and:
>> <Hints>
>> <Property name="Input" show="0"/>
>> <Property name="FileName" show="0"/>
>> <WriterFactory extensions="json" file_description="JSON tabular data" />
>> </Hints>
>>
>>
>>
>>
>> On Wed, Jan 28, 2015 at 11:34 AM, David Thompson <david.thompson at kitware.com> wrote:
>> Hi all,
>>
>> I have a ParaView plugin that contains a new writer which I would like to expose. However, while the plugin does properly expose a new view and representation, the writer does not appear to get added (when I try to save a vtkTable such as a statistics filter output, it doesn't appear as an option).
>>
>> 1. Is there any documentation for adding writers in plugins? This page has a comment or two but doesn't appear complete:
>>
>> http://www.paraview.org/Wiki/ParaView/Plugin_HowTo
>>
>> 2. If you're willing to look over the XML, I've attached it below. See any mistakes?
>>
>> Thanks,
>> David
>>
>> <ServerManagerConfiguration>
>> <!-- Other proxy groups for views and representations here -->
>>
>> <ProxyGroup name="writers">
>> <WriterProxy
>> class="vtkPJSONTableWriter"
>> name="PJSONTableWriter">
>> <Documentation>
>> Write tabular data to a JSON file.
>> </Documentation>
>> <InputProperty
>> command="SetInputConnection"
>> name="Input">
>> <DataTypeDomain
>> composite_data_supported="0"
>> name="input_type">
>> <DataType value="vtkTable"/>
>> </DataTypeDomain>
>> <Documentation>The input filter/source whose output dataset is to
>> written to the file.</Documentation>
>> </InputProperty>
>> <Hints>
>> <WriterFactory extensions="json" file_description="JSON tabular data" />
>> </Hints>
>> </WriterProxy>
>>
>> </ProxyGroup>
>> </ServerManagerConfiguration>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
From thomas.fastl at kcl.ac.uk Wed Jan 28 18:49:23 2015
From: thomas.fastl at kcl.ac.uk (Fastl, Thomas)
Date: Wed, 28 Jan 2015 23:49:23 +0000
Subject: [Paraview] Glyphs/Streamlines
Message-ID: <1422488962755.52852@kcl.ac.uk>
Hello Community,
I am trying to view a vector field (one vector at each vertex stored as 'Point Data') in Paraview 4.2.0 using the 'Glyph' filter. After application of the filter and using the Glyph Type 'Line' I tried to scale these lines (all vectors are unity vectors) in length and diameter, but I haven't found this property and think that this has been possible in older versions. Is this still possible in Paraview 4.2.0?
Beside that I was trying to create streamlines from my static vector field. I tried 'Stream Tracer', but that didn't display any result in my case. Can anybody give me a hint on how to start working on that since I have never been doing this, thanks.
Kind regards,
___________________________
DI Thomas E Fastl, BSc
Research Student
King's College London
School of Medicine
Department of Biomedical Engineering
The Rayne Institute
4th Floor, Lambeth Wing
St Thomas' Hospital, London SE1 7EH
Email: thomas.fastl at kcl.ac.uk<mailto://thomas.fastl at kcl.ac.uk>
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From dave.demarle at kitware.com Wed Jan 28 19:12:47 2015
From: dave.demarle at kitware.com (David E DeMarle)
Date: Wed, 28 Jan 2015 19:12:47 -0500
Subject: [Paraview] Glyphs/Streamlines
In-Reply-To: <1422488962755.52852@kcl.ac.uk>
References: <1422488962755.52852@kcl.ac.uk>
Message-ID: <CANjZAi-i4OKMZhw+E_1aTSEDkYo7w5yWKWJav-CabDwO5eYrvw@mail.gmail.com>
Quick suggestions:
1 Click the gear icon or use the search field to find the glyph scaling in
the advanced properties.
2 Apply the point to cell filter to spread the vector field throughout
space so that the the advection algorithm sees values to move by.
On Wednesday, January 28, 2015, Fastl, Thomas <thomas.fastl at kcl.ac.uk>
wrote:
> Hello Community,
>
>
> I am trying to view a vector field (one vector at each vertex stored as
> 'Point Data') in Paraview 4.2.0 using the 'Glyph' filter. After application
> of the filter and using the Glyph Type 'Line' I tried to scale these lines
> (all vectors are unity vectors) in length and diameter, but I haven't found
> this property and think that this has been possible in older versions. Is
> this still possible in Paraview 4.2.0?
>
>
> Beside that I was trying to create streamlines from my static vector
> field. I tried 'Stream Tracer', but that didn't display any result in my
> case. Can anybody give me a hint on how to start working on that since I
> have never been doing this, thanks.
>
>
> Kind regards,
> ___________________________
> DI Thomas E Fastl, BSc
> Research Student
> King's College London
> School of Medicine
> Department of Biomedical Engineering
>
> The Rayne Institute
> 4th Floor, Lambeth Wing
> St Thomas' Hospital, London SE1 7EH
> Email: thomas.fastl at kcl.ac.uk
> <javascript:_e(%7B%7D,'cvml','//thomas.fastl at kcl.ac.uk');>
>
>
--
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909
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From omid.mahabadi at geomechanica.com Wed Jan 28 19:27:48 2015
From: omid.mahabadi at geomechanica.com (Omid Mahabadi)
Date: Wed, 28 Jan 2015 19:27:48 -0500
Subject: [Paraview] ParaView Seg Faults when running Animation in a
Programmable Filter
Message-ID: <54C97E84.80003@geomechanica.com>
Hi,
I've been experiencing a very weird seg faults in various versions of
ParaView (4.1.x, 4.2.0, 4.3.x) when running an animation (streaming over
time) of my Programmable Filter. I'm not even sure this is a ParaView
issue, but I'll still share my story in case someone has any insights
that they can kindly share.
My Programmable Filter code works fine for the Current time step,
regardless at which time step I run it (i.e., hit the Apply button of
the Programmable Filter). However, when I hit the Play button to loop
over time steps (which appends some information to a CSV file), ParaView
seg faults after reaching the /3rd time step/. The filter has been
working for some time and this started to happen all of a sudden,
without any system update.
It may be related to a weird combination of hardware, software, and
drivers. My script works fine on a desktop computer I have but it seg
faults on my main workstation, which has an AMD/ATI Radeon R9 280x GPU
running on Linux Mint 15, 64-bit. When I completely removed the AMD
drivers, it still seg faulted but after reaching the /6th time step/
after the current one. Then, I launched an Ubuntu 14.04 LTS 64-bit, live
on a USB flash drive. The script in Programmable Filter worked perfectly
fine. As a result, I installed the OS, but it acted up exactly as the
Linux Mint installation.
The input files are massive vtk unstructured grids (about 800 MB each).
I created smaller files, but unfortunately I couldn't reproduce the
error. But I'm fairly sure that the files are not corrupted. As such, I
can't send out the files that cause the issue. I also monitored the
memory usage using free -h command while Playing. Here's the output for
the "-/+ buffers/cache" line:
total used free
-/+ buffers/cache: 7.2G 8.4G (Opening the .vtu files)
-/+ buffers/cache: 7.2G 8.4G
-/+ buffers/cache: 7.4G 8.2G
-/+ buffers/cache: 7.6G 8.0G
-/+ buffers/cache: 7.6G 8.0G
-/+ buffers/cache: 7.6G 8.0G
-/+ buffers/cache: 7.9G 7.7G
-/+ buffers/cache: 8.3G 7.4G
-/+ buffers/cache: 8.5G 7.1G
-/+ buffers/cache: 8.6G 7.0G
-/+ buffers/cache: 8.5G 7.1G
-/+ buffers/cache: 8.5G 7.1G
-/+ buffers/cache: 8.5G 7.1G
-/+ buffers/cache: 8.5G 7.1G
-/+ buffers/cache: 8.6G 7.0G
-/+ buffers/cache: 8.9G 6.7G
-/+ buffers/cache: 9.1G 6.5G
-/+ buffers/cache: 9.3G 6.3G
-/+ buffers/cache: 9.4G 6.2G (Seg faults here)
-/+ buffers/cache: 7.0G 8.6G
As you can see, my system still had a lot of free memory when the seg
fault happened and I haven't done anything explicitly to limit memory
usage by a single process.
Looking at syslog, this is the error message for the seg fault:
kernel: [77995.911073] paraview[22483]: segfault at 7f3c8e0398ac ip
00007f3a47ebe169 sp 00007fff9106ab50 error 4 in
fglrx_dri.so[7f3a479e9000+21e9000]
Am I missing something here? Is there any other debugging steps I should
take? Any insights or help will be hugely appreciated.
Thank you,
Omid
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From ceccon at poli.ufrj.br Thu Jan 29 05:27:14 2015
From: ceccon at poli.ufrj.br (Pedro Ceccon Thurler)
Date: Thu, 29 Jan 2015 08:27:14 -0200
Subject: [Paraview] Average data from multiple nodes
In-Reply-To: <0b2faf9e0c1d4697844feeef84eef2cc@ES05AMSNLNT.srn.sandia.gov>
References: <0b2faf9e0c1d4697844feeef84eef2cc@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <CABX6FTxB9msv91QmGOMdS_9T3gAWOWkowFfrP3=_tkU7nS51Og@mail.gmail.com>
Alan, I'm a beginner user of paraview. I don't know if there is such tool,
but I think you can do that other way.
You can plot all the variables you want for each point and, then, export to
a csv file.
After you do that, you can manipulate the numbers the way you want, so you
can take all that values to a same sheet and average than.
With this average, you can plot using Excel or some other software.
I hope I've been clear enough.
Att.
Pedro Ceccon Thurler
Bolsista CNPq - Laborat?rio de Simula??o de Sistemas de Constru??o Naval
Departamento de Engenharia Naval e Oce?nica - UFRJ
Cel: (21) 9 8234-9794
2015-01-23 18:44 GMT-02:00 Scott, W Alan <wascott at sandia.gov>:
> I was wondering if there was a tool that could average values from
> multiple nodes and plot that over time. For example, I would like to take
> a selection of nodes, average their velocities, and plot that vs. time.
>
> Thanks for the help.
>
> Alan
>
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From biddisco at cscs.ch Thu Jan 29 07:13:33 2015
From: biddisco at cscs.ch (Biddiscombe, John A.)
Date: Thu, 29 Jan 2015 12:13:33 +0000
Subject: [Paraview] Writer plugin?
In-Reply-To: <74D8CC62-B21B-454F-B299-CD6EFF258801@kitware.com>
References: <74D8CC62-B21B-454F-B299-CD6EFF258801@kitware.com>
Message-ID: <50320452A334BD42A5EC72BAD214509924EC0FF3@MBX110.d.ethz.ch>
David
I used to make my writers the same as filters and even allow them to shallow copy their input to the output. Then in paraview they can appear in the filters menu and can be inserted in the middle of a pipeline and each time a render is activated, the writer would be triggered. (I used it for saving particles out from animations of advected flows). (you can check if the timestep has changed or other stuff is different and skip writes if necessary).
Adding the writer as a filter is an easy option!
JB
-----Original Message-----
From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of David Thompson
Sent: 28 January 2015 17:35
To: ParaView
Subject: [Paraview] Writer plugin?
Hi all,
I have a ParaView plugin that contains a new writer which I would like to expose. However, while the plugin does properly expose a new view and representation, the writer does not appear to get added (when I try to save a vtkTable such as a statistics filter output, it doesn't appear as an option).
1. Is there any documentation for adding writers in plugins? This page has a comment or two but doesn't appear complete:
http://www.paraview.org/Wiki/ParaView/Plugin_HowTo
2. If you're willing to look over the XML, I've attached it below. See any mistakes?
Thanks,
David
<ServerManagerConfiguration>
<!-- Other proxy groups for views and representations here -->
<ProxyGroup name="writers">
<WriterProxy
class="vtkPJSONTableWriter"
name="PJSONTableWriter">
<Documentation>
Write tabular data to a JSON file.
</Documentation>
<InputProperty
command="SetInputConnection"
name="Input">
<DataTypeDomain
composite_data_supported="0"
name="input_type">
<DataType value="vtkTable"/>
</DataTypeDomain>
<Documentation>The input filter/source whose output dataset is to
written to the file.</Documentation>
</InputProperty>
<Hints>
<WriterFactory extensions="json" file_description="JSON tabular data" />
</Hints>
</WriterProxy>
</ProxyGroup>
</ServerManagerConfiguration>
_______________________________________________
Powered by www.kitware.com
Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
Search the list archives at: http://markmail.org/search/?q=ParaView
Follow this link to subscribe/unsubscribe:
http://public.kitware.com/mailman/listinfo/paraview
From dave.demarle at kitware.com Thu Jan 29 09:24:46 2015
From: dave.demarle at kitware.com (David E DeMarle)
Date: Thu, 29 Jan 2015 09:24:46 -0500
Subject: [Paraview] Writer plugin?
In-Reply-To: <50320452A334BD42A5EC72BAD214509924EC0FF3@MBX110.d.ethz.ch>
References: <74D8CC62-B21B-454F-B299-CD6EFF258801@kitware.com>
<50320452A334BD42A5EC72BAD214509924EC0FF3@MBX110.d.ethz.ch>
Message-ID: <CANjZAi8zwraCVfGs=j3Xz3Xf=gGRW8rmmqR8CTadgbrqF6yFJg@mail.gmail.com>
<InputProperty name="Input" command="SetInputConnection">
<ProxyGroupDomain name="groups">
<Group name="sources"/>
<Group name="filters"/>
</ProxyGroupDomain>
?
David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909
On Thu, Jan 29, 2015 at 7:13 AM, Biddiscombe, John A. <biddisco at cscs.ch>
wrote:
> David
>
> I used to make my writers the same as filters and even allow them to
> shallow copy their input to the output. Then in paraview they can appear in
> the filters menu and can be inserted in the middle of a pipeline and each
> time a render is activated, the writer would be triggered. (I used it for
> saving particles out from animations of advected flows). (you can check if
> the timestep has changed or other stuff is different and skip writes if
> necessary).
>
> Adding the writer as a filter is an easy option!
>
> JB
>
> -----Original Message-----
> From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of David
> Thompson
> Sent: 28 January 2015 17:35
> To: ParaView
> Subject: [Paraview] Writer plugin?
>
> Hi all,
>
> I have a ParaView plugin that contains a new writer which I would like to
> expose. However, while the plugin does properly expose a new view and
> representation, the writer does not appear to get added (when I try to save
> a vtkTable such as a statistics filter output, it doesn't appear as an
> option).
>
> 1. Is there any documentation for adding writers in plugins? This page has
> a comment or two but doesn't appear complete:
>
> http://www.paraview.org/Wiki/ParaView/Plugin_HowTo
>
> 2. If you're willing to look over the XML, I've attached it below. See any
> mistakes?
>
> Thanks,
> David
>
> <ServerManagerConfiguration>
> <!-- Other proxy groups for views and representations here -->
>
> <ProxyGroup name="writers">
> <WriterProxy
> class="vtkPJSONTableWriter"
> name="PJSONTableWriter">
> <Documentation>
> Write tabular data to a JSON file.
> </Documentation>
> <InputProperty
> command="SetInputConnection"
> name="Input">
> <DataTypeDomain
> composite_data_supported="0"
> name="input_type">
> <DataType value="vtkTable"/>
> </DataTypeDomain>
> <Documentation>The input filter/source whose output dataset is to
> written to the file.</Documentation>
> </InputProperty>
> <Hints>
> <WriterFactory extensions="json" file_description="JSON tabular
> data" />
> </Hints>
> </WriterProxy>
>
> </ProxyGroup>
> </ServerManagerConfiguration>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From ben.boeckel at kitware.com Thu Jan 29 10:11:01 2015
From: ben.boeckel at kitware.com (Ben Boeckel)
Date: Thu, 29 Jan 2015 10:11:01 -0500
Subject: [Paraview] [Paraview-developers] Super build Problem
In-Reply-To: <7B37CE47-6799-4D99-8904-33DA1E8153CE@lasp.colorado.edu>
References: <7B37CE47-6799-4D99-8904-33DA1E8153CE@lasp.colorado.edu>
Message-ID: <20150129151101.GA3908@megas.kitwarein.com>
On Wed, Jan 28, 2015 at 13:01:30 -0700, Joshua Murphy wrote:
> I have posted this question once before, but everyone was probably
> busy with the 4.3.1 release? So here goes again.
>
> I am trying to build the superbuild on the NCAR visualization cluster
> Caldera for development work. I need to build 4.1.0, as I have not
> yet had time to update my tools to the most recent release.
>
> When I attempt to build the superbuild, I get an error building
> Freetype (see below).
>
> I have not been able to figure out what is causing the build error.
>
> I am using the gnu/4.6.4 module, the cmake/3.0.2 module, and the
> gmake/4.1 module.
>
> If anyone can help, that would be great.
What branch of the superbuild are you using? Are you using the 4.1.0 tag
in the repository?
At a guess, it looks like the targets are out-of-order since it looks
like output directories aren't being created? Is this a parallel or
serial build?
--Ben
From Anton.Piccardo-Selg at tessella.com Thu Jan 29 10:18:57 2015
From: Anton.Piccardo-Selg at tessella.com (Anton.Piccardo-Selg at tessella.com)
Date: Thu, 29 Jan 2015 15:18:57 +0000
Subject: [Paraview] Issue with invisible source and deleting filter.
Message-ID: <OFAC0002B7.8DB9067D-ON80257DDC.00542217-80257DDC.00542219@tessella.co.uk>
An HTML attachment was scrubbed...
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From mvanmoer at illinois.edu Thu Jan 29 10:30:59 2015
From: mvanmoer at illinois.edu (Vanmoer, Mark W)
Date: Thu, 29 Jan 2015 15:30:59 +0000
Subject: [Paraview] Multiple scalar dropdown menus in object panel, PV 3.14.1
Message-ID: <7F781841FF1E044388AFA42B70703A7A8A0E8B9D@CHIMBX6.ad.uillinois.edu>
Hi Paraview,
This is for a ParaView 3.14.1 plugin. I have an object panel gui with two dropdown menus for selecting scalars. I tried following the example from this older list thread:
http://public.kitware.com/pipermail/paraview-developers/2011-February/000947.html
The menus show up correctly in the object panel, and are populated with the expected scalar names. However, only one of the scalars is getting placed into the inputVector because inside RequestData, The second call to GetInputArrayToProcess is returning null. I have
vtkDataArray* scalar1 = this->GetInputArrayToProcess(0, inputVector);
vtkDataArray* scalar2 = this->GetInputArrayToProcess(1, inputVector);
scalar2 is 0x0.
I'm not very experienced with the GUI side of ParaView, so I feel like I'm missing something. I'm just writing a servermanager XML because the autogenerated layout is fine. Do I still need to do additional Qt code in order to grab that second scalar?
Thanks,
Mark
From dkxls23 at gmail.com Thu Jan 29 10:43:24 2015
From: dkxls23 at gmail.com (Armin Wehrfritz)
Date: Thu, 29 Jan 2015 17:43:24 +0200
Subject: [Paraview] Fwd: Visualization in ParaView/VisIt
In-Reply-To: <CABY5g+sZYVEPawFvVifm_rUL=nNdRKjkxJ0hKFUN9uvoogYqPg@mail.gmail.com>
References: <CABY5g+sZYVEPawFvVifm_rUL=nNdRKjkxJ0hKFUN9uvoogYqPg@mail.gmail.com>
Message-ID: <54CA551C.5010306@gmail.com>
I just stumbled across this interesting blog:
http://berkgeveci.github.io/2015/01/08/h5py-writer-reader/
If you have some kind of python knowledge, especially the "HDF5Reader"
part should be very interesting for you.
For this you don't even need the XDMF files.
-Armin
On 01/28/2015 10:55 PM, Martin Huarte Espinosa wrote:
> Dear Armin and Dave: thanks for your replies. I will try.
>
> Martin.
>
> On Wed, Jan 28, 2015 at 2:30 PM, Armin Wehrfritz <dkxls23 at gmail.com
> <mailto:dkxls23 at gmail.com>> wrote:
>
> For such kind of data I typically write a custom made XDMF [1] file.
> XDMF is basically a XML wrapper that contains the description of the
> HDF5 data file.
> What comes in handy in your cases, is that you have the heavy data
> already in a HDF5 file.
>
> I typically write the XDMF file with a hand crafted python script
> since I typically deal with data sets from various source.
> However, there is also a XDMF library [2,3], which should provide
> some convenient advantages.
>
> The XDMF file format is very well supported by ParaView, or VisIt
> for that matter.
>
> I attached 2 XDMF files, so you get an idea what I'm talking of (the
> HDF5 data files are missing though).
>
> -Armin
>
> [1] http://www.xdmf.org/index.php/__Main_Page
> <http://www.xdmf.org/index.php/Main_Page>
> [2] http://www.xdmf.org/index.php/__Get_Xdmf
> <http://www.xdmf.org/index.php/Get_Xdmf>
> [3] http://www.xdmf.org/index.php/__Write_Xdmf
> <http://www.xdmf.org/index.php/Write_Xdmf>
>
>
>
> On 01/28/2015 09:52 PM, Mart?n Huarte E wrote:
>
> Dear Paraview community: Good day. I need assistance on
> visualizing a
> matlab file? Any tips will be greatly appreciated. Thanks.
>
>
> Details:
> I need to visualize temperature distribution in a volume. The
> volume is
> a wedge-like slice of a hollow cylinder (shown in the attached
> schematic).
>
> The calculations are made in MATLAB. The three-dimensional
> matrices of
> the solution (T) and the node-coordinates (X, Y and Z) are saved
> in a
> HDF5 file.
>
> So far, I have not been able to make ParaView to visualize the
> result in
> the actual geometry. They get the length, width and height of
> the volume
> and simply build a cuboid out of them.
>
> Thanks
>
> My best, Mart?n
> __
> /Mart?n Huarte-Espinosa, Ph.D./
> /Computational Physicist - //High Performance Computing Specialist/
> /linkedin.com/pub/martin-__huarte-espinosa/59/6b7/13a
> <http://linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a>
> <http://linkedin.com/pub/__martin-huarte-espinosa/59/6b7/__13a
> <http://linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a>>/
>
>
>
>
>
> _________________________________________________
> Powered by www.kitware.com <http://www.kitware.com>
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/__opensource/opensource.html
> <http://www.kitware.com/opensource/opensource.html>
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/__ParaView
> <http://paraview.org/Wiki/ParaView>
>
> Search the list archives at:
> http://markmail.org/search/?q=__ParaView
> <http://markmail.org/search/?q=ParaView>
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/__mailman/listinfo/paraview
> <http://public.kitware.com/mailman/listinfo/paraview>
>
>
> _______________________________________________
> Powered by www.kitware.com <http://www.kitware.com>
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
>
>
> --
>
> My best, Mart?n
> __
> /Mart?n Huarte-Espinosa, Ph.D./
> /Computational Physicist - //High Performance Computing Specialist/
> /linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a
> <http://linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a>/
From david.thompson at kitware.com Thu Jan 29 12:51:00 2015
From: david.thompson at kitware.com (David Thompson)
Date: Thu, 29 Jan 2015 12:51:00 -0500
Subject: [Paraview] Writer plugin?
In-Reply-To: <50320452A334BD42A5EC72BAD214509924EC0FF3@MBX110.d.ethz.ch>
References: <74D8CC62-B21B-454F-B299-CD6EFF258801@kitware.com>
<50320452A334BD42A5EC72BAD214509924EC0FF3@MBX110.d.ethz.ch>
Message-ID: <088440AE-FAFF-4519-BDEE-CB20D133CD34@kitware.com>
Hi John,
> I used to make my writers the same as filters ...
> Adding the writer as a filter is an easy option!
Thanks! Changing the ProxyGroup to "filters" and the WriterProxy element to a SourceProxy seems to have worked. I still want to understand why I can't expose it as a writer, but at least I can move on to the actual work.
David
From david.thompson at kitware.com Thu Jan 29 12:51:59 2015
From: david.thompson at kitware.com (David Thompson)
Date: Thu, 29 Jan 2015 12:51:59 -0500
Subject: [Paraview] Writer plugin?
In-Reply-To: <CANjZAi8zwraCVfGs=j3Xz3Xf=gGRW8rmmqR8CTadgbrqF6yFJg@mail.gmail.com>
References: <74D8CC62-B21B-454F-B299-CD6EFF258801@kitware.com>
<50320452A334BD42A5EC72BAD214509924EC0FF3@MBX110.d.ethz.ch>
<CANjZAi8zwraCVfGs=j3Xz3Xf=gGRW8rmmqR8CTadgbrqF6yFJg@mail.gmail.com>
Message-ID: <2471A57D-4799-4F59-8D44-D5FB488CF59B@kitware.com>
Hi David
> <InputProperty name="Input" command="SetInputConnection">
> <ProxyGroupDomain name="groups">
> <Group name="sources"/>
> <Group name="filters"/>
> </ProxyGroupDomain>
>
> ?
Nope.
Thanks,
David
From insley at anl.gov Thu Jan 29 15:29:03 2015
From: insley at anl.gov (Insley, Joseph A.)
Date: Thu, 29 Jan 2015 20:29:03 +0000
Subject: [Paraview] .cube files in pvbatch
Message-ID: <059D8F98-73D2-4246-9B48-47E2EDE094D7@anl.gov>
Hi,
I am trying to render a gaussian cube file using pvbatch, and am not having much luck. Using the GUI, I load a .cube file, and apply the contour filter to the Gridded Data portion of the file. I can save the state as a pvsm and reload that state using the GUI, and things work as expected. If I instead save as a python state file, and run pvbatch with that state file, the contour is not rendered. I suspect that this has something to do with the fact that in the pipeline browser the cube file has two outputs (called Output and Gridded Data), and pvbatch is somehow applying the contour filter to the wrong one.
I tried doing the following, which I thought should select output port 1 instead of output port 0, and indeed when I print them, I see different addresses, but the contour is still not being rendered. Does anyone have any advice?
bk2_cube = GaussianCubeReader( guiName="bk2.cube", FileName='/sandbox/bk2.cube' )
print "bk2_cube: ", bk2_cube
cube_port1=servermanager.OutputPort(bk2_cube, 1)
print "cube_port1: ", cube_port1
Thanks,
joe
From jfavre at cscs.ch Fri Jan 30 03:18:02 2015
From: jfavre at cscs.ch (Favre Jean)
Date: Fri, 30 Jan 2015 08:18:02 +0000
Subject: [Paraview] .cube files in pvbatch
In-Reply-To: <059D8F98-73D2-4246-9B48-47E2EDE094D7@anl.gov>
References: <059D8F98-73D2-4246-9B48-47E2EDE094D7@anl.gov>
Message-ID: <0EB9B6375711A04B820E6B6F5CCA9F6831792218@MBX111.d.ethz.ch>
try this:
bk2_cube = GaussianCubeReader( guiName="bk2.cube", FileName='/sandbox/bk2.cube' )
contour1 = Contour(Input=servermanager.OutputPort(bk2_cube, 1))
-----------------
Jean/CSCS
From eleonorapiersanti at yahoo.it Fri Jan 30 05:26:47 2015
From: eleonorapiersanti at yahoo.it (Eleonora Piersanti)
Date: Fri, 30 Jan 2015 10:26:47 +0000 (UTC)
Subject: [Paraview] Gradient of 2D velocity field with paraview
Message-ID: <1146413470.3003188.1422613607955.JavaMail.yahoo@mail.yahoo.com>
Hi to everyone!I computed with finite elements a 2D velocity field. I plotted without any problem the velocity field with paraview. I would like to compute the gradient.
I tried Filters->Gradient of Unstructured Data Set but without succes.Can you help me?Thanks,
Nora
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From eleonorapiersanti at yahoo.it Fri Jan 30 05:30:06 2015
From: eleonorapiersanti at yahoo.it (Eleonora Piersanti)
Date: Fri, 30 Jan 2015 10:30:06 +0000 (UTC)
Subject: [Paraview] Gradient of 2D velocity field with paraview
In-Reply-To: <1146413470.3003188.1422613607955.JavaMail.yahoo@mail.yahoo.com>
References: <1146413470.3003188.1422613607955.JavaMail.yahoo@mail.yahoo.com>
Message-ID: <1116668197.3043811.1422613807035.JavaMail.yahoo@mail.yahoo.com>
Hi to everyone!I computed with finite elements a 2D velocity field. I plotted without any problem the velocity field with paraview. I would like to compute the gradient.
I tried Filters->Gradient of Unstructured Data Set but without succes.Can you help me?Thanks,
Nora
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From andy.bauer at kitware.com Fri Jan 30 05:59:40 2015
From: andy.bauer at kitware.com (Andy Bauer)
Date: Fri, 30 Jan 2015 05:59:40 -0500
Subject: [Paraview] Gradient of 2D velocity field with paraview
In-Reply-To: <1146413470.3003188.1422613607955.JavaMail.yahoo@mail.yahoo.com>
References: <1146413470.3003188.1422613607955.JavaMail.yahoo@mail.yahoo.com>
Message-ID: <CAMaOp+Gb-XQjM0-dakpoFOTuknyhMfuDpT_7+Uc403fs09mW7w@mail.gmail.com>
Your description is a bit vague to diagnose the issue. Can you share your
data set? I was able to use the Wavelet source, use the Slice filter and
then use the Gradient of Unstructured Data Set without any issues. Can you
see if that works for you?
Regards,
Andy
On Fri, Jan 30, 2015 at 5:26 AM, Eleonora Piersanti <
eleonorapiersanti at yahoo.it> wrote:
> Hi to everyone!
> I computed with finite elements a 2D velocity field. I plotted without any
> problem the velocity field with paraview. I would like to compute the
> gradient.
> I tried Filters->Gradient of Unstructured Data Set but without succes.
> Can you help me?
> Thanks,
> Nora
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From eleonorapiersanti at yahoo.it Fri Jan 30 06:25:42 2015
From: eleonorapiersanti at yahoo.it (Eleonora Piersanti)
Date: Fri, 30 Jan 2015 11:25:42 +0000 (UTC)
Subject: [Paraview] Gradient of 2D velocity field with paraview
In-Reply-To: <2090024728.3074304.1422616575935.JavaMail.yahoo@mail.yahoo.com>
References: <CAMaOp+Gb-XQjM0-dakpoFOTuknyhMfuDpT_7+Uc403fs09mW7w@mail.gmail.com>
<2090024728.3074304.1422616575935.JavaMail.yahoo@mail.yahoo.com>
Message-ID: <61574486.3061471.1422617142852.JavaMail.yahoo@mail.yahoo.com>
Thank you for the answer.I think that the dimension of the .vtk file was too big. You can download the .vtk file from:
https://www.dropbox.com/s/o1wjo2brsaeu5ag/stability_realEigU_up0.vtk.tar.gz?dl=0
In which sense should I use the Slice filter? Sorry but I am quite new with paraview.Kind regards,Eleonora? Il Venerd? 30 Gennaio 2015 11:16, Eleonora Piersanti <eleonorapiersanti at yahoo.it> ha scritto:
Thank you, for the answer.I attach the .vtk file. In which sense should I use the Slice filter? Sorry but I am quite new with paraview.Kind regards,Eleonora
Il Venerd? 30 Gennaio 2015 10:59, Andy Bauer <andy.bauer at kitware.com> ha scritto:
Your description is a bit vague to diagnose the issue. Can you share your data set? I was able to use the Wavelet source, use the Slice filter and then use the Gradient of Unstructured Data Set without any issues. Can you see if that works for you?
Regards,
Andy
On Fri, Jan 30, 2015 at 5:26 AM, Eleonora Piersanti <eleonorapiersanti at yahoo.it> wrote:
Hi to everyone!I computed with finite elements a 2D velocity field. I plotted without any problem the velocity field with paraview. I would like to compute the gradient.
I tried Filters->Gradient of Unstructured Data Set but without succes.Can you help me?Thanks,
Nora
_______________________________________________
Powered by www.kitware.com
Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
Search the list archives at: http://markmail.org/search/?q=ParaView
Follow this link to subscribe/unsubscribe:
http://public.kitware.com/mailman/listinfo/paraview
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From andy.bauer at kitware.com Fri Jan 30 06:43:35 2015
From: andy.bauer at kitware.com (Andy Bauer)
Date: Fri, 30 Jan 2015 06:43:35 -0500
Subject: [Paraview] Gradient of 2D velocity field with paraview
In-Reply-To: <61574486.3061471.1422617142852.JavaMail.yahoo@mail.yahoo.com>
References: <CAMaOp+Gb-XQjM0-dakpoFOTuknyhMfuDpT_7+Uc403fs09mW7w@mail.gmail.com>
<2090024728.3074304.1422616575935.JavaMail.yahoo@mail.yahoo.com>
<61574486.3061471.1422617142852.JavaMail.yahoo@mail.yahoo.com>
Message-ID: <CAMaOp+GovES3_x1mxjTCrN5GUVsd9U0rWn-e_rR4ALr8R4_0ig@mail.gmail.com>
It looks like the Gradient of Unstructured Data Set filter isn't working
properly with quadratic triangles. Try using the Extract Surface filter
before computing gradients to convert them into linear triangles.
If you want to get more familiar with using ParaView, the ParaView tutorial
at http://www.paraview.org/Wiki/The_ParaView_Tutorial is a good place to
start.
Regards,
Andy
On Fri, Jan 30, 2015 at 6:25 AM, Eleonora Piersanti <
eleonorapiersanti at yahoo.it> wrote:
> Thank you for the answer.
> I think that the dimension of the .vtk file was too big. You can download
> the .vtk file from:
>
>
> https://www.dropbox.com/s/o1wjo2brsaeu5ag/stability_realEigU_up0.vtk.tar.gz?dl=0
>
> In which sense should I use the Slice filter? Sorry but I am quite new
> with paraview.
> Kind regards,
> Eleonora
>
> Il Venerd? 30 Gennaio 2015 11:16, Eleonora Piersanti <
> eleonorapiersanti at yahoo.it> ha scritto:
>
>
> Thank you, for the answer.
> I attach the .vtk file. In which sense should I use the Slice filter?
> Sorry but I am quite new with paraview.
> Kind regards,
> Eleonora
>
>
> Il Venerd? 30 Gennaio 2015 10:59, Andy Bauer <andy.bauer at kitware.com>
> ha scritto:
>
>
> Your description is a bit vague to diagnose the issue. Can you share your
> data set? I was able to use the Wavelet source, use the Slice filter and
> then use the Gradient of Unstructured Data Set without any issues. Can you
> see if that works for you?
>
> Regards,
> Andy
>
> On Fri, Jan 30, 2015 at 5:26 AM, Eleonora Piersanti <
> eleonorapiersanti at yahoo.it> wrote:
>
> Hi to everyone!
> I computed with finite elements a 2D velocity field. I plotted without any
> problem the velocity field with paraview. I would like to compute the
> gradient.
> I tried Filters->Gradient of Unstructured Data Set but without succes.
> Can you help me?
> Thanks,
> Nora
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
>
>
>
>
>
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From martin.huartee at gmail.com Fri Jan 30 10:09:32 2015
From: martin.huartee at gmail.com (Martin Huarte Espinosa)
Date: Fri, 30 Jan 2015 09:09:32 -0600
Subject: [Paraview] Fwd: Visualization in ParaView/VisIt
In-Reply-To: <54CA551C.5010306@gmail.com>
References: <CABY5g+sZYVEPawFvVifm_rUL=nNdRKjkxJ0hKFUN9uvoogYqPg@mail.gmail.com>
<54CA551C.5010306@gmail.com>
Message-ID: <CABY5g+tScq8MeovL2krjn5VmF9uwKJZ8h30AhfogD6kgBUmW1Q@mail.gmail.com>
Thanks Armin.
Martin.
On Thu, Jan 29, 2015 at 9:43 AM, Armin Wehrfritz <dkxls23 at gmail.com> wrote:
> I just stumbled across this interesting blog:
> http://berkgeveci.github.io/2015/01/08/h5py-writer-reader/
>
> If you have some kind of python knowledge, especially the "HDF5Reader"
> part should be very interesting for you.
> For this you don't even need the XDMF files.
>
> -Armin
>
>
>
> On 01/28/2015 10:55 PM, Martin Huarte Espinosa wrote:
>
>> Dear Armin and Dave: thanks for your replies. I will try.
>>
>> Martin.
>>
>> On Wed, Jan 28, 2015 at 2:30 PM, Armin Wehrfritz <dkxls23 at gmail.com
>> <mailto:dkxls23 at gmail.com>> wrote:
>>
>> For such kind of data I typically write a custom made XDMF [1] file.
>> XDMF is basically a XML wrapper that contains the description of the
>> HDF5 data file.
>> What comes in handy in your cases, is that you have the heavy data
>> already in a HDF5 file.
>>
>> I typically write the XDMF file with a hand crafted python script
>> since I typically deal with data sets from various source.
>> However, there is also a XDMF library [2,3], which should provide
>> some convenient advantages.
>>
>> The XDMF file format is very well supported by ParaView, or VisIt
>> for that matter.
>>
>> I attached 2 XDMF files, so you get an idea what I'm talking of (the
>> HDF5 data files are missing though).
>>
>> -Armin
>>
>> [1] http://www.xdmf.org/index.php/__Main_Page
>> <http://www.xdmf.org/index.php/Main_Page>
>> [2] http://www.xdmf.org/index.php/__Get_Xdmf
>> <http://www.xdmf.org/index.php/Get_Xdmf>
>> [3] http://www.xdmf.org/index.php/__Write_Xdmf
>>
>> <http://www.xdmf.org/index.php/Write_Xdmf>
>>
>>
>>
>> On 01/28/2015 09:52 PM, Mart?n Huarte E wrote:
>>
>> Dear Paraview community: Good day. I need assistance on
>> visualizing a
>> matlab file? Any tips will be greatly appreciated. Thanks.
>>
>>
>> Details:
>> I need to visualize temperature distribution in a volume. The
>> volume is
>> a wedge-like slice of a hollow cylinder (shown in the attached
>> schematic).
>>
>> The calculations are made in MATLAB. The three-dimensional
>> matrices of
>> the solution (T) and the node-coordinates (X, Y and Z) are saved
>> in a
>> HDF5 file.
>>
>> So far, I have not been able to make ParaView to visualize the
>> result in
>> the actual geometry. They get the length, width and height of
>> the volume
>> and simply build a cuboid out of them.
>>
>> Thanks
>>
>> My best, Mart?n
>> __
>> /Mart?n Huarte-Espinosa, Ph.D./
>> /Computational Physicist - //High Performance Computing
>> Specialist/
>> /linkedin.com/pub/martin-__huarte-espinosa/59/6b7/13a
>> <http://linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a>
>> <http://linkedin.com/pub/__martin-huarte-espinosa/59/6b7/__13a
>> <http://linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a>>/
>>
>>
>>
>>
>>
>> _________________________________________________
>> Powered by www.kitware.com <http://www.kitware.com>
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/__opensource/opensource.html
>> <http://www.kitware.com/opensource/opensource.html>
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/__ParaView
>> <http://paraview.org/Wiki/ParaView>
>>
>> Search the list archives at:
>> http://markmail.org/search/?q=__ParaView
>> <http://markmail.org/search/?q=ParaView>
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/__mailman/listinfo/paraview
>> <http://public.kitware.com/mailman/listinfo/paraview>
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com <http://www.kitware.com>
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>>
>>
>> --
>>
>> My best, Mart?n
>> __
>> /Mart?n Huarte-Espinosa, Ph.D./
>> /Computational Physicist - //High Performance Computing Specialist/
>> /linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a
>> <http://linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a>/
>>
>
--
My best, Mart?n
*Mart?n Huarte-Espinosa, Ph.D.*
*Computational Physicist - **High Performance Computing Specialist*
*linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a
<http://linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a>*
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From kmorel at sandia.gov Fri Jan 30 10:22:41 2015
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Fri, 30 Jan 2015 15:22:41 +0000
Subject: [Paraview] Average data from multiple nodes
In-Reply-To: <0b2faf9e0c1d4697844feeef84eef2cc@ES05AMSNLNT.srn.sandia.gov>
References: <0b2faf9e0c1d4697844feeef84eef2cc@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <86DD6C00-A00C-4B01-98EF-0F5E8E927100@sandia.gov>
Alan,
Try selecting the points you want and then plot the selection over time. I think the current version of plot selection over time creates a series for the average value of the selection.
-Ken
Sent from my iPad so blame autocorrect.
On Jan 23, 2015, at 1:45 PM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov>> wrote:
I was wondering if there was a tool that could average values from multiple nodes and plot that over time. For example, I would like to take a selection of nodes, average their velocities, and plot that vs. time.
Thanks for the help.
Alan
_______________________________________________
Powered by www.kitware.com<http://www.kitware.com>
Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
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From insley at anl.gov Fri Jan 30 11:11:02 2015
From: insley at anl.gov (Insley, Joseph A.)
Date: Fri, 30 Jan 2015 16:11:02 +0000
Subject: [Paraview] .cube files in pvbatch
In-Reply-To: <0EB9B6375711A04B820E6B6F5CCA9F6831792218@MBX111.d.ethz.ch>
References: <059D8F98-73D2-4246-9B48-47E2EDE094D7@anl.gov>
<0EB9B6375711A04B820E6B6F5CCA9F6831792218@MBX111.d.ethz.ch>
Message-ID: <462E438B-09BB-4C94-A500-FDDB347C223D@anl.gov>
Success! Thanks, Jean.
joe
On Jan 30, 2015, at 2:18 AM, Favre Jean <jfavre at cscs.ch> wrote:
> try this:
>
> bk2_cube = GaussianCubeReader( guiName="bk2.cube", FileName='/sandbox/bk2.cube' )
>
> contour1 = Contour(Input=servermanager.OutputPort(bk2_cube, 1))
> -----------------
> Jean/CSCS
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
From mike.jackson at bluequartz.net Fri Jan 30 11:51:03 2015
From: mike.jackson at bluequartz.net (Michael Jackson)
Date: Fri, 30 Jan 2015 11:51:03 -0500
Subject: [Paraview] Memory use with Xdmf files
Message-ID: <CAEqXkzeGkN0dPopVrk3BzBP4rT9GPddQ2Fx_Y5+d9pFbW88xDA@mail.gmail.com>
I have written an Xdmf file that uses the 3D CoRectMesh to display a
montage of 54 gray scale images. They are laid out in a 9x6 fashion. Each
Image is about 1292x968 pixels. We have run stitching algorithms on the
images to find their correct coordinates in XYZ space so that they will
form the montage correctly.
The raw amount of memory is 67,535,424 bytes. If that has to be as RGBA for
rendering then it is 270,141,696 bytes.
Then ParaView has to create a "cell" for each pixel and then some other
stuff. At one point ParaView spiked to 120GB of RAM and then fell back to
about 36GB of RAM. This seems a bit excessive to me. This is with ParaView
4.3.1 on a Windows 8.1 workstation. Am I doing something wrong? Just seems
like a lot of memory.
Are their alternate ways of writing the Xdmf file so that each image is a
single cell perhaps?
Thanks for any insights.
I can make the data set available to anyone who needs it.
_________________________________________________________
Mike Jackson mike.jackson at bluequartz.net
BlueQuartz Software www.bluequartz.net
Principal Software Engineer Dayton, Ohio
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From eleonorapiersanti at yahoo.it Fri Jan 30 12:32:27 2015
From: eleonorapiersanti at yahoo.it (Eleonora Piersanti)
Date: Fri, 30 Jan 2015 17:32:27 +0000 (UTC)
Subject: [Paraview] Gradient of 2D velocity field with paraview
In-Reply-To: <CAMaOp+GovES3_x1mxjTCrN5GUVsd9U0rWn-e_rR4ALr8R4_0ig@mail.gmail.com>
References: <CAMaOp+GovES3_x1mxjTCrN5GUVsd9U0rWn-e_rR4ALr8R4_0ig@mail.gmail.com>
Message-ID: <1151423439.3278662.1422639147617.JavaMail.yahoo@mail.yahoo.com>
Thank you so much! It seems to really work! :)Just out of curiosity, what Extract surface filter does? Since velocity is approximated with quadratic elements, do I loose accouracy using Extract surface filter?? Kind regards,Eleonora
Il Venerd? 30 Gennaio 2015 11:48, Andy Bauer <andy.bauer at kitware.com> ha scritto:
It looks like the Gradient of Unstructured Data Set filter isn't working properly with quadratic triangles. Try using the Extract Surface filter before computing gradients to convert them into linear triangles.
If you want to get more familiar with using ParaView, the ParaView tutorial at http://www.paraview.org/Wiki/The_ParaView_Tutorial is a good place to start.
Regards,
Andy
On Fri, Jan 30, 2015 at 6:25 AM, Eleonora Piersanti <eleonorapiersanti at yahoo.it> wrote:
Thank you for the answer.I think that the dimension of the .vtk file was too big. You can download the .vtk file from:
https://www.dropbox.com/s/o1wjo2brsaeu5ag/stability_realEigU_up0.vtk.tar.gz?dl=0
In which sense should I use the Slice filter? Sorry but I am quite new with paraview.Kind regards,Eleonora? Il Venerd? 30 Gennaio 2015 11:16, Eleonora Piersanti <eleonorapiersanti at yahoo.it> ha scritto:
Thank you, for the answer.I attach the .vtk file. In which sense should I use the Slice filter? Sorry but I am quite new with paraview.Kind regards,Eleonora
Il Venerd? 30 Gennaio 2015 10:59, Andy Bauer <andy.bauer at kitware.com> ha scritto:
Your description is a bit vague to diagnose the issue. Can you share your data set? I was able to use the Wavelet source, use the Slice filter and then use the Gradient of Unstructured Data Set without any issues. Can you see if that works for you?
Regards,
Andy
On Fri, Jan 30, 2015 at 5:26 AM, Eleonora Piersanti <eleonorapiersanti at yahoo.it> wrote:
Hi to everyone!I computed with finite elements a 2D velocity field. I plotted without any problem the velocity field with paraview. I would like to compute the gradient.
I tried Filters->Gradient of Unstructured Data Set but without succes.Can you help me?Thanks,
Nora
_______________________________________________
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Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
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From wascott at sandia.gov Fri Jan 30 13:04:42 2015
From: wascott at sandia.gov (Scott, W Alan)
Date: Fri, 30 Jan 2015 18:04:42 +0000
Subject: [Paraview] Average data from multiple nodes
In-Reply-To: <86DD6C00-A00C-4B01-98EF-0F5E8E927100@sandia.gov>
References: <0b2faf9e0c1d4697844feeef84eef2cc@ES05AMSNLNT.srn.sandia.gov>
<86DD6C00-A00C-4B01-98EF-0F5E8E927100@sandia.gov>
Message-ID: <b4ad0773edb64bacaafcbcdd8b92eb03@ES05AMSNLNT.srn.sandia.gov>
Ken,
I don't think that works. Try the following:
can.exo.
select a few dozen points. plot selection over time. apply.
Notice that it only shows the first point. Select multiple points. (this now works).
You never get an average.
Alan
From: Moreland, Kenneth
Sent: Friday, January 30, 2015 8:23 AM
To: Scott, W Alan
Cc: paraview at paraview.org
Subject: Re: [Paraview] Average data from multiple nodes
Alan,
Try selecting the points you want and then plot the selection over time. I think the current version of plot selection over time creates a series for the average value of the selection.
-Ken
Sent from my iPad so blame autocorrect.
On Jan 23, 2015, at 1:45 PM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov>> wrote:
I was wondering if there was a tool that could average values from multiple nodes and plot that over time. For example, I would like to take a selection of nodes, average their velocities, and plot that vs. time.
Thanks for the help.
Alan
_______________________________________________
Powered by www.kitware.com<http://www.kitware.com>
Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
Search the list archives at: http://markmail.org/search/?q=ParaView
Follow this link to subscribe/unsubscribe:
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From omid.mahabadi at geomechanica.com Fri Jan 30 14:38:45 2015
From: omid.mahabadi at geomechanica.com (Omid Mahabadi)
Date: Fri, 30 Jan 2015 14:38:45 -0500
Subject: [Paraview] ParaView Seg Faults when running Animation in a
Programmable Filter
In-Reply-To: <54C97E84.80003@geomechanica.com>
References: <54C97E84.80003@geomechanica.com>
Message-ID: <54CBDDC5.4070409@geomechanica.com>
After a lot of debugging, it turns out the issue is with the SetCells
function of the vtk unstructured grid. Below are the bits of my
Programmable Filter code that are relevant to the seg fault:
output = self.GetOutputDataObject(0)
cellArray = vtk.vtkCellArray()
cellTypes = []
# Create a polygon to display the selected points
polygon = vtk.vtkPolygon()
polygon.GetPoints().DeepCopy(pointArray)
polygon.GetPointIds().SetNumberOfIds(len(coordinates))
for i in range(len(coordinates)):
polygon.GetPointIds().SetId(i, coordinates[i][0])
# Add the polygon to a list of Cells
cellArray.InsertNextCell(polygon)
cellTypes.append(vtk.VTK_POLYGON)
# Get the cell containing a given cell & add it to the cellArray
selectedCell = input.GetCell(cellID)
cellArray.InsertNextCell(selectedCell)
cellTypes.append(vtk.VTK_TETRA)
# SetCells of the output with only the selected analyzed cells
output.SetCells(cellTypes, cellArray)
The last line above seg faults on one of my computers but not on the
other one, both using Linux Mint 15 OS, and similar versions of
ParaView. Any thoughts?
On 15-01-28 07:27 PM, Omid Mahabadi wrote:
> Hi,
> I've been experiencing a very weird seg faults in various versions of
> ParaView (4.1.x, 4.2.0, 4.3.x) when running an animation (streaming
> over time) of my Programmable Filter. I'm not even sure this is a
> ParaView issue, but I'll still share my story in case someone has any
> insights that they can kindly share.
>
> My Programmable Filter code works fine for the Current time step,
> regardless at which time step I run it (i.e., hit the Apply button of
> the Programmable Filter). However, when I hit the Play button to loop
> over time steps (which appends some information to a CSV file),
> ParaView seg faults after reaching the /3rd time step/. The filter has
> been working for some time and this started to happen all of a sudden,
> without any system update.
>
> It may be related to a weird combination of hardware, software, and
> drivers. My script works fine on a desktop computer I have but it seg
> faults on my main workstation, which has an AMD/ATI Radeon R9 280x GPU
> running on Linux Mint 15, 64-bit. When I completely removed the AMD
> drivers, it still seg faulted but after reaching the /6th time step/
> after the current one. Then, I launched an Ubuntu 14.04 LTS 64-bit,
> live on a USB flash drive. The script in Programmable Filter worked
> perfectly fine. As a result, I installed the OS, but it acted up
> exactly as the Linux Mint installation.
>
> The input files are massive vtk unstructured grids (about 800 MB
> each). I created smaller files, but unfortunately I couldn't reproduce
> the error. But I'm fairly sure that the files are not corrupted. As
> such, I can't send out the files that cause the issue. I also
> monitored the memory usage using free -h command while Playing. Here's
> the output for the "-/+ buffers/cache" line:
>
> total used free
> -/+ buffers/cache: 7.2G 8.4G (Opening the .vtu files)
> -/+ buffers/cache: 7.2G 8.4G
> -/+ buffers/cache: 7.4G 8.2G
> -/+ buffers/cache: 7.6G 8.0G
> -/+ buffers/cache: 7.6G 8.0G
> -/+ buffers/cache: 7.6G 8.0G
> -/+ buffers/cache: 7.9G 7.7G
> -/+ buffers/cache: 8.3G 7.4G
> -/+ buffers/cache: 8.5G 7.1G
> -/+ buffers/cache: 8.6G 7.0G
> -/+ buffers/cache: 8.5G 7.1G
> -/+ buffers/cache: 8.5G 7.1G
> -/+ buffers/cache: 8.5G 7.1G
> -/+ buffers/cache: 8.5G 7.1G
> -/+ buffers/cache: 8.6G 7.0G
> -/+ buffers/cache: 8.9G 6.7G
> -/+ buffers/cache: 9.1G 6.5G
> -/+ buffers/cache: 9.3G 6.3G
> -/+ buffers/cache: 9.4G 6.2G (Seg faults here)
> -/+ buffers/cache: 7.0G 8.6G
>
> As you can see, my system still had a lot of free memory when the seg
> fault happened and I haven't done anything explicitly to limit memory
> usage by a single process.
>
> Looking at syslog, this is the error message for the seg fault:
>
> kernel: [77995.911073] paraview[22483]: segfault at 7f3c8e0398ac
> ip 00007f3a47ebe169 sp 00007fff9106ab50 error 4 in
> fglrx_dri.so[7f3a479e9000+21e9000]
>
>
> Am I missing something here? Is there any other debugging steps I
> should take? Any insights or help will be hugely appreciated.
>
> Thank you,
> Omid
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
--
Omid Mahabadi, Ph.D.
Geomechanica, Inc.
http://www.geomechanica.com/
Tel : +1-647-478-9767
Cell: +1-416-824-2408
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From kmorel at sandia.gov Fri Jan 30 18:21:46 2015
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Fri, 30 Jan 2015 23:21:46 +0000
Subject: [Paraview] Average data from multiple nodes
In-Reply-To: <b4ad0773edb64bacaafcbcdd8b92eb03@ES05AMSNLNT.srn.sandia.gov>
References: <0b2faf9e0c1d4697844feeef84eef2cc@ES05AMSNLNT.srn.sandia.gov>
<86DD6C00-A00C-4B01-98EF-0F5E8E927100@sandia.gov>
<b4ad0773edb64bacaafcbcdd8b92eb03@ES05AMSNLNT.srn.sandia.gov>
Message-ID: <D0F15F51.1988D%kmorel@sandia.gov>
Huh. I'm thinking of the behavior described in bug 0014940. When you make a query selection, you get statistics like average. When you make a surface selection (which is essentially an id selection) you get that first point. When you make a frustum selection, you get an error.
I would report this as a bug. I expect the plot selection over time to be consistent over all types of selection. And I would want the behavior to be as described in bug 0014945.
-Ken
From: <Scott>, Walter Scott <wascott at sandia.gov<mailto:wascott at sandia.gov>>
Date: Friday, January 30, 2015 at 11:04 AM
To: Kenneth Moreland <kmorel at sandia.gov<mailto:kmorel at sandia.gov>>
Cc: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: RE: [Paraview] Average data from multiple nodes
Ken,
I don't think that works. Try the following:
can.exo.
select a few dozen points. plot selection over time. apply.
Notice that it only shows the first point. Select multiple points. (this now works).
You never get an average.
Alan
From: Moreland, Kenneth
Sent: Friday, January 30, 2015 8:23 AM
To: Scott, W Alan
Cc: paraview at paraview.org<mailto:paraview at paraview.org>
Subject: Re: [Paraview] Average data from multiple nodes
Alan,
Try selecting the points you want and then plot the selection over time. I think the current version of plot selection over time creates a series for the average value of the selection.
-Ken
Sent from my iPad so blame autocorrect.
On Jan 23, 2015, at 1:45 PM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov>> wrote:
I was wondering if there was a tool that could average values from multiple nodes and plot that over time. For example, I would like to take a selection of nodes, average their velocities, and plot that vs. time.
Thanks for the help.
Alan
_______________________________________________
Powered by www.kitware.com<http://www.kitware.com>
Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
Search the list archives at: http://markmail.org/search/?q=ParaView
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From Hertzberg at Colorado.EDU Fri Jan 30 20:15:46 2015
From: Hertzberg at Colorado.EDU (Jean Hertzberg)
Date: Fri, 30 Jan 2015 18:15:46 -0700
Subject: [Paraview] Algorithm used for vorticity calculation
Message-ID: <C1449BEF40D5CC46B21272BB35290659CFFA4CE52C@EXC3.ad.colorado.edu>
Can anybody tell me exactly what algorithm is used to calculate vorticity in the Compute Derivatives filter? Is it a first or second order central difference scheme for gradients, or does it use the circulation method?
Thanks.
Jean Hertzberg
Dept. Mechanical Engineering
University of Colorado, Boulder
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From timcfagan at gmail.com Sat Jan 31 00:40:55 2015
From: timcfagan at gmail.com (timcfagan .)
Date: Sat, 31 Jan 2015 16:40:55 +1100
Subject: [Paraview] particle surface based on position
In-Reply-To: <CAMYd9p8uM-MO8k61Wq0gR0BVs+BCjTV=Vppztip_7RuXtT3-wQ@mail.gmail.com>
References: <CAMYd9p8uM-MO8k61Wq0gR0BVs+BCjTV=Vppztip_7RuXtT3-wQ@mail.gmail.com>
Message-ID: <CAMYd9p8KmTDo88jtTVQLyhT8fRujsVGQ-raN7hx+8XfryobuaA@mail.gmail.com>
I can generate surfaces but it seems none of them are based on particle
positions. Anyone know if this is part of paraview functionality?
On Wed, Jan 28, 2015 at 3:55 PM, timcfagan . <timcfagan at gmail.com> wrote:
> Is there a way for paraview to generate a surface based on point positions?
>
> Viewing particle data as a surface, it just shows the points. One way I
> have generated a "surface" is to use a contour by mass on nodal points. But
> this is a bit iffy as changing the mass threshold will add or remove parts
> of the surface.
>
> Attached is an image for both of these. The contour looks okay, but
> probably isn't the right way to go about it...
>
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From matt.mccormick at kitware.com Sat Jan 31 11:25:10 2015
From: matt.mccormick at kitware.com (Matt McCormick)
Date: Sat, 31 Jan 2015 11:25:10 -0500
Subject: [Paraview] [ITK-users] compile itk (VTKGlue ON) with vtk from
paraview
In-Reply-To: <54C8CFC2.4000305@mh-hannover.de>
References: <54C0CF2E.3060106@mh-hannover.de> <54C2125D.7090801@mh-hannover.de>
<CALzTN-SJcZYJT+twE_fXXWi7tyTe6u9JhFSGy1W03-C9PU-=LA@mail.gmail.com>
<54C6029C.4040600@mh-hannover.de>
<CALzTN-S8KLZcp30bLkdNEpTK8zR3L3xT6D--XhmF5JVjKngz6A@mail.gmail.com>
<54C8CFC2.4000305@mh-hannover.de>
Message-ID: <CALzTN-SEHwLwzO99QcL0JGVn4TZD2c=Tzpy+cB6KCXiEOBR60w@mail.gmail.com>
On Wed, Jan 28, 2015 at 7:02 AM, Dr. Roman Grothausmann
<grothausmann.roman at mh-hannover.de> wrote:
> Hi Matt,
>
> On 26/01/15 17:54, Matt McCormick wrote:
>> I do not think the Midas Journal will be able to build your plugin.
>
> OK, so I added a VTK test program. Is there a way to test if the automatic
> testing environment would be able to build and run my VTK test program
> BEFORE submitting the contribution to Midas?
> (My last submission never got tested by the system so far, i.e. there is no
> colde review reported:
> http://www.vtkjournal.org/browse/publication/949)
Unfortunately, the submission build system is currently opaque and
limited. We have many thoughts on how to improve the journal
infrastructure but lack the funding to implement it :-(.
>> I would recommend creating build instructions to build against a
>> ParaView build tree. I have just verified that ITK builds with the
>> ITKVtkGlue module ON when pointing VTK_DIR to the <ParaView-build>/VTK
>> directory.
>
> Did You use BUILD_SHARED_LIBS ON for both ITK and ParaView? ITK also
> compiles fine without any errors for me if I use BUILD_SHARED_LIBS OFF,
> however the problems then arise when compiling the plugin.
> If You like, You can test the compilation of the plugin with the code from
> the git repository:
> https://github.com/romangrothausmann/FacetAnalyser
Looks like a great project!
I was using BUILD_SHARED_LIBS for both. What issue were you seeing?
Again, I think the best approach is to build VTK separately, then
build both ParaView and ITK against that version.
HTH,
Matt
>
> On 26/01/15 17:54, Matt McCormick wrote:
>>
>> Hi Roman,
>>
>> Thanks for the update. Great to hear about the Midas Journal article!
>>
>> I do not think the Midas Journal will be able to build your plugin.
>>
>> I would recommend creating build instructions to build against a
>> ParaView build tree. I have just verified that ITK builds with the
>> ITKVtkGlue module ON when pointing VTK_DIR to the <ParaView-build>/VTK
>> directory.
>>
>> I don't see the install tree VTKTargets.cmake file in my ParaView
>> build, either. In the long term, the ParaView CMake configuration
>> should be corrected.
>>
>> HTH,
>> Matt
>>
>> On Mon, Jan 26, 2015 at 4:02 AM, Dr. Roman Grothausmann
>> <grothausmann.roman at mh-hannover.de> wrote:
>>>
>>> Hi Matt,
>>>
>>>
>>> Thank You very much for Your reply.
>>> I can only find one VTKTargets.cmake in
>>> /opt/compilation/paraview-git_build/VTK/
>>> It seems though that it is lacking the relevant entries for the libraries
>>> that troubled me, e.g. vtkPVPythonCatalyst and
>>> vtkUtilitiesPythonInitializer.
>>>
>>> I'm about to publish the ITK-VTK PV plugin in the Midas Journal, what
>>> installation instructions should I give there?
>>> Will the testing environment be able to compile this plugin and its tests
>>> or
>>> should I disable automatic testing for this contribution?
>>>
>>> Many thanks for looking into this.
>>> Roman
>>>
>>>
>>> On 23/01/15 18:15, Matt McCormick wrote:
>>>>
>>>>
>>>> Hi Roman,
>>>>
>>>> Thanks for looking into the issue and reporting it to the mailing list.
>>>>
>>>> Paraview should be installing VTKTargets.cmake, which tells the build
>>>> system where to find the libraries. Note that there might be two
>>>> VTKTargets.cmake files that are generated -- one for the build tree
>>>> and one for the install tree.
>>>>
>>>> HTH,
>>>> Matt
>>>>
>>>> On Fri, Jan 23, 2015 at 4:20 AM, Dr. Roman Grothausmann
>>>> <grothausmann.roman at mh-hannover.de> wrote:
>>>>>
>>>>>
>>>>>
>>>>> On 22/01/15 11:21, Dr. Roman Grothausmann wrote:
>>>>>>
>>>>>>
>>>>>>
>>>>>> Adding the abs. file locations to the build command does not help nor
>>>>>> does
>>>>>> -L/opt/paraview-4.3.1_git/lib/paraview-4.3/
>>>>>
>>>>>
>>>>>
>>>>>
>>>>> I figured that the vtk dynamic libraries of PV have the ending
>>>>> *-pv4.3.so
>>>>> which seems to be the reason why the linker does not find them. If I
>>>>> create
>>>>> symbolic links to these files without the extension:
>>>>>
>>>>> cd /opt/compilation/paraview-git_build/lib/
>>>>> for i in *-pv*.so; do ln -s $i ${i%-pv*}.so; done
>>>>>
>>>>> and adding -L/opt/compilation/paraview-git_build/lib/ to
>>>>> CMAKE_CXX_FLAGS
>>>>> the compilation of ITK succeeds.
>>>>>
>>>>> I wonder, is that the way it's meant to be done?
>>>>>
>>>>>
>>>>>
>>>>>> What am I missing in my configuration of PV and ITK?
>>>>>>
>>>>>> When and where should I specify:
>>>>>> CMAKE_CXX_FLAGS -fPIC
>>>>>> BUILD_SHARED_LIBS ON/OFF
>>>>>>
>>>>>> Is this the right VTK_DIR specification for ITK:
>>>>>> /opt/compilation/ParaView-v4.3.1/build/VTK
>>>>>> or
>>>>>> /opt/paraview-4.3.1_git/lib/cmake/paraview-4.3
>>>>>>
>>>>>>
>>>>>>
>>>>>> Many thanks for any help or hints.
>>>>>> Roman
>>>>>>
>>>>>>
>>>>>
>>>>> --
>>>>> Dr. Roman Grothausmann
>>>>>
>>>>> Tomographie und Digitale Bildverarbeitung
>>>>> Tomography and Digital Image Analysis
>>>>>
>>>>> Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
>>>>> Medizinische Hochschule Hannover
>>>>> Carl-Neuberg-Str. 1
>>>>> D-30625 Hannover
>>>>>
>>>>> Tel. +49 511 532-9574
>>>>> _____________________________________
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>>>>>
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>>>
>>>
>>>
>>> --
>>> Dr. Roman Grothausmann
>>>
>>> Tomographie und Digitale Bildverarbeitung
>>> Tomography and Digital Image Analysis
>>>
>>> Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
>>> Medizinische Hochschule Hannover
>>> Carl-Neuberg-Str. 1
>>> D-30625 Hannover
>>>
>>> Tel. +49 511 532-9574
>
>
> --
> Dr. Roman Grothausmann
>
> Tomographie und Digitale Bildverarbeitung
> Tomography and Digital Image Analysis
>
> Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
> Medizinische Hochschule Hannover
> Carl-Neuberg-Str. 1
> D-30625 Hannover
>
> Tel. +49 511 532-9574